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STUDY ON STRUCTURE AND FUNCTION OF PREINTEGRATION COMPLEX OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1

Research Project

Project/Area Number 12670289
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Virology
Research InstitutionThe University of Tokyo (2001-2002)
National Institute of Infectious Diseases (2000)

Principal Investigator

KITAMURA Yoshihiro  The University of Tokyo, INSTITUTE OF MEDICAL SCIENCE, Associate Professor, 医科学研究所, 助教授 (10202037)

Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2002: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2001: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2000: ¥1,500,000 (Direct Cost: ¥1,500,000)
Keywordshuman immunodeficiency virus / INTEGRATION / INTEGRACE / VECTOR / ヒト免疫全ウルス / HIV / ini1 / SNF5 / アポトーシス / G1アレスト / 組み込み酵素 / 単クローン抗体
Research Abstract

To examine whether vectors based on human immunodeficiency virus type 1 (HIV) with viral central polypurine tract (cPPT) express transgenes more efficiently than those without cPPT, we constructed a series of vectors carrying a Neo'gene as a stable marker, which is driven by an internal synthetic thymidine kinase promoter. Insertion of cPPT, either 282bp or 178bp long, resulted in about 3-8-fold increase of the amount of produced vector particles. Insertion of the longer cPPT. resulted in decrease in transduction efficiency in about eight-fold, whereas insertion of the shorter resulted in increase in transduction efficiency in about two-fold independently of the orientation of the insert. Moreover, DNA-PCR showed that reverse transcription and nuclear import were cnot affected. Alu-PCR assay showed that integration was impaired in the vectors carrying the 282bp-cPPT. Taking these together, we concluded that insertion of the 282bp-cPPT decreased the number of 0418-resistant colonies without affecting nuclear import of vector DNA. We suppose that insertion of the 282bp-cPPT resulted in impairment of events after import, such as integration.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Miura T, Goto M, Hosoya N, Odawara T, Kitamura Y, Nakamura T, Iwamoto A.: "Depletion of mitochondrial DNA in HIV-1-infected patients and its ameliorationby antiretroviral therapy."J Med Virol. 70(4). 497-505 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakuma R, Kobayashi N, Ae K, Kitamura Y: "Inhibitory and enhancing effects of insertion of central polypurine tract sequence on gene expression with vectors derived from human immunodeficiency virus type 1."Biochem Biophys Res Commun. 302(3). 489-495 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamada T, Kaji N, Odawara T, Chiba J, Iwamoto A, Kitamura Y.: "Proline 78 is crucial for human immunodeficiency virus type 1 Nef to down-regulate class I human leukocyte antigen."J.Virol.. 77(2). 1589-94 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N, Nakamura HT, Goto M, Nakamura T, Nakamura K, Sugiura W, Iwamoto A, Kitamura Y.: "Polymorphisms and haplotypes of the CD209L gene and their association with the clinical courses of HIV-positive Japanese patients."Jpn J Infect Dis.. 55(4). 131-133 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takahashi T, Endo T, Nakamura T, Sakashitat H, Kimurat K, Ohnishit K, Kitamura Y, Iwamoto A.: "Dihydrofolate reductase gene polymorphisms in Pneumocystis carinii f.sp.hominis in Japan."J Med Microbiol.. 51(6). 510-515 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ae K, Kobayashi N, Sakuma R, Ogata T, Kuroda H, Kawaguchi N, Shinomiya K, Kitamura Y.: "Chromatin remodeling factor encoded by ini1 induces G1 arrest and apoptosis in ini1-deficient cells."Oncogene. 21(20). 3112-3120 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 北村義浩, 仲嶋一範(編著): "必ず上手くいく遺伝子導入と発現解析プロトコール"羊土社. 228 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Miura T, Gobo M, Hosoya N, Odawara T, Kitamura Y, Nakamura T, Iwamoto A.: "Depletion of mitochondrial DNA in HIV-1 infected patients and its ameliorationby antiretroviral therapy."J Med Virol. 70(4). 497-505

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakuma R, Kobayashi N, Ae K, Kitamura Y.: "Inhibitory and enhancing effects of insertion of central polypurine tract sequence on gene expression with vectors derived from human immunodeficiency virus type 1."Biochem Biophys Res Commun.. 302(3). 489-495 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamada T, Kaji N, Odawara T, Chiba J, Iwamoto A, Kitamura Y.: "J Virol"Proline 78 is crucial for human immunodeficiency virus type 1 Nefto down-regulate class I human leukocyte antigen?. 77(2). 1589-1594 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kobayashi N, Nakamura HT, Goto M, Nakamura T, Nakamura K, Sugiura W, Iwamoto A, Kitamura Y.: "PolymorPhisms and haPlotYPes of the CD2O9L gene and their association with the clinical courses of HIV positive Japanese patients."Jpn Jlnfect Dis. 55(4). 131-133 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takahashi T, Endo T, Nakamura T, Sakashitat H, Kimurat K, Ohnishit K, Kitamura Y, Iwamoto A.: "Dihydrofolate reductasegene polymorphisms in Pneumocystiscariniif. sp. hominis in Japan"J Med Microbiol. 51(6). 510-515 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ae K, Kobayashi N, Sakuma R, Ogata T, Kuroda H,. Kawaguchi N, Shinomiya K, Kitamura Y.: "Chromatin remodeling factor encoded by ini1 induces G1 arrest and apoptosis in ini1-deficient cells."Oncogene. 21(20). 3112-3120 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kitamura Y., Nakajima K.ed.: "KANARAZU UMAKUIKU IDENSHI DOUNYU TO HATUGEN KAISEKI PUROTOKORU"YODOSHA. 228 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ryuta Sakuma 他: "Inhibitory and Enhancing Effects of Central Polypurine Tract Sequence on Gene Expression with Vectors Based on Human immunodeficiency Virus Type 1"Biochemical and Biophysical Research Communications. 302(3). 489-495 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takeshi Yamada 他: "Proline 78 is crucial for human immunodeficiency virus type 1 Nef to down-regulate class I human leukocyte antigen"Jounal of Virology. 77(2). 1589-1594 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Noriko Kobayashi 他: "Polymorphisms and haplotypes of the CD2O9L gene and their association with the clinical courses of HIV-positive Japanese patients"Japan Journal of Infectious Diseases. 55(4). 131-133 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takashi Takahashi 他: "Dihydrofolate reductase gene polymorphisms in Pneumocystis carinii f. sp. hominis in Japan"Journal of Medical Microbiology. 51. 510-515 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Keisuke Ae: "chromatin remodeling factor encoded by ini1 gene induces G1 arrest and apoptosis in ini1-deficient cells"Oncogene. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Xiaomi Xin,Koichiro Nakamura,Huanliang Liu,Emi,E.Nakayama,Mieko Goto,Yoshiyuki Nagai,Yoshihiro Kitamura,Tatsuo Shioda,and Aikichi Iwamoto: "Novel polymorphisms in Human Macrophage Inflammatory Protein-1 alpha (MIP-1a) Gene"Genes and Immunity. 2(in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Noriko Kobayashi,and Yoshihiro Kitamura: "Retroviral integrase but not sequence of donor long terminal repeats determines target site preference for viral integration in vitro"Jpn.J.Inf.Dis.. 53(in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Toshihiko Ogata,Nobuo Okui,Ryuta Sakuma,Noriko Kobayashi,and Yoshihiro Kitamura: "Integrase of human endogenous retrovirus K-10 supports replication of replication-incompetent Int-human immunodeficiency virus type 1 mutant"Jpn.J.Inf.Dis.. 52. 251-252 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nobuo Okui,Noriko Kobayashi,Ryuta Sakuma,Hiroshi Yoshikura,Tadaichi Kitamura,Joe Chiba,and Yoshihiro Kitamura: "Packageable antiviral therapeutics against human immunodeficiency virus type 1 : virion-targeted virus inactivation by incorporation of a single-chain antibody against viral"Hum.Gene Ther.. 11. 537-546 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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