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Phase transitions of organic crystals caused by conformational changes of alkyl chains : observation of intermediate stages with a temperature-resolved single crystal diffraction method

Research Project

Project/Area Number 12640490
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research InstitutionThe University of Electro-Communications

Principal Investigator

IWASAKI Fujiko  The University of Electro-Communications, faculty of Electro-communications Dept.of Applied Physics and Chemistry, Professor, 電気通信学部, 教授 (10017329)

Co-Investigator(Kenkyū-buntansha) HASHIZUME Daisuke  RIKEN, Institute of Physical and Chemical research, Molecular Characterization Division, Researcher, 物質基盤研究部, 研究員 (00293126)
YASUI Masanori  The University of Electro-Communications, Faculty of Electro-Communications, Dept.of Applied Physics and Chemistry, Associate professor, 電気通信学部, 助教授 (00201822)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 2002: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2001: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2000: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsX-ray crystal structure analysis / temperature-resolved X-ray structure analysis / phase transition / organic crystals / powder diffraction method / acylurea / acridin-N-oxyl derivatives / pentacoordinated boron compound / 銅錯体 / 超原子価B化合物 / フェナントリジンニトロキシド / アルキル鎖のコンホメーション
Research Abstract

Very few studies have been done on the detailed structural changes during transitions, because of the crystal damage and difficulties of intensity measurements for single crystal structure analyses at various temperatures. Recently, temperature-resolved structure analyses became possible through the development of diffractometers with two-dimensional detectors. Crystals of acridin-N-oxyl derivatives with a long alkyl chain (CnH2n+1, n=12, 13) showed that the first order. In the case of the n=13, the single crystalline states were kept during the transition. Structure analyses were carried out every 2 K during the transition from 264 to 252 K and at 295, 280, 273, 244 and 100 K. Crystals of a acylurea derivative, iso-C_5H_<11>-CO-NH-CO-NH-C_2H_5 showed a phase transition at 367K (mp=378 K) and also kept single-crystalline-state during the transition. Structure analyses were performed at 98, 298, 328 K and in the range of 348 ~ 374 K every 2 K. For Crystals ClCH_2-CO-NH-CO-NH-C_5H_<11>, … More powder diffraction method was performed because of crystalline damage. In these crystals, intermediate stages and mechanism of phase transitions caused by the conformational changes of alkyl groups induced by the thermal expansion was revealed. A pentacoordinated boron compound bearing 1, 8-dimethoxyanthracene and dithiocatecholato ligands showed the second-order phase transition, Pnma at high temperature phase and P2_12_12_1 at low temperature phase. Temperature-dependent structure analyses were performed every 2 K during phase transition. Following the thermal expansion, the catecholate moieties begin to librate even from 120 K and become disordered at 203 K. Intermolecular energies were calculated using simple force field potentials for the neighboring molecular pairs at each temperature. The energy barrier between ordered and disordered structures at the transition point was estimated about 1 kJ/mol
X-ray crystal structure analysis 2 temperature-resolved X-ray structure analysis (3) phase transition 4) organic crystals (5) powder diffraction method (6 acylurea 7 acridin-N-oxyl derivatives (8) pentacoordinated boron compound Less

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] D.Hashidume, et al.: "Mechanism of the first-order phase transition of an acylurea derivative : observation of intermediate stages of transformation with a detailed temperature-resolved single-crystal diffraction method."Acta Crysttalogr.. B59. 401-415 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui et al.: "Electron Density Distributions of Pyrimidine-Bridged Cu, Fe, and Co Complexes Showing Magnetic Properties."Mat.Cryst.Liq.Cryst.. 376. 519-524 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, et al.: "Dipyrimidine-Cu(II) dinitrate complexes showing magnetic interactions"Acta Crysttalogr.. B57. 288-295 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, et al.: "Bis(hfac)-Cu(II) complexes bridged by pyrimidines showing magnetic interactions"Acta Crystallogr.. B57. 772-779 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] D.Hashizume, et al.: "Two-component molecular crystals from N-heteroaromatics and nitrobenzoic acids"Acta Crystallogr.. C57. 1067-1072 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, et al.: "The Experimental Deformation Electron-Density Distributions of 4-Arylmethyleneamino-2,2,6,6-tetramethyl-1-piperidyloxyl (TEMPO) Radicals : Relations between Electron Densities and Intermolecular Interactions"Bull.Chem.Soc.Jp.. 73. 1333-1340 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] D.Hashizume, N.Miki, T.Yamazaki, Y.Aoyagi, T.Arisato, H.Uchiyama, T.Endo, M.Yasui, F.Iwasaki: "Mechanism of the first-order phase transition of an acylurea derivative : observation of intermediate stages of transformation with a detailed temperature-resolved single-crystal diffraction method"Acta Crysttalogr. B59. 404-415 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, R.Takayama, N.Akiyama, D.Hashizume, F.Iwasaki: "Electron Density Distributions of Pyrimidine-Bridged Cu, Fe, And Co Complexes Showing Magnetic Properties"Mol.Cryst.Liq.Cryst.. 376. 519-524 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, Y.Ishikawa, N.Akiyama, T.Ishida, T.Nogami, F.Iwasaki: "Dipyrimidine-Cu(II) dinitrate complexes showing magnetic interactions"Acta Crystallogr.. B57. 288-295 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, Y.Ishikawa, N.Akiyama, T.Ishida, T.Nogami, F.Iwasaki: "Bis(hfac)-Cu(II) complexes bridged by pyrimidines showing magnetic interactions"Acta Crystallogr.. B57. 772-779 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] D.Hashizume, M.Iegaki, M.Yasui, F.Iwasaki, J.Meng, Z.Wen, T.Matsuura: "Two-component molecular crystals from N-heteroaromatics and nitrobenzoic acids"Acta Crystallogr.Sect.C. C57. 1067-1072 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, F.Iwasaki, E.Kan-nari, T.Ishida, T.Nogami, F.Iwasaki: "The Experimental Deformation Electron-Density Distributions of 4-Arylmethyleneamino-2,2,6,6-tetramethyl-1-piperidyloxyl (TEMPO) Radicals : Relations between Electron Densities and Intermolecular Interactions"Bull.Chem.Soc.Jpn.. 73. 1333-1340 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yasui, Y.Ishikawa, N.Akiyama, T.Ishida, T.Nogami, F.Iwasaki: "Synthesis And Properties of Novel Macrocyclic Compounds Bearing Thiourea Moities By Use of Chehmical Feature of Hypervalent Sulfur"J. Heterocyclic Chem.. 39. 189-202 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Yasui, Y.Ishikawa, N.Akiyama, T.Ishida, T.Nogami, F.Iwasaki: "Dipyrimidine-Cu(II) dinitrate complexes showing magnetic interactions"Acta Crystallogr.Sect.B. B57. 288-295 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Yasui, Y.Ishikawa, N.Akiyama, T.Ishida, T.Nogami, F.Iwasaki: "Bis(hfac)-Cu(II) complexes bridged by pyrimidines showing magnetic interactions"Crystallogr.Sect.B. B57. 772-779 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] D.Hashizzume, M.Iegaki, M.Yasui, F.Iwasaki, J.Wen, T.Matsuura: "Two-component molecular crystals from N-heteroaromatics and nitrobenzoic acids"Acta Crystallogr.Sect.C. C57. 1067-1072 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Shimizu, H.Isono, M.Yasui, F.Iwasaki, N.Kamigata: "Solid State Optical Activity of Dichalcogenides : Isolation by Chiral Crystallization and Determination of Absolute Configuration"Organic Left. 3. 3639-3641 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] J.Omata, T.Ishida, D.Hashizume, F.Iwasaki, T.Nogami: "Radical-Copper Wheels : Structure and Magnetism of Hexanuclear Hybrid Arrays"Inorg.Chem.. 40. 3954-3958 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Miyake, T.Ishida, D.Hashizume, F.Iwasaki, T, Nogami: "Ferromagnetic S=1 chain formed by a square N_<i2>S_2 motif in N_i(qt)_2 (qt=quinolin-8-thiolate). Magnetic properties of related compounds"Polyhedron. 20. 1551-1555 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Yasui,E.Kan-nari,T.Ishida,T.Nogami,F.Iwasaki: "The Experimental Deformation Electron-Density Distributions of 4-Aryl methylene amino-2,2,6,6-tetramethyl-1-piperidyloxyl (TEMPO) Radicals : Relations between Electron Densities and Intermolecular Interactions"Bull.Chem.Soc.Jpn.. 73. 1333-1340 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Miyake,T.Ishida,D.Hashizume,F.Iwasaki, and T.Nogami: "One-Dimensional S=1 Ferromagnetic Chain Formed by a Square Ni 2 S 2 Motif in Ni (qt)2 (qt=Quinoline-8-thiolate)"Chem.Lett.. 952-953 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Kusaka,T.Ishida,D.Hashizume,F.Iwasaki,and T.Nogami: "Low-Temperature Magnets M[N(CN) _2]_2 (pyrimidine) (M=Fe and Co) with a 3-D Network"Chem.Lett.. 1146-1147 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] M.Yasui,Y.Ishikawa,N.Akiyama,T.Ishida,T.Nogami and F.Iwasaki: "Dipyrimidine-Cu(II) dinitrate complexes showing magnetic interactions "Acta Crystallogr.Sec.B. 57(in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] M.Yasui,R.Takayama,N.Akiyama,D.Hashidume and F.Iwasaki: "Electron density distributions of pyrimidine-bridged Cu,Fe and Co complexes showing magnetic properties."Mol.Cryst.Liq.Cryst.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 岩崎不二子: "これからの有機結晶化学"日本結晶学会誌. 43. 304-309 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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