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Grant-n-Aid for Scientific Research(C)(2)

Research Project

Project/Area Number 12660091
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionOkayama University of science

Principal Investigator

HATTA Takashi  Okayama University of Science,Reserch Institute of Science,Assistant Professor, 技術科学研究所, 助教授 (00218497)

Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2001: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2000: ¥2,500,000 (Direct Cost: ¥2,500,000)
KeywordsPCB / thermophile / gene analysis / degrading enzyme / degrading gene / PCB degradation / 環境汚染物質 / 好熱性菌 / クローニング
Research Abstract

Bacillus sp.JFS is thermophilic bacterium capable of degrading PCB. bphCgene encoding 23DHBPDO had been cloned from Bacillus sp. JF8.bphA.bphB, and bphD are sown to be located upstream of bpcC gene, and they are cloned and sequenced. bphR, bphD, bphA1, bphA2, and bphB genes were present upper stream of bphC. On the other hand, bphE, bphG, bphF genes were located downstream of bphC. Amino acid sequence ofBphAhad good similarity to known BphAofmethophilic PCB-degrading bacteria. However, BphD had similarity (about 35%) to XylF and TodEwhich are used in the monocyclic hydrocarbon degradation and had lower homology (about 20%) to BphD proteins responcible for the degradation ofPCB. This character ofBphD have tendency to that ofBphC.Interestingly, IS sequence and transposase were present upstream ofbphR and this result shows that these PCB-<iegrading genes might be transferred from other microorganisms. N-terminal amino acid sequences of23DHBPDO and HOPDA, which are purified from Bacillus sp.JFS grown on biphenyl, were identical to those of deduced amino acid sequences from nucleotide sequence of these proteins. This result indicate that these two proteins are responsible for the degradation ofbiphenyl.
BphCand BphD proteins have high stability toward temperature reflecting thermophilic bacterium, and toward inhibitors. BphC have broad substrate specificity, on the contrary BphD was specific for HOPDAnot for HMSAor HOHD. Both enzymes had low Km value (1/ 10) compared to mesophilic enzymes.Interestingly, BphChad Mn in theprotein instead ofFe, whichis used in 23DHBPDO of mesophilic bacteria.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] T.Hatta, M.Gouri, K.Kimbara: "Purification and Characterization of 2,3-from Thermophilic PCB-Degrading Bacillus Dihydroxybiphenyl Dioxygenase from Thermophilic PCB-Degrading Bacillus sp.JF8"Bull.Res.Inst.of Tech., Okayama Univ. of Sci.. 20. 62-65 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Nandhagopal, A.Yamada, T.Hatta, E.Masai, M.Fukuda, Y.Mitsui, T.Senda: "Crystal structure of 2-hydoroxy-o-oxo-o-phenyinexa-2,4-dienoic acid (HPDA) hydrolase (BphD enzyme) from the Rhodococcus sp. strain RHA1 degradation pathway"J.Mcl.Biol. 309. 1139-1151 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Hatta, S.Kobatashi, E.Fujii, N.Takizawa, H.Kiyohara: "Analysis of Regulatory Gene involved in the Degradation of 2,4,6-Trichlorophenol in Ralstonia pickettii DTPO6O2"Bull.Res.Inst.of Tech., Okayama Univ.of Sci.. 19. 1-5 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Hatta, M.Gouri, and K.Kimbara.: "Purification and Characterization of 2, 3-Dihydroxybiphenyl Dioxygenase from Thermophilic PCB-Degrading Bacillus sp.JF8"Bull. Res. Inst. Of Tech. Okayama Univ. of Sci.. 20. 62-65 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Nandhagopal, A.Yamada, T.Hatta, E.Masai, M.Fukuda, Y.Mltsui, T.Senda.: "Crystal structure of 2-hydroxyl-6oxo-6-phenylhexa-2, 4-dienoic acid (HPDA) hydrolase (BphD enzyme) from the Rhodococcus sp. strain RHA1 of the PCB degradation pathway."J. Mol. Biol. 309.5. 1135-1151 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Hatta, S.Kobatashi, E.Fujii, N.Takizawa, and H.: "Analysis of Regulatory Gene involved in the Degradation of 2, 4, 6-Trichlorophenol in Rahtonia pickettii DTP0602"Bull. Res. Inst. Of Tech. Okayama Univ. of Sci.. 19. 1-5 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Hatta, M.Gouri, K.Kim bara: "Purification and Characterization of 2, 3-Dihydroxybiphenyl Dioxygenase from Thermophilic PCB-Degrading Bacillus sp. JF8"Bull. Res. Inst. of Tech., Okayama Univ. of Sci.. 20. 62-65 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] N.Nandhagopal, A.Yamada, T.Hatta, E.Masal, M.Fukuda, Y.Mitsui, T.Senda: "Crystal structure of 2-hydroxyl-6-oxo-6-phenylhexa-2, 4-dienoic acid (HPDA) hydrolase(BphD enzyme)from the Rhodococcus sp. strain RHA1 of the PCB degradation pathway"J. Mol. Biol.. 309・5. 1139-1151 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Hatta, S.Kobatashi, E.Fujii, N.Takizawa, H.Kiyohara: "Analysis of Regulatory Gene involved in the Degradation of 2, 4, 6-Trichlorophenol in Ralstonia pickettii DTP0602"Bull. Res. Inst. of Tech., Okayama Univ. of Sci.. 19. 1-5 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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