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Regulation of orientation and the dynamic behavior of metal complexes bound to DNA

Research Project

Project/Area Number 12640564
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 機能・物性・材料
Research InstitutionChuo University

Principal Investigator

CHIKIRA Makoto  Chuo University,Faculty of Science and Engineering, Professor, 理工学部, 教授 (70006328)

Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 2001: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2000: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsDNA fiber ESR / DNA cleaving reaction / phenathroline copper(II) complex / phenathroline Pt(II) complex / NMR / oligonucleotide / Ni(III) complex / tripeptide / DNA / フェナントロリン白金(II)錯体 / ペプチドNi(III)錯体 / 金属錯体 / ペプチド銅(II)錯体 / ポリアミン銅(II)錯体 / デグリコペプロマイシン / Ni(III)錯体
Research Abstract

In order to develop effective reagents that cleave DNA oxidatively or hydrolytically, various metal complexes have been synthesized and the reactivity and the DNA binding structures have been investigated.
1. Several copper(II) complexes with 4-dentate phenanthroline derivatives with substituents at 2- and 9-postions were synthesized. Bulky substituents that deformed the planarity of the complex enhanced the oxidative cleavage of DNA and the correlation between the reactivity and the binding structure was discussed.
2. In the cleaving reaction with ternary copper(II) complexes with phenanthroline and amino acid, the amino acid depresses the reaction. Further lowering of the reactivity was induced by 2,9-dimethyl substituted phenanthroline. These results suggested that cleaving reaction proceeds with the mono-phenanthroline copper(II) complex.
3. Binding structures of the ternary platinum(II) complexes of phenanthroline or dipyridine with lysine bound to oligonucleotide DO1 and DO2 were analyzed by NMR. The phenanthroline derivative intercalates between G2 and C3 of DO1 and G4 and A5 of DO2 from the minor groove while the bipyridine derivative binds to the AT site of DO1 in the minor groove. The binding structures were refined by molecular dynamic calculation.
4. ESR signals from unstable Ni(III) complexes of histidine-containing tripeptides could be detected by in-situ oxidation of the Ni(II) complex incorporated in DNA. The super-hyperfine splitting from nitrogenous base suggested a presence of the species coordinated to a guanine N7.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (13 results)

All Other

All Publications (13 results)

  • [Publications] M.Chikira: "Deglycopeplomycin metal complexes on DNA-fibers : a role of sugar moiety for the stability and the orientation of the complexes"J. Inorg. Biochem.. 86・1. 180-180 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] R.Nagane: "Interaction of Cu(II) complexes of tetrapeptides, Arg-Gly-His-Xaa, with DNA"J. Inorg. Biochem.. 86・1. 352-352 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Chikira: "DNA-Fiber EPR study of the orientation of Cu(II) complexes of 1,10-phenanthroline and its derivatives bound to DNA : mono(phenanthroline)-copper(II) and its ternary complexes with amino acids"J. Inorg. Biochem.. 89・3-4. 163-173 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Chikira: "Deglycopeplomycin metal complexes on DNA-fibers : a role of sugar moiety for the stability and the orientation of the complexes"J, Inorg. Biochem.. 86-1. 180-180 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] R. Nagane: "Interaction of Cu(II) complexes of tetrapeptides, Arg-Gly-His-Xaa, with DNA"J. Inorg. Biochem. 86-1. 352-352 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Chikira: "DNA-Fiber EPR study of the orientation of Cu(II) complexes of 1, 10-phenanthroline and its derivatives bound to DNA: mono(phenanthroline)copper(II) and its ternary complexes with amino"J. Inorg. Biochem.. 89 3-4. 163-173 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Chikira: "Deglycopeplomycin metal complexes on DNA-fibers : a role of sugar moiety for the stability and the orientation of the complexes"J. Inorg. Biochem.. 86・1. 180-180 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] R. Nagane: "Interaction of Cu(II) complexes of tetrapeptides,Arg-Gly-His-Xaa, with DNA"J. lnorg. Biochem.. 86・1. 352-352 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] M. Chikira: "DNA-Fiber EPR study of the orientation of Cu(II) complexes of 1, 10-phenanthroline and its derivatives bound to DNA ; ……"J. Inorg. Biochem.. (In press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] R.Nagane: "How Amino Acids Control the Binding of Cu (II) Ions to DNA (III) ; A Novel Interaction of Histidine Complex with DNA"J.Inorg.Biochem.. 78・3. 243-249 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] M.Chikira: "Orientation of Iron bleomycin and Porphyrin Complexes on DNA Fibers"Inorg.Chem.. 39・8. 1779-1786 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] R.Nagane: "The DNA-Bound Orientation of Cu (II) Xaa-Gly-His Metallopeptides"J.Inorg.Biochem.. 83・1. 7-23 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 千喜良誠: "自己制御機能を指向した知的分子材料の創製と集積化"中央大学理工学研究所年報. 7. 48-53 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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