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Genetic informations of gliomas by whole-genome analysis using genome microarray

Research Project

Project/Area Number 12671356
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Cerebral neurosurgery
Research InstitutionOsaka University

Principal Investigator

MARUNO Motohiko  Osaka Univ., Medical School, Lecturer, 医学系研究科, 講師 (10263287)

Co-Investigator(Kenkyū-buntansha) YOSHIMINE Toshiki  Osaka Univ., Medical School, Professor, 医学系研究科, 教授 (00201046)
MORIUCHI Shusuke  Osaka Univ., Medical School, Assistant Professor, 医学系研究科, 助手 (90322180)
大西 丘倫  大阪大学, 医学系研究科, 助教授 (70233210)
Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2001: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2000: ¥2,400,000 (Direct Cost: ¥2,400,000)
KeywordsCGH microarray / gliomas / deletion / EGFR amplification / genetic informations / oncogene / microarray, / CGH, / glioblastoma,
Research Abstract

We attempted to define the genetic informations of gliomas using genome microsrray.
[Methods] The DNA copy number aberrations (CNAs) were detected by comparative genomic hybridization (CGH) in 52 gliomas including 37 glioblastomas and the observed gains in CNAs were further verified by DNA microarray analysis in 19 glioblastomas.
[Results] CNAs were detectable in all of the 37 samples analyzed and were mainly deletions and frequently involved Chromosomes lp (in 35% instances), 10 (54%), 19q (38%), and 22q (49%.). Gains in CNAs were frequently involved Chromosomes 7 (16%) and 8q (11%).
Genomic aberrations in human glioblastomas were deletions mainly and a few amplifications which were seen frequently in de novo type. In 19 cases DNA microarray analysis was performed against 58 oncogenes (AmpliOne I) using GenoSensor System (Vysis, Inc., Downers Grove, IL, USA). Amplification of EGFR (7pl2) were seen in 6 cases (31%), PDGFRA (4ql2) in 2 case (11%), MYC(8ql2) in 1 case (5%), and CCND/FGF4 (1 lq3) in one case. These amplifications were relatively strong ranged from 4 times to 32 times. The date about chromosome 7 from CGH and genome microarray was inconincidence. [Conclusion] It is apparent to get genetic informations casily and rapidly from clinical samples using microarray system It must be used not only in diagnosis but in order made therapy.

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Maruno M, et al.: "Profile of genetic aberrations in human glioblastomas : CGH and genomic microarray study"Proceedings of the American Asocciation for Cancer Research. 42. 654 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Maruno M, et al.: "Whole-genome analysis of human astroeytie tumors by comparative genomic hybridization"Brain Tumor Pathol. 17. 21-27 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Izumoto S, et al.: "PTEN mutaions in malignant gliomas and their relation with meningeal careinomatosis"J Neurooncol. 53. 21-26 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Isaka T, et al.: "Ultrastructul changes of the vascular endothelium alter intra intra-arterial administration of tumor necrosis factor-alpha (TNFa) in rat gliomas"J Neurooncol. 46. 145-150 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Jamshidi J, et al.: "Central neurocytoma presenting with intratumoral hemorrhage. a case report"Neurosurg Res. 24. 48-52 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kohmura E, et al.: "Usefulness of synaptophysin immunohistochemstry in an adult case of chroid plexus carcinoma"Neurol Res. 22. 478-480 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Maruno M, et al.: "Profile of genetic aberrations in human glioblastomas : CGH and genomic microarray study"Proceedings of Ihe American Association for Cancer Research. 42. 654 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Maruno M, et al.: "Whole-genome analysis of human astrocylic tumors by comparative genomic hybridization"Brain Tumor Pathol. 17. 21-27 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Izumoto S, et al.: "PTEN mutaions in malignant gliomas and their relation with meningeal carcinomatosis"J Neurooncol. 53. 21-26 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Isaka T, et al.: "Ultrastructul changes of the vascular endothelium after inlra-arterial administration of tumor necrosis factor-alpha (TNFa) in nil gliomas"J Neurooncol. 46. 145-150 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Jamshidi J, et al.: "Central neurocytoma presenting with intratumoral hemorrhage. a case report"Neurosurg Rev. 24. 48-52 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kohmura E, et al.: "Usefulness of synaptophysin immunohistochemstry in an adult case of chroid plexus carcinoma"Neurol Res. 22. 478-480 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Maruno M, et al.: "Profile of genetic aberrations in human glioblastomas : CGH and genomic microarray study"Proceedings of the American Asocciation for Cancer Research. 42. 654 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Maruno M, et al.: "Whole-genome analysis of human astrocytic tumors by comparative genomic hybridization"Brain Tumor Pathol. 17. 21-27 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Izumoto S, et al.: "PTEN mutaions in malignant gliomas and their relation with meningeal carcinomatosis"J Neurooncol. 53. 21-26 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Isaka T, et al.: "Ultrastructul changes of the vascular endothelium after intra-arterial administration of tumor necrosis factor-alpha(TNFa)in rat gliomas"J Neurooncol. 46. 145-150 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Jamshidi J, et al.: "Central neurocytoma presenting with intratumoral hemorrhage a case report"Neurosurg Rev. 24. 48-52 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kohmura E, et al.: "Usefulness of synaptophysin immunohistochemstry in an adult case of chroid plexus carcinoma"Neurol Res. 22. 478-480 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Maruno M, et al.: "Whole-genome analysis of human astrocytic tumors by comparative genomic hybridization."Brain Tumor Pathol. 17. 21-27 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Isaka T,Maruno M, et al.: "Ultrastructul changes of the vascular endothelium after intra-arterial administration of tumor necrosis factor-alpha (TNFα) in rat gliomas."J Neuro-Oncol. 46. 145-150 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Isaka T,Maruno M, et al.: "Effectiveness of spray application of ACNU in the local control of malignant gliomas : Report of two cases."Neurol Res. 22. 181-184 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Matsumura H, et al.: "Quantitative analysis of glioma cell invasion by confocal laser scanning microscopy in a novel brain slice model."Biochmical Biophysical Res Comm. 269. 513-520 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kohmura E,Maruno M, et al.: "Usefulness of synaptophysin immunohistochemstry in an adult of chroid plexus carcinoma."Neurol Res. 22. 478-480 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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