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Elucidation and Application of Enzyme System and Genes Involved in Microbial Desulfurization

Research Project

Project/Area Number 12660078
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionTottori University

Principal Investigator

OHSHITO Takashi  Tottori University, Faculty of Engineering, Lecturer, 工学部, 講師 (00233106)

Co-Investigator(Kenkyū-buntansha) IZUMI Yoshikazu  Tottori University, Faculty of Engineering, Professor, 工学部, 教授 (40026555)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥4,000,000 (Direct Cost: ¥4,000,000)
Fiscal Year 2002: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2001: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2000: ¥2,600,000 (Direct Cost: ¥2,600,000)
KeywordsMicrobial Desulfurization / Rhodococcus / Dibenzothiophene / Microbial desulfurization / Bacillus / Molecular chaperon / Desulfurization / Flavin reductase
Research Abstract

The mesophilic desulfurizing bacterium, Rhodococcus erythropolis D-1, has an ability of desulfurizing dibenzothiophene (DBT), the model compound for the microbial desulfurization, to form 2-hydoxybiphenyl (2-HBP). The enzyme system of DBT desulfurization consists of DszC, DszA, and DszB attacking DBT and its metabolites. Moreover, flavin reductase (FR) is essential for the activities of DszC and DszA. In this study, FR and DszB were studied.
FR was purified from R. erythropolis D-1 to homogeneity. The enzyme was tetramer, and the molecular mass of subunit was 22kDa. The enzyme had a strict substrate specificity and showed a high thermostability. The recombinant Escherichia coli strain overproduced FR, and the specific activity increased higher 275 times than the wild strain.
At first, the purification of DszB was tried form R. erythropolis D-1. But the pure enzyme could not be prepared because of the instability. Next, the recombinant strain was constructed. Because the inclusion body was formed when the expression vector was used, the DszB gene was coexpressed with the molecular chaperon genes, groELgroES. The purified enzyme was prepared from the recombinant E. coli. It was demonstrated that DszB cleaved the C-S bond of aromatic compound without any other proteinic component and cofactor.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report

Research Products

(25 results)

All Other

All Publications (25 results)

  • [Publications] N.Nakayama, T.Matsubara, T.Ohshiro, Y.Moroto, Y.Kawata, K.Koizumi, Y.Hirakawa, M.Suzuki, K.Maruhashi, Y.Izumi, R.Kurane: "A novel enzyme 2'-hydroxybiphenyl-2-sulfate desulfinase (DszB), from a dibenzothirophene-desulfurizing bacterium Rhodococcus erythropolis KA2-5-1 : gene overexpression and enzyme characterization"Biochem.Biophys.Acta. 1598. 122-130 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Ohshiro, Y.Aoi, K.Torii, Y.Izumi: "Flavin reductase coupling with two monooxygenases involved in dibenzothiophene desulfurization : purification and characterization from a non-desulfurizing bacterium, Paenibacillus polymyxa A-1"Appl.Microbiol.Biotechnol.. 59. 649-657 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Ohshiro, Y.Izumi: "Desulfurization of fossil fuels"Encyclopedia of Environmental Microbiology. 1041-1051 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] O.Yoshikawa, Y.Ishii, K.Koizumi, T.Ohshiro, Y.Izumi, K.Maruhashi: "Enhancement and stabilization of desulfurization activity Rhodococcus erythropolis KA2-5-1 by feeding ethanol and sulfur components"J.Biosci.Bioeng.. 94. 447-452 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Matsubara, T.Ohshiro, Y.Nishina, Y.Izumi: "Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1"Appl.Environ.Microbiol.. 67. 1179-1185 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Izumi, T.Ohshiro: "Purification and characterization of enzyme involved in desulfurization of dibenzothiophene in fossil fuels"J.Mol.Catalysis-B-Enzymatic. 11. 1061-1064 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N. Nakayama, T. Matusbara, T. Ohshiro, Y. Moroto, Y. Kawata, K. Koizumi, Y. Hirakawa, M. Suzuki, K. Maruhashi, Y. Izumi, and R. Kurane: "A novel enzyme, 2-hydroxybiphenyl-2-sulfinate desulfinase (DszB), from a dibenzothiophene-desulfurizing bacterium Rhodococcus erythropolis KA2-5-1: gene overexpression and enzyme characterization"Biochem. Biophys. Acta.. 1598. 122-130 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Ohshiro, Y. Aoi, K. Torii, and Y. Izumi: "Flavin reductase coupling with two monooxygenases involved in dibenzothiophene desulfurization: purification and characterization from a nondesulfurizing bacterium, Paenibacillus polymyxa A-1"Appl. Microbiol. Biotechnol.. 59. 649-657 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Ohshiro and Y. Izumi: "Desulfurization of fossil fuels"Encyclopedia of Environmental Microbiology. 1041-1051 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] O. Yoshikawa, T. Ohshiro, Y. Nishina, and Y. Izumi: "Enhancement and stabilization of desulfurization activity of Rhodococcus erythropolis KA2-5-1 by feeding ethanol and sulfur components"J. Biosci. Bioeng.. 94. 447-452 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Matsubara, T. Ohshiro, Y. Nishina, and Y. Izumi: "Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1"Appl. Environ. Microbiol.. 67. 1179-1185 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y. Izumi and T. Ohshiro: "Purification and characterization of enzyme involved in desulfurization of dibenzothiophene in fossil fuels"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.NaKayama, T.Matsubara, T.Ohshiro, Y.Moroto, Y.Kawata, K.Koizumi, Y.Hirakawa, M.Suzuki, K.Maruhashi, Y.Izumi, R.Kurane: "A novel enzyme, 2'-hydroxybiphenyl-2-sulfinate desulfinase (DszB), from a dibenzothiophene-desulfurizing bacterium Rhodococcus erythropolis KA2-5-1 : gene overexpression and enzyme characterization"Biochim. Biophys. Acta. 1598. 122-130 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Ohshiro, Y.Aoi, K.Torii, Y.Izumi: "Flavin reductase coupling with two monooxygenases involved in dibenzothiophene desulfurization : purification and characterization from a non-desulfurizing bacterium, Paenibacillus polymyxa A-1"Appl. Microbiol. Biotechnol.. 59. 649-657 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] O.Yoshikawa, Y.Ishii, K.Koizumi, T.Ohshiro, Y.Izumi, K.Maruhashi: "Enhancement and stabilization of desulfurization activity of Rhodococcus erythropolis KA2-5-1 by feeding ethanol and sulfur components"J. Biosci. Bioeng.. 94. 447-452 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Ohshiro, Y.Izumi: "Desulfurization of fossil fuels"Encyclopedia of Environmental Microbiology. 1041-1051 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Ohshiro, W.Hemrika, T.Aibara, R.Wever, Y.Izumi: "Expression of the vanadium-dependent bromoperoxidase gene from a marine macro-alga Corallina pilulifera in Saccharomyces cerevisiae and characterization of the recombinant enzyme"Phytochemistry. 60. 595-601 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Izumi, T.Ohshiro: "Purification and characterization of enzyme involved in desulfurization of dibenzothiophene in fossil fuels"J.Mol.Catalysis-B-Enzymatic.. 11. 1061-1064 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Matsubara, T.Ohshiro, Y.Nishina, Y.Izumi: "Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1"Appl.Environ.Microbiol.. 67. 1179-1184 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] W.E.Karsten, T.Ohshiro, Y.Izumi, P.F.Cook: "Initial velocity, spectral, and pH studies of the serine-glyoxilate aminotransferase from Hyphomicrobium methylovorum"Arch.Biochem.Biophys.. 388. 267-275 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Matsubara,T.Ohshiro,Y.Nishina,and Y.Izumi: "Purification, characterization, and overexpression of flavin reductase involved in dibenzothiophene desulfurization by Rhodococcus erythropolis D-1"Appl.Environ.Microbiol.. 67. 1179-1184 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Ohshiro and Y.Izumi: "Purification, characterization and crystallization of enzymes for dibenzothiophene desulfurization"Bioseparation. 9. 185-188 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Ishii,T.Ohshiro,Y.Aoi,M.Suzuki,and Y.Izumi: "Identification of the gene encoding a NAD (P) H flavin reductase coupling with dibenzothiophene (DBT)-desulfurizing enzymes from the DBT-nondesulfurizing bacterium Paenibacillus polymyxa A-1"J.Biosci.Bioeng.. 90. 220-222 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Furuya,H.Sawada,T.Hirahara,K.Ito,T.Ohshiro,Y.Izumi: "A Novel enzyme, L-tryptophan oxidase, from a basidiomycete, Coprinus sp.SF-1 : Purification and characterization"Biosci.Biotechnol.Biochem.. 64. 1486-1493 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 和泉好計,大城隆: "微生物による石油の脱硫-実用化プロセスに有用な代謝系と酵素-"酵素工学ニュース. 44. 9-14 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-03-31   Modified: 2016-04-21  

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