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Re-constitution of pre-RC complex

Research Project

Project/Area Number 12470499
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionOKAYAMA UNIVERSITY

Principal Investigator

MIZUSHIMA Tohru  OKAYAMA UNIVERSITY, Faculty of Pharmaceutical Sciences, Associate Professor, 薬学部, 助教授 (00264060)

Project Period (FY) 2000 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥14,000,000 (Direct Cost: ¥14,000,000)
Fiscal Year 2003: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2002: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2001: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2000: ¥3,800,000 (Direct Cost: ¥3,800,000)
KeywordsDNA Replication / ORC / ATP / ADP / ATPase / Cdc6 / ADP / 活性調和 / DnaA / 酸性リン脂質 / 機能ドメイン / 結晶構造解析
Research Abstract

Origin Recognition Complex (ORC), a possible initiator of chromosomal DNA replication in eukaryotes, binds to ATP through its subunits Orc1p and Orc5p. Orc1p possesses ATPase activity. As for DnaA, the E. coli initiator, the ATP-DnaA complex is active but the ADP-DnaA complex is inactive for DNA replication and therefore, the ATPase activity of DnaA inactivates the ATP-DnaA complex tp suppress the re-initiation of chromosomal DNA replication. In this study, we investigated ADP-binding to ORC by a filter-binding assay. The K_d values for ADP-binding to wild-type ORC and to ORC-1A (ORC containing Orc1p with a defective Walker A motif) were less than 10 nM, showing that Orc5p can bind to ADP with a high affinity, similar to ATP. ORC-SA (ORC containing Orc5p with a defective Walker A motif) did not bind to ADP, suggesting that ADP-Orc1p complex is too unstable to be detected by the filter-binding assay. ADP dissociated more rapidly from wild-type ORC and ORC-1A than ATP did. Origin DNA fragments did not stimulate ADP-binding to any types of ORC. In the presence of ADP, ORC could not bind to origin DNA in a sequence-specific manner. Thus in eukaryotes, the ADP-ORC complex may be unable to initiate chromosomal DNA replication, and in this it resembles the ADP-DnaA complex in prokaryotes. However, overall control may be different. In eukaryotes, the ADP-ORC complex is unstable, suggesting that ADP-ORC complex might rapidly become ATP-ORC complex ; whereas in prokaryotes, ADP remains bound to DnaA, keeping DnaA inactive, and preventing re-initiation for some periods.

Report

(5 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (41 results)

All Other

All Publications (41 results)

  • [Publications] Takahashi, N.: "Functions of sensor 1 and sensor 2 regions of Saccharomyces cerevisiae Cdc6p in vivo and in vitro."J.Biol.Chem..

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M: "Acidic phospholipids inhibit the DNA binding activity of DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli."Mol.Microbiol.. 46. 245-256 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Biochemical analysis on DnaA protein with mutations in both Arg328 and Lys372."Biochem.J.. 362. 453-458 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Lee, J.R: "Inhibitory effects of acidic phospholipids on the binding of Origin Recognition Complex to origin DNA."Biochem.J.. 362. 453-458 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Kinetics of ATP-binding to Origin Recognition Complex of Saccharomyces cerevisiae."J.Biol.Chem..

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Takahashi, N: "Analysis on Origin Recognition Complex containing Orc5p with defective Walker A motif."J.Biol.Chem.. (In press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mizushima, T.: "Site-directed mutational analysis of DnaA protein, the initiator of chromosomal DNA replication in E.coli."J.Biochem.. 127. 1-7 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Identification of amino acids involved in the functional interaction between DnaA protein and acidic phospholipids."J.Biol.Chem.. 275. 4513-4518 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kondo, T.: "Suppression of temperature-sensitivity of a dnaA46 mutant by higher DNA supercoiling."Biochem.J.. 348. 375-379 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Molecular mechanism for functional interaction between DnaA protein and acidic phospholipids ; identification of important amino acids."J.Biol.Chem.. 276. 7450-7456 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Biochemical analysis on DnaA protein with mutations in both Arg328 and Lys372."Biochem.J.. 362. 453-458 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Sequence-independent DNA binding activity of DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli."J.Biochem.. 131. 419-425 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mima, S.: "Conserved hydrophobic amino acid residues in the N-terminal region of DnaA protein are involved in DnaA-DnaA interaction."Biochem.J.. 365. 881-887 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Koterasawa, M.: "Mutational analysis on conserved hydrophobic amino acid residues in the N-terminal region of DnaA protein."Biol.Pharm.Bull.. 25. 913-915 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Acidic phospholipids inhibit the DNA binding activity of DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli."Mol.Microbiol.. 46. 245-256 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Kinetics of ATP-binding to Origin Recognition Complex of Saccharomyces cerevisiae."J.Biol.Chem.. 278(47). 46440-46445 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Takahashi, N.: "Analysis on Origin Recognition Complex containing Orc5p with defective Walker A motif."J.Biol.Chem.. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makise, M.: "Kinetics of ATP-binding to Origin Recognition Complex of Saccharomyces cerevisiae."J.Biol.Chem.. 278. 46440-46445 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takahashi, N.: "Analysis on Origin Recognition Complex containing Orc5p with defective Walker A motif."J.Biol.Chem.. (in press).

    • Related Report
      2003 Annual Research Report
  • [Publications] Hoshino, T: "Prostaglandin E_2 protects gastric mucosal cells from apoptosis via EP_2 and EP_4 receptor activation."J.Biol.Chem.. 278. 12752-12758 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Mizushima, T.: "Protection of gastric mucosal cells from apoptosis and necrosis by induction of HSP and PGE_2"Jpn.J.Hyperthermic Oncol.. 19. 67-78 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tsutsumi, S.: "Molecular mechanism of adaptive cytoprotection induced by ethanol in human gastric cells."Exp.Biol.Med.. 228. 1089-1095 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sekiya, H.: "Functional cloning and characterization of a multidrug efflux pump, MexHI-OpmD, from a Pseudomonas aeruginosa mutant."Antimicrob.Agents Chemother.. 47. 2990-2992 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hoshino, T.: "Prostaglandin E_2 protects gastric mucosal cells from apoptosis via EP_2 and EP_4 receptor activation"J.Biol.Chem.. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Takahashi, N.: "Functions of sensor I and sensor 2 regions of Saccharomyces cerevisiae Cdc6p in vivo and in vitro"J.Biol.Chem.. 277. 16033-16040 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Makise, M.: "Acidic phospholipids inhibit the DNA binding activity of DnaA protein, the initiator of chromosomal DNA replication in Excherichia coli"Mol.Microbiol.. 46. 245-256 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Lee, J.R.: "Inhibitory effects of acidic phospholipids on the binding of Origin Recognition Complex to origin DNA"Biochem.J.. 362. 395-399 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Makise, M.: "Biochemical analysis on DnaA protein with mutations in both Arg328 and Lys372"Biochem.J.. 362. 453-458 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Mima, S.: "Conserved hydrophobic amino acid residues in the N-terminal region of DnaA protein are involved in DnaA-DnaA interaction"Biochem.J.. 365. 881-887 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Makise, M: "Molecular mechanism for functional interaction between DnaA protein and acidic phospholipids ; identification of important amino acids"J.Biol.Chem.. 276. 7450-7456 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Makise, M: "Biochemical analysis on DanA protein with mutations in both Arg328 and Lys372"Biochem.J.. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Lee, J.R: "Inhibitory effects, of acidic phospholipids on the binding of Origin Recognition Complex to origin DNA"Biochem.J.. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Makise, M: "Sequence-independent DNA binding activity of DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli"J.Biochem.. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Tsutsumi, S: "Gastric irritant-induced apoptosis in guinea pig gastric mucosal cells in primary culture"Biochim.Biophys.Acta. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Tomisato, W: "NSAIDs induce both necrosis and apoptosis in guinea pig gastric mucosal cells in primary culture"Am.J.Physiol.Gastrointest.Liver Physiol.. 281. G1092-G1100 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Makise,M.: "Identification of amino acids involved in the functional interaction between DnaA protein and acidic phospholipids."J.Biol.Chem.. 275. 4513-4518. (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Mizushima,T: "Site-directed mutational analysis of DnaA protein, the initiator of chromosomal DNA replication in E.coli."J.Biochem.(review). 127. 1-7 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Mizushima,T: "Cdc6p modulates the structure and DNA binding activity of the Origin Recognition Complex in vitro."Genes & Dev.. 14. 1631-1641. (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kondo,T.: "Suppression of temperature-sensitivity of a dnaA46 mutant by higher DNA supercoiling"Biochem.J.. 348. 375-379 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tomisato,W.: "Geranylgeranylacetone protect sultured guinea pig gastric mucosal cells from cytotoxic effect of indomethacin."Dig.Dis.Sci.. 45. 1674-1679 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Makise,M.: "Molecular mechanism for functional interaction between DnaA protein and acidic phospholipids ; identification of important amino acids"J.Biol.Chem.. (In press). (2001)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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