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Analysis of DNA binding specificity in homeodomains (1-4) of ATBF1

Research Project

Project/Area Number 12670108
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionTOYAMA MEDICAL AND PHARMACEUTICAL UNIVERSITY

Principal Investigator

KAWAGUCHI Makoto  Toyama Medical and Pharmaceutical University, Faculty of Medicine Research Associate, 医学部, 助手 (50204699)

Co-Investigator(Kenkyū-buntansha) SASAHARA Masakiyo  Toyama Medical and Pharmaceutical University, Faculty of Medicine Professor, 医学部, 教授 (20154015)
Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2001: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2000: ¥1,400,000 (Direct Cost: ¥1,400,000)
KeywordsATBF1 / homeodomain / zinc finger / ATPase / ZFH-4 / AFP-producing gastric cancer / DNA結合特異性
Research Abstract

DNA/RNA-dependent ATPase activity is associated with ATBF1, a multiple homeodomain-zinc finger protein (Biochimica et Biophysica Acta). We examined whether ATPase activity is associated with the ATBF1 molecule. A 263-amino acid segment of the ATBF1 molecule, termed AHZ, which contains the ATPase A-motif, homeodomain IV and zinc finger 21, was expressed in E.coli as the form of GST fusion protein and analyzed for ATPase activity. We found that AHZ was able to hydorolyze ATP and had ability to bind both DNA and RNA. The ATPase activity associated with ATBF1 is DNA/RNA-dependent and unique in that it requires both homeodomain and zinc finger motifs.
The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers (Biochem. Biophys. Res. Commun). We isolated the mouse zfhi-4 cDNA which is 12 kb long and capable of encoding a 3,550-amino acid protein containing four homeodomains and 22 zinc fingers including two pseudo zinc finger motifs. The mouse ZFH-4 is 51% homologous to th … More e mouse ATBF 1. RT-PCR analysis of zfh-4 transcripts in adult mouse tissues show that zfh-4 expression was detectable in brain, heart, lung and muscle. In these mouse tissues, ATBF1 transcripts were poorly amplified by PCR under the condtions where zfh-4 transcripts were amplified, suggesting that the expression of zfh-4 mRNA is higher than that ofATBF1 mRNA.
Alpha-fetoprotein (AFP) producing gastric cancer lacks transcription factor ATBF 1 (Oncogene). We investigated AFP gene regulation in AFP-producing gastric cancer by an active transcription factor, hepatocyte nuclear factor 1 (HNF1) and a repressive transcription factor, ATBF1. Rnase protection assays revealed that the production of AFP in gastric cancer cells did not directly associate with HNF1 expression. An inverse relation between the expressions of ATBF1 and AFP was clearly observed in gastric cancer cells. CAT assays showed the direct inhibition of AFP gene expression by ATBF1. Immunohistochemistry of clinical samples revealed that AFP-producing cells lacked ATBF1 immunoreactivity. Our data suggests that the absence of ATBF1 is responsible for AFP gene expression in gastric cancer, and the absence of ATBF1 is a distinct characteristic of AFP-producing gastric cancer and might be important for its highly malignant nature. Less

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (17 results)

All Other

All Publications (17 results)

  • [Publications] Oya T: "Platelet-derived growth factor-B expression induced after rat peripheral nerve injuries"Glia. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawaguchi M: "DNA/RNA-dependent ATPase activity is associated with ATBF1, a multiple homeodomain-zinc finger protein"Biochim Biophys Acta. 1550. 164-174 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamazaki K: "Simultaneous induction of galectin-3 phosphoylated on tyrosine residue p21(WAF1/Cip1/Sdi1), and the proliferating cell nuclear antigen at a distinctive period of repair of hepatocytes injured by CCl4"Biochem Biophys Res Commun. 280(4). 1077-1084 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kataoka H: "Alpha-fetoprotein producing gastric cancer lacks transcription factor ATBF1"Oncogene. 15, 20(7). 869-873 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Uotani H: "Non-Hodgkin's lymphoma of the ascending colon in a patient with Becker muscular dystrophy : Report of a case"Surg Today. 31. 1016-1019 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sakata N: "The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers"Biochem Biophys Res Commun. 5, 273(2). 686-693 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Oya T: "Platelet-derived growth factor-B expression induced after rat peripheral nerve injuries"Glia. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawaguchi M: "DNA/RNA-dependent ATPase activity is associated with ATBF1, a multiple homeodomain-zinc finger protein"Biochim Biophys Acta. 17,1550(2). 164-174 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yamazaki K: "SimuItaneous induction of galectin-3 phosphorylated on tyrosine residue, p21 (WAF1/Cip1/Sdi1), and the proliferating cell nuclear antigen at a distinctive period of repair of hepatocytes injured by CCl4"Biochem Biophys Res Commun. 2,280(4). 1077-1084 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kataoka H: "Alpha-fetoprotein producing gastric cancer lacks transcription factor ATBF1"Oncogene. 15,20(7). 869-873 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Uotani H: "Non-Hodgkin's lymphoma of the ascending colon in a patient with Becker muscular dystrophy. Report of a case"Surg Today. 15,20(7). 1016-1019 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sakata N: "The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers"Biochem Biophys Res Commun. 5,273(2). 686-693 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Oya T: "Platelet-derived growth factor-B expression induced after rat peripheral nerve injuries"Glia. (in press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kawaguchi M: "DNA/RNA-dependent ATPase activity is associated with ATBF1, a multiple homeodomain-zinc finger protein"Biochim Biophys Acta.. 1550. 164-174 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yamazaki K: "Simultaneous induction of galectin-3 phosphorylated on tyrosine residue, p21(WAF1/Cip1/Sdi1), and the proliferating cell nuclear antigen at a distinctive period of repair of hepatocytes injured by CC14"Biochem Biophys Res Commun.. 280(4). 1077-1084 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sakata N: "The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers."Biochem Biophys Res Commun.. 273(2). 686-693 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamazaki K: "Simultaneous Induction of Calectin-3 Phosphorylated on Tyrosine Residue, p21 (WAF1/Cip1/Sdi1), and the Proliferating Cell Nuclear Antigen at a Distinctive Period of Repair of Hepatocytes Injured by CC14."Biochem Biophys Res Commun.. 280(4). 1077-1084 (2001)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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