• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Elucidation of prevalence of group B human rotavirus in Asia

Research Project

Project/Area Number 12576011
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Virology
Research InstitutionSapporo Medical University

Principal Investigator

KOBAYASHI Nobumichi  Sapporo Medical University Faculty of Medicine professor, 医学部, 教授 (80186759)

Co-Investigator(Kenkyū-buntansha) TANIGUCHI Koki  Fujita Health University Faculty of Medicine professor, 医学部, 教授 (40094213)
ISHINO Masaho  Sapporo Medical University Faculty of Medicine assistant professor, 医学部, 講師 (30232325)
KOJIMA Kazunobu  Sapporo Medical University Faculty of Medicine assistant professor, 医学部, 講師 (20264517)
SANEKATA Takeshi  Tottori University Faculty of Veterinary Science, associate professor, 農学部, 助教授 (20205991)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥15,300,000 (Direct Cost: ¥15,300,000)
Fiscal Year 2002: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2001: ¥4,800,000 (Direct Cost: ¥4,800,000)
Fiscal Year 2000: ¥6,700,000 (Direct Cost: ¥6,700,000)
Keywordsrotavirus / group B / adult / diarrhea / India / Bangladesh / China / CAL-1 / バングラディシュ
Research Abstract

In the present study, group B rotaviruses were detected in India (9 strains in 4086 specimens), Bangladesh (14 strains in 1151 specimens), and China (2 strains in 769 specimens), mostly in specimens from sporadic diarrheal cases of adult patients. Genetic analysis was done for CAL-1 strin in India, Wh683 strain in China, and four strains (Bang373, Bang544, Bang334, and Bang402) in Bangladesh. The Chinese strain Wh683 which was obtained in Wuhan city in 2000 was genetically extremely closeer (sequence identity was 98-99%) to the ADRV strain (a prototype of human group B rotacirus detected in 1982) than to CAL-1 or Bang373 (identities of 90-95%), indicating that group B rotaviruses in China are highly conserved. In contrast, VP7 gene sequences of the Bangladeshi group B rotaviruses were almost identical each other and showed also high sequence identity to Indian strain CAL-1 (98%) and also to Chinese strain ADRV (92%), while identities to bovine and murine viruses were considerably low (60-63%). Other genes of Bang373 and Bang544 encoding VP2, VP4, VP6, and NSP1〜NSP5 showed also extremely high sequence identities to those of CAL-l (97.7-99.4%) than those of ADRV (89.9-93.9%). Characterization of nucleotide substitutions among Bang373, CAL-1, and ADRV suggested that all the gene segments might have evolved neutrally at similar mutaton rates. In conclusion, group B rotaviruses detected in Bangladesh represented by Bang373 and the Indian virus CAL-1 were considered as virtually identical viruses which are genetically distinct from ADRV, and it was suggested that Bang373 (CAL-l)-like group B rotavirus (Bengali strains) might have been primarily distributed to an are around the Bay of Bengal.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] Sanekata T et al.: "Human group B rotavirus infection in adults and infants with severe diarrhea in Bangladesh"Journal of Clinical Microbiology. (in press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Pongsuwanna Y et al.: "Detection of a human rotavirus with G12 and P[9] specificity in Thailand"Journal of Clinical Microbiology. 40. 1390-1394 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Das S et al.: "Genomic diversity of group A rotavirus strains infecting humans in eastern India"Journal of Clinical Microbiology. 40. 146-149 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N et al.: "Sequence analysis of genes encoding structural and nonstructural proteins of a human group B rotavirus detected in Calcutta, India"Journal of Medical Virology. 64. 583-589 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sen A et al.: "The evolution of human group B rotaviruses"Lancet. 357. 198-199 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sen A et al.: "Amplification of various genes of human group B rotaviruses from stool specimens by RT-PCR"Journal of Clinical Virology. 17. 177-181 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N: "Recent Developments in Antiviral Research(Vol.1) (Recent progress in research and development of rotavirus vaccines.)"Transworld Research Network, Trivandrum, India. 14 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sen A, Kobayashi N, Das S, Krishnan T, Bhattacharya SK, Urasawa S, Naik TN: "Amplification of various genes of human group B rotaviruses from stool specimens by RT-PCR"J Clin Virol. 17. 177-181 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sen A, Kobayashi N, Das S, Krishnan T, Bhattacharya SK, Naik TN: "The evolution of human group B rotaviruses"Lancet. 357. 198-199 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N, Naik TN, Kusuhara Y, Krishnan T, Sen A, Bhattacharya SK, Taniguchi K, Alam MM, Urasawa T, Urasawa S: "Sequence analysis of genes encoding structural and nonstructural proteins of a human group B rotavirus detected in Calcutta, India"J Med Virol. 64. 583-589 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sanekata T, Ahmed MU, Kader A, Taniguchi K, Kobayashi N: "Human group B rotavirus infection in adults and infants with severe diarrhea in Bangladesh"J Clin Microbiol. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Okada J, Urasawa T, Kobayashi N, Taniguchi K, Hasegawa A, Mise K, Urasawa S: "A new P serotype of group A human rotavirus closely related to that of a porcine rotavirus"J Med Virol. 60. 63-69 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Das S, Sen A, Uma G, Varghese V, Chaudhuri S, Bhattacharia SK, Krishnan T, Dutta P, Dutta D, Bhattacharia MK, Mitra U, Kobayashi N, Naik TN: "Genomic diversity of group A rotavirus strains infecting humans in eastern India"J Clin Microbiol. 40. 146-149 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Pongsuwanna Y, Guntapong R, Chiwakul M, Tacharoenmuang R, Onvimala N, Wakuda M, Kobayashi N, Taniguchi K: "Detection of a human rotavirus with G12 and P[9] pecificity in Thailand"J Clin Microbiol. 40. 1390-1394 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Das S, Varghese V, Choudhury S, Barman P, Mahapatra S, Kojima K, Bhattacharya SK, Krishnan T, Ratho RK, Chhotray GP, Phukan AC, Kobayashi N, Naik TN: "Emergence of novel group A rotavirus G12 strains in India"J Clin Microbiol. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N, Naik TN, Ahmed MU: "Genetic diversity and mode of molecular evolution among human group B rotaviruses, Genomic diversity and molecular epidemiology of rotaviruses. Transworld Research Network"Trivandrum (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N: "Recent progress in research and development of rotavirus vaccines, Recent Developments in Antiviral Research (Vol.1). Transworld Research Network"Trivandrum. 143-156 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sanekata T et al.: "Human group B rotavirus infection in adults and infants with severe diarrhea in Bangladesh"Journal of Clinical Microbiology. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Pongsuwanna Y et al.: "Detection of a human rotavirus with G12 and P[91] specificity in Thailand"Journal of Clinical Microbiology. 40. 1390-1394 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Das S et al.: "Genomic diversity of group A rotavirus strains infecting humans in eastern India"Journal of Clinical Microbiology. 40. 146-149 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kobayashi N et al.: "Sequence analysis of genes encoding structural and nonstructural proteins of a human group B rotavirus detected in Calcutta, India"Journal of Medical Virology. 64. 583-589 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sen A et al.: "The evolution of human group B rotaviruses"Lancet. 357. 198-199 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sen A et al.: "Amplification of various genes of human group B rotaviruses from stool specimens by RT-PCR"Journal of Clinical Virology. 17. 177-181 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kobayashi N: "Recent Developments in Antiviral Research(Vol.1)(Recent progress in research and development of rotavirus vaccines.)"Transworld Research Network, Trivandrum, India. 14 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Das S et al.: "Genomic diversity ofgroup A rotavirus strains infecting hunmans in eastern India"Journal of Clinical Microbiology. 40. 146-149 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sen A et al.: "The evolution of group B rotaviruses"Lancet. 357. 198-199 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kobayashi N et al.: "Sequence analysis of genes encoding structural and nonstructural proteins of a human group B rotavirus detected in Calcutta, India"Journal of Medical Virology. 64. 583-589 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sen A et al.: "Amplification of various genes of human group B rotaviruses from stoo specimens by RT-PCR"Journal of Clinical Virology. 17. 177-181 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] 小林宣道, 浦沢正三: "特集1:胃腸炎ウイルス1.ロタウイルス"ウイルス. 50. 157-172 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sen A,Kobayashi N,Das S,Krishnan T,Bhattacharya SK,Urasawa S,Naik TN.: "Amplification of various genes of human group B rotaviruses from stoo specimens by RT-PCR."Journal of Clinical Virology. 17. 177-181 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Sen A,Kobayashi N,Das S,Krishnan T,Bhattacharya SK,Naik TN.: "The evolution of group B rotaviruses."Lancet. 357. 198-199 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kobayashi N,Naik TN,Kusuhara Y,Krishnan T,Sen A,Bhattacharya SK,Taniguchi K,Alam MM,Urasawa T,Urasawa S.: "Sequence analysis of genes encoding structural and nonstructural proteins of a human group B rotavirus detected in Calcutta, India."Journal of Medical Virology. (印刷中). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小林宣道: "ロタウイルスワクチン開発の現状と問題点."ウイルス感染症セミナー. 2. 33-41 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 小林宣道,浦沢正三: "特集1:胃腸炎ウイルス 1.ロタウイルス."ウイルス. 50. 157-172 (2000)

    • Related Report
      2000 Annual Research Report

URL: 

Published: 2000-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi