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The state of DNA methylation in the promoter regions of the human red cell membrane protein genes

Research Project

Project/Area Number 12671014
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Hematology
Research InstitutionKawasaki Medical School

Principal Investigator

WADA Hideho  Division of Hematology, Department of Medicine, Kawasaki Medical School, Assistant professor, 医学部, 講師 (70191830)

Co-Investigator(Kenkyū-buntansha) YAWATA Yoshihito  Department of Care Work, Kawasaki College of Allied Health Professions, Professor, 介護福祉科, 教授 (70069011)
SUGIHARA Takashi  Division of Hematology, Department of Medicine, Kawasaki Medical School, Professor, 医学部, 教授 (60140505)
山田 治  川崎医科大学, 医学部, 助教授 (50104790)
賀来 万由美  川崎医科大学, 医学部, 助手 (20319940)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2002: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2001: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2000: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsDNA methylation / promoter / red cell membrane / protein 4.2 / β-spectrin / band3 / UT-7 / Epo / 5'-CpG-3' sites / DNA meth lation / β-sectrin / methylation / protein4.2 / band3 / 5'-CpG-3'sites
Research Abstract

The state of methylation of the 5'-CpG-3' sites is known to be linked to the regulation of promoter function by modulating DNA-protein interactions and to the structure of chromatin. As part of a project to determine methylation patterns in the human genome, the methylation profiles were examined in genes for the human erythroid membrane proteins; protein 4.2 (P4.2), gene (ELB42), band 3 (B3), gene (EPB3), and β -spectrin (β -Sp), gene (SPTB). The bisulfite protocol of the genomic sequencing method was applied. (1) In the DNA from peripheral white blood cells, the promoter regions of EPB3 and ELB42 were extensively methylated, but the promoter of SPTB was totally unmethylated. (2) During erythroid differentiation, (I) ELB42 was unmethylated in DNAs from the cell line UT-7/Epo, but became methylated (55-93%) in cultured erythroblasts from peripheral BFU-E. The Mrna from ELB42 was first detected in early erythroblasts and protein 4.2 was expressed in late erythroblasts. (ii) EPB3 was consistently methylated in UT-7/Epo and also in cultured erythroblasts from burst forming unit erythroid (BFU-E) from peripheral blood. EPB3 and ELB42 were efficiently transcribed in UT-7 cells only after erythropoietin stimulation. (iii) SPTB remained unmethylated in DNAs from UT-7/Epo and cultured erythroblasts. (3) We also investigated methylation profiles in peripheral white blood cells from patients with erythroid diseases, like complete P4.2 deficiency due to ELB42 mutations, hereditary spherocytosis with EPB3 mutations, and hereditary elliptocytosis with SPTB mutations. The methylation profiles of the promoter regions of these three genes were essentially identical to those in healthy individuals

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] Yawata, Y.: "Protein 4.2 : normal and abnormal in clinical hematology, protein chemistry, molecular genetics, and structure"Kawasaki Med.J.. 26. 35-82 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yawata, Y.: "Characteristic features of genotype and phenotype of hereditary spherocytosis in the Japanese population"Tnt.J.Hematol.. 71. 118-135 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yawata, Y.: "Genotypic and phenotypic expressions of protein 4.2 in human erythroid cells"Gene Function and Disease. 2. 1-21 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Nakanishi, H.: "Ankyrin gene mutations in Japanese patients with hereditary spherocytosis"Int.J.Hematol.. 73. 54-63 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 和田 秀穂: "Gene methylationと赤血球膜蛋白の発現調節"臨床血液. 42・5. 390-392 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Remus, R.: "The state of DNA methylation in the promotor regions of the human red cell membrane protein (band 3, protein 4.2, and β-spectrin) genes"Gene Function and Disease. 2。4. 171-184 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 八幡 義人: "血液病アトラス(三刷増補版)"南江堂(東京). 212 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] "Protein 4.2: normal and abnormal in clinical hematology, protein chemistry, molecular genetics, andstructure"Kawasaki Med. J. 26. 35-82 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] "Characteristic features of genotype and phenotype of hereditary spherocytosis in the Japanese population"Int. J. Hematol. 71. 118-135 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] "Genotypic and phenotypic expressions of protein 4.2 in human erythroid cells"Gene Function and Disease. 2. 1-21 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] "Ankyrin gene mutations in Japanese patients with hereditaryspherocytosis"Int. J. Hematol. 73. 54-63 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] "The state of DNA methylation in the promotor regions of the human red cell membrane protein (band 3, protein 4.2, and β-spectrin) genes"Gene Function and Disease. 2・4. 171-184 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yawata, Y.: "Protein 4.2 : normal and abnormal in clinical hematology, protein chemistry, molecular genetics, and structure"Kawasaki Med. J.. 26. 35-82 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yawata, Y.: "Characteristic features of genotype and phenotype of hereditary spherocytosis in the Japanese population"Int. J. Hematol.. 71. 118-135 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yawata, Y.: "Genotypic and phenotypic expressions of protein 4.2 in human erythroid cells"Gene Function and Disease. 2. 1-21 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Nakanishi, H.: "Ankyrin gene mutations in Japanese patients with hereditary spherocytosis"Int. J. Hematol.. 73. 54-63 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] 和田 秀穂: "Gene methylationと赤血球膜蛋白の発現調節"臨床血液. 42・5. 390-392 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Remus, R.: "The state of DNA methylation in the promotor regions of the human red cell membrane protein (band 3, protein 4.2, and β-spectrin) genes"Gene Function and Disease. 2・4. 171-184 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 八幡 義人: "血液病アトラス(三刷増補版)"南江堂(東京). 212 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yawata, Y.: "Characteristic features of genotype and phenotype of hereditary spherocytosis in the Japanese population"Int. J. Hematol.. 71. 118-135 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yawata, Y.: "Genotypic and phenotypic expressions of protein 4.2 in human erythroid cells"Gene Function and Disease. 2. 1-21 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nakanishi, H.: "Ankyrin gene mutations in Japanese patients with hereditary spherocytosis"Int. J. Hematol.. 73. 54-63 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 和田 秀穂: "Gene methylationと赤血球膜蛋白の発現調節"臨床血液. 42・5. 390-392 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Remus, R.: "The state of DNA methylation in the promotor regions of the human red cell membrane protein (band 3, protein 4.2, and β-spectrin) genes"Gene Function and Disease. 2・4. 171-184 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] 八幡 義人: "血液病アトラス(三刷増補版)"南江堂(東京). 212 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yawata,Y.: "Characteristic features of genotype and phenotype of hereditary spherocytosis in the Japanese population."Int.J.Hematol.. 71. 118-135 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yawata,Y.: "Genotypic and phenotypic expressions of protein 4.2 in human erythroid cells."Gene Function and Disease. 2. 1-21 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nakanishi,H.: "Ankyrin gene mutations in Japanese patients with hereditary spherocytosis."Int.J.Hematol.. 73. 54-63 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Remus,R.: "The dynamic state of DNA methylation in the promoter regions of the human red cell membrane protein (band 3, protein 4.2 and β-spectrin) genes."Blood. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 和田秀穂: "Gene methylationと赤血球膜蛋白の発現調節"臨床血液. 42. (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 八幡義人: "血液病アトラス(三刷増補版)"南江堂(東京). 212 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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