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Molecular taxonomy of intestinal bacteria from freshwater fish and its application

Research Project

Project/Area Number 12660180
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General fisheries
Research InstitutionNihon University

Principal Investigator

SUGITA Haruo  Nihon University, Faculty of Bioresource Sciences, Professor, 生物資源科学部, 教授 (50139052)

Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2001: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2000: ¥2,200,000 (Direct Cost: ¥2,200,000)
Keywordsfish / intestinal bacteria / 16S rRNA / FISH method / Phylogeny / culture technique / freshwater fish / antibacterial activity / 粘液付着性 / ティラピア / ソウギョ / 16SrRNA / キンギョ
Research Abstract

Intestinal bacteria of fish was investigated and the following results were obtained.
1. Phylogeny of intestinal bacteria isolated from goldfish were examined based on 16S rDNA sequences and they were divided into eight clusters : Aeromonas hydrophiila, Aeromonas sp., Citrobacter freundii, Shewanella sp., Vibrio sp., Vagococcus sp. and Fusobacteria and CFB group.
2. Similarly, intestinal bacteria from tilapia and grass carp were mainly classified into five clusters : Aeromonas veronii, Citrobacter freundii, Plesiomonas shigelloides, Fusobacteria and CFB group.
3. Cotrary to this, intestinal tract from Japanese flounder and red seabream were mainly divided into three clusters : Vibrio fischeri, V. scophthalmi and V. carchiae.
4. Bacterial populations in goldfish feces were analyzed with fluorescentl in situ hybridization method and it was found that goldfish harbors α-, β- and γ-Proteobacteria at high densities. Probes AER66 and BAC303 could detect Aeromonas and Bacteroides type A, respectively.
5. Antibacterial abilities of intestinal bacteria from Japanese flounder were determined using 4 fish pathogens, and it was found that 1.7-24.3% of intestinal bacteria possess the activities.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (27 results)

All Other

All Publications (27 results)

  • [Publications] H.Sugita, M.Sakamoto, Y.Shirasu, A.Takizawa, N.Mano, R.Nakashima: "Neuraminidase-producing bacteria from the intestinal tract of coastal fish"水産増殖. 49(4). 511-512 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, M.Asfie: "Goldfish intestinal microflora determined with fluorescently labeled rRNA-target oligonucleotide probes"Proceedings of the International Commemorative Symposium of the 70^<th> Anniversary of the Japanese Society of Fisheries Science. (印刷中). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] C.Tsuchiya, T.Sagesaka, Y.Ito, T.Yamaguchi, H.Sugita: "Identification of goldfish intestinal bacteria 16S ribosomal DNA sequence analysis"水産増殖. 50(印刷中). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, R.Okano, Y.Suzuki, D.Iwai, N.Akiyama, S.Matsuura: "Antibacterial abilities of intestinal bacteria from larval and juvenile Japanese flounder against fish pathogen"Fisheries Scienece. 68(印刷中). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Asfie, T.Ishigaki, R.Okano, N.Akiyama, H.Sugita: "Antibacterial abilities of microflora in the Japanese flounder-rearing aquaria"水産増殖. 48(2). 227-231 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, Y.Shinagawa, R.Okano: "Neuraminidase-producing ability of intestinal bacteria isolated from coastal fish"Letters in Applied Microbiology. 31. 10-13 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 石田祐三郎, 杉田治男(編著): "海洋環境アセスメントのための微生物実験法"恒星社厚生閣. 198 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, R.Ueda, K.Yoshihara, N.Taniguchi(編集): "A New Paradim for Aquaculure 3"日本水産増殖学会. 67 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 杉田治男(共著): "海洋微生物(月刊海洋、号外No.23)"海洋出版. 263 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, Y.Deguchi(共著): "Spiny Lobsters : Fisheries and Cultures, 2^<nd> edition"Blackwell. 679 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M. Asfie, T. Ishigaki, R. Okano, N. Akiyama and H. Sugita: "Antibacterial abilities of microflora in the Japanese flounder-rearing aquaria"Suisanzoshoku. 48(2). 227-231 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita, Y. Shinagawa, and R. Okano: "Neuraminidase-producing ability of intestinal bacteria isolated from coastal fish"Lett. Appl. Microbiol.. 31. 10-13 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita, M. Sakamoto, Y. Shirasu, A. Takizawa, N. Mano and R. Nakashima: "Neuraminidase-producing bacteria from the intestinal tract of coastal fishes"Suisanzoshoku. 49(4). 511-512 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita and M. Asfie: "Goldfish intestinal microflora determined with fluorescently labeled rRNA-target oligonucleotide probes"Proceedings of the International Commemorative Symposium of the 70th Anniversary of the Japanese Society of Fisheries Science. (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] C. Tsuchiya, T. Sagesaka, Y. Ito, T. Yamaguchi and H. Sugita: "Identification of goldfish intestinal bacteria by 16S ribosomal DNA sequence analysis"Suisanzoshoku. 50 (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita, R. Okano, Y. Suzuki, D. Iwai, M. Mizukami, N. Akiyama and S. Matsuura: "Antibacterial abilities of intestinal bacteria from larval and juvenile Japanese flounder against fish pathogen"Fisheries Science. 68 (in press). (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Y. Ishida and H. Sugita(Eds): "Method in Aquatic Microbiology for Environmental Assessment (in Japanese)"Koseisha-Koseikaku. 198

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita, R. Ueda, K. Yoshihara and T. Taniguchi (Eds): "A New Paradigm for Aquaculture 3. (in Japanese)"Japan Aquaculture Society. 67

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita: "Marine Microorganisms (ed by K. Ohwada) (in Japanese)"Kaiyo Shuppan. 263

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Sugita and Y. Deguchi: "Spiny Lobsters : Fisheries and Culture, 2nd edition (ed by B.F. Phillips and J. Kitytaka)"Blackwell. 679

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Sugita, M.Sakamoto, Y.Shirasu, A.Takizawa, N.Mano, R.Nakashima: "Neuraminidase-producing bacteria from the intestinal tract of coastal tract"水産増殖. 49(4). 511-512 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Sugita, M.Asfie: "Goldfish intestinal microflora determined with fluorescently labeled rRNA-target oligonucleotide probes"Proceedings of the International Commemorative Symposium of the 70^<th> Anniversary of the Japanese Society of Fisheries Science. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] C.Tsuchiya, T.Sagesaka, Y.Ito, T.Yamaguchi, H.Sugita: "Identification of goldfish intestinal bacteria 16S ribosomal DNA sequence analysis"水産増殖. 50(印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] M.Asfie,T.Ishigaki,R.Okano,N.Akiyama,and H.Sugita: "Antibacterial abilities of microflora in the Japanese flounder-rearing aquaria"水産増殖. 48・2. 227-231 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Sugita,Y.Shinagawa and R.Okano: "Nueuraminidase-producing ability of intestinal bacteria isolated from coastal fish"Letters in Applied Microbiology. 31. 10-13 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 杉田治男: "魚類の腸内細菌"月刊海洋. 号外23. 214-218 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 石田祐三郎,杉田治男(編著): "海洋環境アセスメントのための微生物実験法"恒星社厚生閣. 198 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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