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CONSTRUCTION OF METHOD FOR PROTEOMICS RESEARCH

Research Project

Project/Area Number 12470485
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical pharmacy
Research InstitutionTohoku University

Principal Investigator

GOTO Junichi  TOHOKU UNIVERSITY, GRADUATE SCHOOL OF PHARMACEUTICAL SCIENCES, PROFESSOR, 大学院・薬学研究科, 教授 (80006337)

Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥14,300,000 (Direct Cost: ¥14,300,000)
Fiscal Year 2001: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2000: ¥10,800,000 (Direct Cost: ¥10,800,000)
KeywordsProteomics / Affinity labeling / Post-genome / Mass spectrometry / Peroxiredoxin / Acyl adenylate / Imunoaffinity extraction / Differential display / イノムアフィニティー抽出 / プロテオーム / ボストゲノム / 蛋白付加体 / アシルグルクロニド / マスマッピング / モノクローナル抗体
Research Abstract

Gene can display its function owing to translate correspond to protein, and the post-translational modification of protein is involved in a functional expression. Proteome research is a new field, which is starting to have a major impact in the post-genome era. For reconstruction of life system, proteomics focuses the structural and functional analysis of proteins, which exchange their expression dynamically and interact to other biological active substances.
HeLa S3 cells were cultured with a medium containing 50 μM deoxycholic acid (DCA), and the effect of DCA stimulation to cells was investigated by the differential display. The clear protein expression change was observed in the cytosolic fraction, and the peptide fragments mixture was measured by MALDI-TOFMS on the heels of the in-gel digestion. According to the results using by peptide mass fingerprinting method, the interested protein was identified as peroxiredoxin I, which played an important role for the oxidative stress. On the other hand, an anti-DCA monoclonal antibody was produced using a DCA-bovine serum albumin immune complex. And it was immobilized to the agarose gel for production of immunoaffinity gel. The novel affinity labeling reagents, acyl adenylate and acyl 2-deoxyglucuronide, was developed for analysis of intramolecular interaction, and investigated their reactivity. The results indicated that the affinity labeling reagents developed could react selectively to interaction site on protein molecule by control of pH of reaction mixture. The peptide labeled DCA could be selectively extracted from enzyme digested peptide mixture using the immunoaffinity gel developed in this study.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] Shigeo Ikegawa: "Method for The Determination of The Hepatic Enzyme Activity Catalyzing Bile Acid Acyl Glucuronide Formation by High-Performance Liquid Chromatography with Pulsed Amperometric Detection"Biomedical Chromatography. 14. 144-150 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi: "A Monoclonal Antibody-Based Enzyme-Linked Immunosorbent Assay of Ursodeoxycholic Acid 3-Sulfates in Human Urine"Journal of Steroid Biochemistry & Molecular Biology. 72. 265-272 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi: "Production of A Monoclonal Antibody for Sensitive Monitoring of Deoxycholic Acid Residues Anchored on Endogenous Protyeins"Analytical Sciences. 16. 1133-1138 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi: "Monoclonal Antibodies Generated Against An Affinity-Labeled Immune Complex of An Anti-Bile Acid Metabolite Antibody : An Approach to Noncompetitive Hapten Immunoassays Based on Anti-Idiotype or Anti-Metatype Antibodies"Journal of Immunological Methods. 245. 95-108 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shigeo Ikegawa: "Production and Characterization of Monoclonal Antibodies Recognizing The Asymmetric Center of Optically Active Bufuralol and Its Metabolites"Analytical Sciences. 16. 31-35 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Junichi Goto: "Bile Acid Acyl Adenylate : A Possible Intermediate to Produce a Protein-Bound Bile Acid"Rapid Communication in Mass Spectrometry. 15. 104-109 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shigeo Ikegwa: "The Enantioselective Immunoaffinity Extraction of an Optically Active Ibuprofen-Modified Peptide Fragment"Analytical Biochemistry. 296. 63-72 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano: "Simultaneous Detection of Cholyl Adenylate and Coenzyme A Thioester Utilizing Liquid Chromatography/Electrospray Ionization Mass Spectrometry"Analytical Sciences. 17. 1037-1042 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Iida: "A Highly Efficient, Stereoselective Oxyfunctionalization of Unactivated Carbons in Steroids with Dimethyldioxirane"Journal of Chemical Society, Perkin Translation 1. 2001. 2229-2236 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano: "Characterization of Rat Liver Bile Acid Acyl Glucuronosyltransferase"Steroids. 67. 257-262 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Iida: "Potential Bile Acid Metabolites. 24. An Efficient Synthesis of Carboxyl Linked Glucosides"Lipids. 37. 101-110 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano: "Rapid and Simple Quantitative Assay Method for Diastereomeric Flurbiprofen Glucuronides in The Incubation Mixture"Journal of Chromatography B. (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shigeo Ikegawa, Junji Oohashi, Naoaki Murao, Junichi Goto: "A Method for The Determination of The Hepatic Enzyme Activity Catalyzing Bile Acid Acyl Glucuronide Formation by High- Performance Liquid Chromatography with Pulsed Amperometnc Detention."Biomedical Chromatography. 14. 144-150 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi, Hiroshi Katsumata, Hiroshi Katayama, Hiroyuki Oiwa, Junichi Goto, Yoshito Takeuchi: "A Monoclonal Antibody-Based Enzyme-Linked Immuiosorbent Assay of Ursodeoxycholic Acid 3-Sulfates in Human Urine"Journal of Steroid Biochemistry & Molecular Biology. 72. 265-272 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi, Hiroshi Katayama, Masanori Nagata, Junichi Goto: "Production of A Monoclonal Antibody for Sensitive Monitoring of Deoxycholic Acid Residues Anchroed on Endogenous Proteins."Analytical Sciences. 16. 1133-1138 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Norihiro Kobayashi, Hiroyuki Oiwa, Kazuyuki Kubota, Sachiko Sakoda, Junichi Goto: "Monoclonal Antibodies Generated Against An Affinity-Labeled Immune Complex of An Anti-Bile Acid Metabolite Antibody: An Approach to Noncompetitive Hapten Immunoassays Based on Anti-Idiotype or Anti-Metatype Antibodies"Journal of Immunological Methods. 245. 95-108 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shigeo Ikegawa, Ni Made Ria Isriyanthi, Norihiro Kobayashi, Shinichi Miyairi, Junichi Goto: "Production and Characterization of Monoclonal Antibodies Recognizing The Asymmetric Center of Optically Active Bufuralol and Its Metabolites."Analytical Sciences. 16. 31-35 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Junichi Goto, Masanori Nagata, Nariyasu Mano, Norihiro Kobayashi, Shigeo Ikegawa, Reiko Kiyonami: "Bile Acid Acyl Adenylate: A Possible Intermediate to Produce a Protein-Bound Bile Acid"Rapid Communications in Mass Spectrometry. 15. 104-109 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shigeo Ikegawa, Ni Made Ria Isriyanthi, Masanori Nagata, Kenji Yahata, Hiromi Ito, Nariyasu Mano, Junichi Goto: "The Enantioselective Immunoaffinity Extraction of An Optically Active Ibuprofen-Modified Peptide Fragment"Analytical Biochemistry. 296. 63-72 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano, Masashi Uchida, Hiroko Okuyama, Ikuko Sasaki, Shigeo Ikegawa, Junichi Goto: "Stimultaneous Detection of Cholyl Adenylate and Coenzyme A Thioester Utilizing Liquid Chromatography/Electrospray Ionization Mass Spectrometry."Analytical Sciences. 17. 1037-1042 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Iida, Takeru Yamaguchi, Ryusei Nakamon, Masahiro Hikosaka, Nariyasu Mano, Junichi Goto, Toshio Nambara: "A Highly Efficient, Stereoselective Oxyfunctionalization of Unactivated Carbons in Steroids with Dimethyldioxirane"Journal of Chemical Society, Perkin Translation 1. 2229-2236 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano, Koji Nishimura, Takashi Narui, Shigeo Ikegawa, Junichi Goto: "Characterization of Rat Liver Bile Acid Acyl Glucuronosyltransferase"Steloids. 67. 257-262 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Iida, Ryusei Nakamori, Satoru Yada, Yuzuru Takagi, Nariyasu Mano, Shigeo Ikegawa, Junichi Goto, Toshio Nambara: "Potential Bile Acid Metabolites. 24. An Efficient Synthesis of Carboxyl-Linked Glucosides."Lipids. 37. 101-110 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nariyasu Mano, Ayako Nikaido, Takashi Narui, Junichi Goto: "Rapid and Simple Quantitative Assay Method for Diastereomeric Flurbiprofen Glucuronides in The Incubation Mixture."Journal of Chromatography B. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Junichi Goto: "Bile Acid Acyl Adenylate : A Possible Intermediate to Produce a Protein-Bound Bile Acid"Rapid Communication in Mass Spectrometry. 15. 104-109 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Shigeo Ikegawa: "The Enantioselective Immunoaffinity Extraction of an Optically Active Ibuprofen-Modified Peptide Fragment"Analytical Biochemistry. 296. 63-72 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nariyasu Mano: "Simultaneous Detection of Cholyl Adenylate and Coenzyme A Thioester Utilizing Liquid Chromatography/Electrospray Ionization Mass Spectrometry"Analytical Sciences. 17. 1037-1042 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takashi Iida: "A Highly Efficient, Stereoselective Oxyfunctionalization of Unactivated Carbons in Steroids with Dimethyldioxirane"Journal of Chemical Society, Perkin Translation 1. 2001. 2229-2236 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nariyasu Mano: "Characterization of Rat Liver Bile Acid Acyl Glucuronosyltransferase"Steroids. 67. 257-262 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takashi Iida: "Potential Bile Acid Metabolites. 24. An Efficient Synthesis of Carboxyl-Linked Glucosides"Lipids. 37. 101-110 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nariyasu Mano: "Rapid and Simple Quantitative Assay Method for Diastereomeric Flurbiprofen Glucuronides in The Incubation Mixture"Journal of Chromatography B. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Norihiro Kobayashi: "Production of a monoclonal antibody for sensitive monitoring of deoxycholic acid residues anchored on endogenous proteins"Analytical Sciences. 16. 1133-1138 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Norihiro Kobayashi: "Monoclonal antibodies generated against an affinity-labeled immune complex of an anti-bile acid metabolite antibody : an approach to non competitive hapten immunoassays based on anti-idiotype or anti-metatype antibodies"Journal of Immunological Methods. 245. 95-108 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Junichi Goto: "Bile acid acyl adenylate : a possible intermediate to produce a protein-bound bile acid"Rapid Communications in Mass Spectrometry. 15. 104-109 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Shigeo Ikegawa: "Enantioselective immunoaffinity extraction of the peptide fragment modified with optically active ibuprofen using immobilized antibody"Analytical Biochemistry. (in press).

    • Related Report
      2000 Annual Research Report
  • [Publications] Nariyasu Mano: "Product inhibition of hepatic bile acid acyl glucuronosyltransferase"European Journal of Biochemistry. (in press).

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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