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Isolation of indoleamine oxygenase gene from the mollusc Turbo carnutus and functional convergence

Research Project

Project/Area Number 12640664
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 動物生理・代謝
Research InstitutionKochi University

Principal Investigator

SUZUKI Tomohiko  Kochi Univ., Fac, Sci., Prof., 理学部, 教授 (60145109)

Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2002: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2001: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2000: ¥2,100,000 (Direct Cost: ¥2,100,000)
Keywordsmyoglobin / hemoglobin / IDO / Turbo / Sulculus / convergent evolution / アルギニンキナーゼ
Research Abstract

Some members of archaeogastropodic molluscs such as Sulculus and Turbo contain unusual 〜40 kDa myoglobin in their buccal masses. The myoglobin can bind oxygen reversibly, although the oxygen affinity is lower than those of vertebrate and invertebrate myoglobins. The amino acid sequencing clearly showed that Sulculus and Turbo myoglobins evolved not from globin gene but from gene for indoleamine dioxygenase (IDO), a tryptophan-degrading enzyme. The structure of Turbo myoglobin gene has been determined to consist of 14 exons and 13 introns. Compared with the known gene for Sulculus IDO-like myoglobin, all splice junctions but one are conserved exactly between two genes. The exon/intron organization of these myoglobin genes is also highly homologous with that (10 exon-9 intron structure) of human IDO : splice junctions of 6 introns were exactly conserved between three genes, suggesting that these introns have been conserved for at least 600 million years. The open reading frame of Turbo myoglobin cDNA was cloned into the plasmids pQE, pGEX and pET-44, and expressed in E. coli. No myoglobin was expressed in use of pQE vector, while a large amount of fusion protein was expressed as insoluble (pGEX) or soluble (pET-44) forms. To look for putative IDO gene in Turbo or Sulculus, we reexamined the genomic DNA fragments amplified by PCR in full detail, and found two distinct Sulculus fragments A and B containing intron 2. The fragment A corresponded exactly to the myoglobin gene of Sulculus, containing 576 bp intron. On the other hand, fragment B, containing 239 bp intron, differed significantly from fragment A in nucleotide and translated amino acid sequences. Detailed sequence comparison suggests that fragment B may be derived from putative IDO gene of Sulculus.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (12 results)

All Other

All Publications (12 results)

  • [Publications] Suzuki, T., Yokouchi, K., Kawamichi, H., Yamamoto, Y., Uda, K., Yuasa, H.J.: "Comparison of the sequences of Turbo and Sulculus inodeamine dioxygenase-like myoglobin genes"Gene. 308. 89-94 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Takao, R.Yamanaka, K., Gotoh, H., Furukohri, T., Takagi, T.: "Evidence of met-form myoglobin from Theliostyla albicilla radular muscle"Int. J. Biochem. Cell Biol.. 35. 1119-1126 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Sugimura, N., et al.: "Two-domain arginine kinases from the clams Solen strictus and Corbicula japonica. Exceptional amino acid replacement of the functionally important D^<62> by G"Int. J. Biochem. Cell Biol.. 34. 1221-1229 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Yokouchi, K., Kawamichi, H., Yamamoto, Y., Uda, K. and Yuasa, H. J.: "Comparison of the sequences of Turbo and Sulculus inodeamine dioxygenase-like myoglobin genes"Gene. 308. 89-94 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Takao, H., Yamanaka, K., Gotoh, H., Furukohri, T. and Takagi, T.: "Evidence of metform myoglobin from Theliostyla albicilla radular muscle"Int. J. Biochem. Cell Biol.. 35. 1119-1126 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Sugimura, N., Taniguchi, T., Unemi, Y., Murata, T., Hayashida, M., Yokouchi, K., Uda, K. and Furukohri, T.: "Two-domain arginine kinases from the clams Solen strictus and Corbicula japonica. Exceptional amino acid replacement of the functionally important D^<62> by G"Int. J. Biochem. Cell Biol.. 34. 1221-1229 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suzuki, T., Yokouchi, K., Kawamichi, H., Yamamoto, Y., Uda, K., Yuasa, H.J.: "Comparison of the sequences of Turbo and Sulculus inodeamine dioxygenase-Like myoglobin genes"Gene. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Suzuki, T., Takao, H., Yamanaka, K., Gotoh, H., Furukohri, T., Takagi, T.: "Evidence of met-form myoglobin from Theliostyla albicilla radular muscle"Int. J. Biochem. Cell Biol.. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kitazoe, Kurihara, Narita, Okuhara, tominaga, Suzuki: "A New Theory of Phylogeny Inference Through Constraction of Multidimensional vector Space"Mol. Biol. Evol.. 18. 812-828 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Green, Gotoh, Suzuki, Zal, Lallier, Toulmond, Vinagradov: "Electrospray Ionization Mass Spectrometric Observation of Large, Noncornlent Globin Subassemblies in the -3600 kDa Hexagonal Bilayer Hemoglobins"J. Mol. Biol.. 309. 563-570 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Suzuki T. et al.: "Arginine kinase from Nautilus pompilius, a living fossil"J.Biol.Chem.. 275. 23884-23890 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Suzuki T. et al.: "Gastropod arginine kinases from Cellana grata and Aplysia kurodai."Com.Biochem.Physiol. (Biochem.& Mol.Biol.). 127. 505-512 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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