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Molecular Mechanism of Viable but Nonculturable Bacteria

Research Project

Project/Area Number 12490009
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 広領域
Research InstitutionThe University of Tokyo

Principal Investigator

KOGURE Kazuhiro  The University of Tokyo, Ocean Research Institute, Marine Ecosystems Dynamics, Professor, 海洋研究所, 教授 (10161895)

Co-Investigator(Kenkyū-buntansha) YAMAMOTO Hiroyuki  Japan Marine Science and Technology Center, Principal Investigator, 研究主幹 (30182645)
CHIURA Hiroshi  International Christian University, Associate Professor, 教養学部, 準教授 (00103698)
MIZUNOE Yoshimitsu  Kyushu University, Faculty of Medicine, Associate Professor, 大学院・医学系研究科, 助教授 (20157514)
ISHIHAMA Akira  National Institute of Genetics, Professor Emeritus, 名誉教授 (80019869)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥14,300,000 (Direct Cost: ¥14,300,000)
Fiscal Year 2002: ¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 2001: ¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 2000: ¥7,000,000 (Direct Cost: ¥7,000,000)
KeywordsVNC / Bacteria / Physiology / Molecular level / Microbial Ecology / Stationary Phase / Culturability / Sigma Factor / 培養不能状態 / 酸素ストレス / ウイルス様粒子 / 化学合成生態系 / 密度勾配 / シグマファクター / 増殖期 / VNC状態 / 海洋細菌 / Percoll密度勾配 / 酸化的ストレス / 培養不能 / 発現 / 遺伝子 / ストレス
Research Abstract

The establishment of bacteriology is based on the development of pure culture technique by using agar plates. Although individual cells are tiny, the presence of the cell is seen as a colony after incubation under the suitable condition. This technique had made it possible not only to confirm the presence but also to enumerate the cells. Eventually, it started to be regarded that no colony means the absence or death of the cells. This idea has been the standard for virtually all the scientific fields of bacteriology for long time.
Microbial ecologists are the first group that had recognized the presence of non-culturable bacterial cells in nature. They found that only a small portion of bacteria were culturable by the standard method and the lack of culturability did not mean the absence of living cells.
The concept of Viable but Nonculturable (VNC) was proposed in 1985 by Prof. Rita R.Colwell. This idea is that cells may fall in non-culturable state while keeping certain metabolic activities. Under certain condition, those cells may return to the normal condition and start to show the culturability. If this is the case, all the culture-dependent diagnostic tests or detection method may miss the presence of potentially harmful microorganisms. Since the proposal, more than 40 bacteria have been reported to fall into VNC states. However this physiological state has seldom been precisely described at molecular level, which causes controversial discussions on its real state.
The purpose of this research was to clarify its physiological state at molecular level.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (88 results)

All Other

All Publications (88 results)

  • [Publications] Wai SN, Mizunoe Y, Takade A, Yoshida, S: "A comparison of solid and liquid media for resuscitation of starvation- and low-temperature-induced nonculturable cells of Aeromonas hydrophila."Arch Microbiol. 173. 307-310 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Mizunoe Y, Wai SN, Ishikawa T, Takade A, Yoshida S: "Resuscitation of viable but nonculturable cells of Vibrio parahaemolyticus induced at low temperature under starvation."FEMS Microbiol Lett. 186. 115-120 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Lai XE, Arencibia I, Johansson A, Wai SN, Oscarsson J, Kalfas S, Sundqvist KG, Mizunoe Y, Sjostedt A, Uhlin BE: "Cytocidal and apoptotic effects of the ClyA protein from Escherichia coli on primary and cultured monocytes and macrophages."Infect Immun. 68. 4363-4367 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Westermark M, Oscarsson J, Mizunoe Y, Urbonaviciene J, Uhlin BE: "Silencing and activation of the ClyA cytotoxin expression in Escherichia coli."J Bacteriol. 182. 6347-6357 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Iida K, Mizunoe Y, Wai SN, Yoshida S: "Type 1 fimbriation and its phase switching in diarrheagenic Escherichia coli strains."Clin Diagn Lab Immun. 8. 489-495 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saito M, Ohga S, Endoh M, Nakayama H, Mizunoe Y, Hara T, Yoshida S: "H2O2-nonproducing Streptococcus strains : Survival in stationary-phase and virulence in chronic granulomatous disease."Microbiology. 147. 2469-2477 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kawabata S, Beisel HG, Huber R, Bode W, Gokudan S, Muta T, Tsuda R, Koori K, Kawahara T, Seki N, Mizunoe Y, Wai SN, Iwanaga S: "Role of tachylectins in host defense of the Japanese horseshoe crab Tachypleus tridentatus"Adv Exp Med Biol.. 484. 195-202 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Oscarsson J, Westermark M, Lofdahl S, Olsen B, Palmgren H, Mizunoe Y, Wai SN, Uhlin BE: "Characterization of a pore-forming cytotoxin expressed by Salmonella enterica serovars typhi and paratyphi A."Infection and Immunity. 70. 5759-5769 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ishikawa T, Mizunoe Y, Kawabata S, Takade A, Harada M, Wai S N, Yoshida S: "The iron-binding protein Dps confers hydrogen peroxide stress resistance to Campylobacter jejuni"J.Bacteriol.. 185. 1010-1017 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamamoto, Hiroyuki, Katsunori Fujikura, Akira Hiraishi, Kenji Kato, Yonosuke Maki: "Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communites of hydrothermal vent and cold seep fields."Mar.Ecol.Prog.Ser.. 245. 61-67 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi Xavier.: "Broad Host Range Xenotrophic Gene Transfer by Virus-Like Particles from a Hot Spring"Microbes and Environments. 17. 53-58 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi Xavier, Hiroyuki Yamamoto, Daisuke Koketsu, Hiroki Naito, Kenji Kato: "Virus-Like Particle derived from a Bacterium belonging to the Oldest Lineage of the Domain Bacteria."Microbes and Environments. 16. 191-196 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi X., Kumiko Kita-Tsukamoto: "Purification and Characterisation of a Novel Agarase Secreted by a Marine Bacterium, Pseudoalteromonas sp.Strain CKT1."Microbes and Environments. 15. 11-22 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada, M., K.Kogure: "Membrane bioenergetics in reference to marine bacterial culturability"Nonculturable Microorganisms in the Environment. 47-55 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, S., K.Kogure, E.Tanoue: "Bacterial porin in the ocean and its ecological implications."Microbial Biosystems : New Frontiers. 175-178 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, H.X., B.Velimirov, K.Kogure.: "Virus-like particles in microbial population control and horizontal gene transfer in aquatic environment"Microbial Biosystems : New Frontiers. 167-173 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kazuhiro Kogure: "What is marine bacterium?"Kaiyo. 23. 32-37 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nagata, Erina, Kazuhiro Kogure, Kumiko Kita-Tsukamoto, Minoru Wada, Mitsuru Eguchi.: "Na+ dependent respiratory chain in Vibrio anguillarum, a fish pathoge n, isolated from a freshwater area."FEMS Microbial Ecology. 44. 225-230 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nishino, T., B.B.Nayak, K.Kogure: "Density dependent sorting of physiologically different cells of Vibrio parahaemolyticus"Applied and Environmental Microbiology. 69. 3569-3572 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nishino, T., E.Ikemoto, K.Kogure.: "Application of atomic force microscopy to observation of marine bacteria"Journal of Oceanography. 60. 219-225 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Gowrishankar J, Yamamoto K, Subbarayan PR, Akira Ishihama.: "In vitro properties of RpoS (sigma(S)) mutants of Escherichia coli with postulated N-terminal subregion 1.1 or C-terminal region 4 deleted."J Bacteriol. 185. 2673-2679 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Makinoshima H, Aizawa SI, Hayashi H, Takeyoshi M, Nishimura A, Ishihama A.: "Growth phase-coupled alterations in cell structure and function of Escherichia coli"J.Bacteriol.. 185. 1338-1345 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshida M, Kashiwagi K, Kawai G, Ishihama A, Igarashi K.: "Polyamines enhance synthesis of the RNA polymerase sigma(38) subunit by suppression of an amber termination codon in the open reading frame"J Biol.Chem. 277. 37139-37146 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ghosh P, Ishihama A, Chatterji D: "Escherichia coli RNA polymerase subunit omega and its N-terminal domain bind full-length beta ' to facilitate incorporation into the alpha (2)beta subassembly"Eur.J.Biochem. 268. 4621-4627 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Rai, V.Samuel, Hideyuki Tomitori, Madoka Yoshida, Auayporn Apirakaramwong, Keiko Kashiwagi, Koji Takio, Akira Ishihama, Kazuei Igarashi: "Properties of a revertant of Escherichia coli viable in the presence of spermidine accumulation : Increase in L-glycerol 3-phosphate."J.Bacteriol.. 183. 4493-4498 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Culham DE, Lu A, Jishage M, Krogfelt KA, Ishihama A, Wood JM: "The osmotic stress response and virulence in pyelonephritis isolates of Escherichia coli : contributions of RpoS, Prop, ProU and other systems"Microbiology. 147. 1657-1670 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sujatha S, Ishihama A, Chatterji D: "Functional complementation between mutations at two distant positions in Escherichia coli RNA polymerase as revealed by second-site suppression."Mol.Gen.Genet.. 264. 531-538 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujita N, Endo S, Ishihama A: "Structural requirements for the interdomain linker of alpha subunit of Eseherichia coli RNA polymerase."Biochemistry -US. 39. 6243-6249 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kimura M, Ishihama A.: "Involvement of multiple subunit-subunit contacts in the assembly of RNA polymerase II."Nucleic Acid Res.. 28. 952-959 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ozoline ON, Fujita N, Ishihama A.: "Transcription activation mediated by the carboxyl-terminal domain of the RNA polymerase alpha-subunit - Multipoint monitoring using a fluorescent probe."J.Biol.Chem.. 275. 1119-1127 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wai SN, Mizunoe Y, Takade A, Yoshida, S: "A comparison of solid and liquid media for resuscitation of starvation-and low-temperature-induced nonculturable cells of Aeromonas hydrophila."Arch Microbiol. 173. 307-310 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Mizunoe Y, Wai SN, Ishikawa T, Takade A, Yoshida S: "Resuscitation of viable but nonculturable cells of Vibrio parahaemolyticus induced at low temperature under starvation."FEMS Microbiol Lett. 186. 115-120 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Lai XE, Arencibia I, Johansson A, Wai SN, Oscarsson J, Kalfas S, Sundqvist KG, Mizunoe Y, Sjostedt A, Uhlin BE: "Cytocidal and apoptotic effects of the ClyA protein from Escherichia coli on primary and cultured monocytes and macrophages."Infect Immun. 68. 4363-4367 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Westermark M, Oscarsson J, Mizu roe Y, Urbonaviciene J, Uhlin BE: "Silencing and activation of the ClyA cytotoxin expression in Escherichia coli."J Bacteriol. 182. 6347-6357 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Iida K, Mizunoe Y, Wai SN, Yoshida S: "Type 1 fimbriation and its phase switching in diarrheagenic Escherichia coli strains."Clin Diagn Lab Immun. 8. 489-495 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saito M, Ohga S, Endoh M, Nakayama H, Mizunoe Y, Hara T, Yoshida S: "H2O2-nonproducing Streptococcus strains : Survival in stationary-phase an virulence in chronic granulomatous disease."Microbiology. 147. 2469-2477 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kawabata S, Beisel HG, Huber R, Bode W, Gokudan S, Muta T, Tsuda R, Koori K, Kawahara T, Seki N, Mizunoe Y, Wai SN, Iwanaga S: "Role of tachylectins in host defense of the Japanese horseshoe crab Tachypleus tridentatus"Adv Exp Med Biol.. 484. 195-202 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Oscarsson J, Westermark M, Lofdahl S, Olsen B, Palmren H, Mizunoe Y, Wai SN, Uhlin BE: "Characterization of a pore-forming cytotoxin expressed by Salmonella enterica serovars typhi and paratyphi A."Infection and Immunity. 70. 5759-5769 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ishikawa T, Mizunoe Y, Kawabata S, Takade A, Harada M, Wai SN. Yoshida S: "The iron-binding protein Dps confers hydrogen peroxide stress resistance to Campylobacter jejuni"J.Bacteriol.. 185. 1010-1017 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamamoto, Hiroyuki, Katsunori Fujikura, Akira Hiraishi, Kenji Kato, Yonosuke Maki: "Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communites of hydrothermal vent and cold seep fields."Mar.Ecol.Prog.Ser.. 245. 61-67 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi Xavier.: "Broad Host Range Xenotrophic Gene Transfer by Virus-Like Particles from a Hot Spring"Microbes and Environments. 17. 53-58 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi Xavier, Hiroyuki Yamamoto, Daisuke Koketsu, Hiroki Naito, Kenji Kato: "Virus-Like Particle derived from a Bacterium belonging to the Oldest Lineage of the Domain Bacteria."Microbes and Environments. 16. 191-196 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, Hiroshi X., Kumiko Kita-Tsukamoto: "Purification and Characterization of a Novel Agarase Secreted by a Marine Bacterium, Pseiidoalteromonas sp.Strain CKT1."Microbes and Environments. 15. 11-22 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada, M., K.Kogure: "Membrane bioenergetics in reference to marine bacterial culturability"Nonculturable Microorganisms in the Environment. 47-55 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, S., K.Kogure, E.Tanoue: "Bacterial porin in the ocean and its ecological implications."Microbial Biosystems : New Frontiers. 175-178 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Chiura, H.X., B.Velimirov, K.Kogure.: "Virus-like particles in microbial population control and horizontal gene transfer in aquatic environment"Microbial Biosystems : New Frontiers. 167-173 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kazuhiro Kogure: "What is marine bacterium?"Kaiyo. 23. 32-37 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nagata, Erina, Kazuhiro Kogure, Kumiko Kita-Tsukamoto, Minoru Wada, Mitsuru Eguchi.: "Nat dependent respiratory chain in Vibrio anguillarum, a fish pathogen, isolated from a freshwater area."FEMS Microbial Ecology. 44. 225-230 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nishino, T., B.B.Nayak, K.Kogure: "Density dependent sorting of physiologically different cells of Vibrio parahaemolyticus"Applied and Environmental Microbiology. 69. 3569-3572 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nishino, T., E.Ikemoto, K.Kogure.: "Application of atomic force microscopy to observation of marine bacteria"Journal of Oceanography. 60. 219-225 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Gowrishankar J, Yamamoto K, Subbarayan PR., Akira Ishihama.: "In vitro properties of RpoS (sigma(S)) mutants of Escherichia coil with postulated N-terminal subregion 1.1 or C-terminal region 4 deleted."J Bacteriol. 185. 2673-2679 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Makinoshima H, Aizawa SI, Hayashi H, Takeyoshi M, Nishimura A, Ishihama A.: "Growth phase-coupled alterations in cell structure and function of Escherichia coli"J.Bacteriol.. 185. 1338-1345 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshida M, Kashiwagi K, Kawai G, Ishihama A, Igarashi K.: "Polyamines enhance synthesis of the RNA polymerase sigma(38) subunit by suppression of an amber termination colon in the open reading frame"J Biol.Chem. 277. 37139-37146 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ghosh P, Ishihama A, Chatterji D: "Escherichia coil RNA polymerase subunit omega and its N-terminal domain bind full-length beta to facilitate incorporation into the alpha (2)beta subassembly"Eur.J.Biochem. 268. 4621-4627 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Rai, V.Samuel, Hideyuki Tomiiori, Madoka Yoshida, Auayporn Apirakaramwong, Keiko Kashiwagi, Koji Takio, Akira Ishihama, Kazuei Igarashi: "Properties of a revertant of Escherichia coil viable in the presence of spermidine accumulation : Increase in L-glycerol 3-phosphate."J.Bacterial.. 183. 4493-4498 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Culham DE, Lu A, Jishage M, Krogfelt KA, Ishihama A, Wood JM: "The osmotic stress response and virulence in pyelonephritis isolates of Escherichia coil : contributions of RpoS, Prop, ProU and other systems"Microbiology. 147. 1657-1670 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sujatha S, Ishihama A, Chatterji D: "Functional complementation between mutations at two distant positions in Escherichia coil RNA polymerase as revealed by second-site suppression."Mol.Gen.Genet.. 264. 1657-1670 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Fujita N, Endo S, Ishihama A: "Structural requirements for the interdomain linker of alpha subunit of Escherichia coil RNA polymerase."Biochemistry -US. 39. 6243-6249 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kimura M, Ishihama A.: "Involvement of multiple subunit-subunit contacts in the assembly of RNA polymerase II."Nucleic Acid Res.. 28. 952-959 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ozoline ON, Fujita N, Ishihama A.: "Transcription activation mediated by the carboxyl-terminal domain of the RNA polymerase alpha-subunit -Multipoint monitoring using a fluorescent probe."J.Biol.Chem.. 275. 1119-1127 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Makinoshima H, Aizawa SI, Hayashi H, Miki T, Nishimura A, Ishihama A: "Growth phase-coupled alterations in cell structure and function of Escherichia coli"Journal of Bacteriology. 185:(4). 1338-1345 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yamamoto K, Yata K, Fujita N, Ishihama A: "Novel mode of transcription regulation by SdiA, an Escherichia coli homologue of the quorum-sensing regulator"Molecular Microbiology. 41:(5). 1187-1198 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ghosh P, Ishihama A, Chatterji D: "Escherichia coli RNA polymerase subunit omega and its N-terminal domain bind full-length beta ' to facilitate incorporation into the alpha(2)beta subassembly"European Journal of Biochemistry. 268:(17). 4621-4627 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Raj VS, Tomitori H, Yoshida M, Apirakaramwong A, Kashiwagi K, Takio K, Ishihama A, Igarashi K: "Properties of a revertant of Escherichia coli viable in the presence of spermidine accumulation : Increase in L-glycerol 3-phosphate"Journal of Bacteriology. 183:(15). 4493-4498 (2001)

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  • [Publications] Makinoshima H, Nishimura A, Ishihama A: "Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase"Molecular Microbiology. 43:(2). 269-279 (2002)

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  • [Publications] Ishihama A: "Functional modulation of Escherichia coli RNA polymerase"Annual Revioew of Microbiology. 54. 499-518 (2000)

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  • [Publications] Yoshida M, Kashiwagi K, Kawai G, Ishihama A, Igarashi K: "Polyamines enhance synthesis of the RNA polymerase sigma(38) subunit by suppression of an amber termination codon in the open reading frame"Journal of Biological Chemistry 277 : (40) 37139-37146 2002. 277:(40). 37139-37146 (2002)

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  • [Publications] Culham DE, Lu A, Jishage M, Krogfelt KA, Ishihama A, Wood JM: "The osmotic stress response and virulence in pyelonephritis isolates of Escherichia coil : contributions of RpoS, Prop, ProU and other systems"Microbiology. 147. 1657-1670 (2001)

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  • [Publications] Sujatha S, Ishihama A, Chatterji D: "Functional complementation between mutations at two distant positions in Escherichia coli RNA polymerase as revealed by second-site suppression"Sujatha S, Ishihama A, Chatterji D Molecular and General Genetics. 264:(5). 531-538 (2001)

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  • [Publications] Azam TA, Hiraga S, Ishihama A: "Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid"Genes to Cells. 5:(8). 613-626 (2002)

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  • [Publications] Fujita N, Endo S, Ishihama A: "Structural requirements for the interdomain linker of alpha subunit of Escherichia coli RNA polymerase"Biochemistry. 39:(20). 6243-6249 (2002)

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  • [Publications] Kimura M, Ishihama A: "Involvement of multiple subunit-subunit contacts in the assembly of RNA polymerase II"Nucleic Acid Research 28. 28:(4). 952-959 (2000)

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  • [Publications] Ozoline ON, Fujita N, Ishihama A: "Transcription activation mediated by the carboxyl-terminal domain of the RNA polymerase alpha-subunit -Multipoint monitoring using a fluorescent probe"Journal of Biological Chemistry. 245:61-67 2002. 61-67 (2002)

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  • [Publications] Hiroyuki Yamamoto, Katsunori Fujikura, Akira Hiraishi, Kenji Kato, Yonosuke Maki: "Phylogenetic characterization and biomass estimation of bacterial endosymbionts associated with invertebrates dwelling in chemosynthetic communites of hydrothermal vent and cold seep fields"Marine Ecology Progress Series. 245. 61-67 (2002)

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  • [Publications] Nishino, T., B.B.Nayak, K.Kogure: "Density dependent sorting of physiologically different cells of Vibrio parahaemolyticus"Applied and Environmental Microbiology. (in press).

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  • [Publications] Nagata, Erina, Kazuhiro Kogure, Kumiko Kita-Tsukamoto, Minoru Wada, Mitsuru Eguchi: "Na+ dependent respiratory chain in Vibrio anguillarum, a fish pathogen, isolated from a freshwater area"FEMS Microbial Ecology. (in press).

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  • [Publications] Ishikawa T, Mizunoe Y, Kawabata S, Takade A, Harada M, Wai SN, Yoshida S: "The iron-binding protein Dps confers hydrogen peroxide stress resistance to Campylobacter jejuni"JOURNAL OF BACTERIOLOGY. 185:(3). 1010-1017 (2003)

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  • [Publications] Saito M, Ohga S, Endoh M, Nakayama H, Mizunoe Y, Hara T, Yoshida S: "H2O2-nonproducing Streptococcus pyogenes strains : survival in stationary phase and virulence in chronic granulomatous disease"MICROBIOLOGY-SGM. 147. 2469-2477 (2001)

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  • [Publications] Wai SN, Mizunoe Y, Takade A, Yoshida S: "A comparison of solid and liquid media for resuscitation of starvation-and low-temperature-induced nonculturable cells of Aeromonas hydrophila"ARCHIVES OF MICROBIOLOGY. 173:(4). 307-310 (2000)

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  • [Publications] Mizunoe Y, Wai SN, Ishikawa T, Takade A, Yoshida S: "Resuscitation of viable but nonculturable cells of Vibrio parahaemolyticus induced at low temperature under starvation"FEMS MICROBIOLOGY LETTERS. 186:(1). 115-120 (2000)

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  • [Publications] Hiroshi Xavier Chiura: "Broad Host Range Xenotrophic Gene Transfer by Virus-Like Particles from a Hot Spring"Microbes and Environments. 17(2002). 53-58 (2002)

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  • [Publications] Hiroshi Xavier Chiura, Hiroyuki Yamamoto, Daisuke Koketsu, Hiroki Naito, Kenji Kato: "Virus-Like Particle derived from a Bacterium belonging to the Oldest Lineage of the Domain Bacteria"Microbes and Environments. 17. 48-52 (2002)

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  • [Publications] Satoru Suzuki, Shin-ichi Kitamura, Hiroshi X.Chiura: "Aquabirnavirus Widely Distributes in the Ocean, Providing a Dissolved RNA Pool"Microbes and Environments. 16. 191-196 (2001)

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  • [Publications] Saito, M. et al.: "H_2O_2-nonproducing Streptococcus pyogenes strains : survival in stationary phase and virulence in chronic granulomatous disease"Microbiology. 147. 2469-2477 (2001)

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  • [Publications] Eguchi, et al.: "Sphingomonas alaskensis Strain AFO1, an Abundant Oigotrophic Ultramicrobactcrium from the North pacific"Applied and Environmental Microbiology. 67. 4945-4954 (2001)

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  • [Publications] Kanemitsu, et al.: "Quantitative determination of gelatinase activity among enterococci"Journal of Microbiol Method. 47. 11-16 (2001)

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  • [Publications] Makinoshima, et al.: "Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase"Moleculan Microbiology. 43. 269-279 (2002)

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  • [Publications] Chiura, et al.: "Virus-like particle derived from a bactium belonging to the oldest lineage of the domain Bacteria"Microbes and Environments. (印刷中). (2002)

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Published: 2000-04-01   Modified: 2016-04-21  

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