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Search for genetic factors associated with sleep and circadian rhythm disorders

Research Project

Project/Area Number 12672198
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human genetics
Research InstitutionThe University of Tokyo

Principal Investigator

HOHJOH Hirohiko  The University of Tokyo, Graduate School of Medicine, Assistant Professor, 大学院・医学系研究科, 助手 (60238722)

Co-Investigator(Kenkyū-buntansha) TOKUNAGA Katsushi  The University of Tokyo, Graduate School of Medicine, Professor, 大学院・医学系研究科, 教授 (40163977)
Project Period (FY) 2000 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2001: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2000: ¥2,200,000 (Direct Cost: ¥2,200,000)
Keywordssleep and circadian rhythm disorders / Narcolepsy / Geve association study / TNF-α / TNFR1 / TNFR2 / TNF・α
Research Abstract

Sleep and circadian rhythm disorders are thought to be multifactorial disordes involving various genetic and environmental factors. In this study, we investigated narcolepsy as a sleep disorder and delayed sleep phase syndrome (DSPS) and non-24-hour sleep wake syndrome (Non-24) as circadian rhythm disorders, and attempted to find genetic factors (genes) predisposing to these disorders. Gene association study was carried out using nucleotide variations in candidate genes for predisposing to the disorders as markers. Briefly, to search for nucleotide changes in such candidate genes, variation screening was carried out by means of PCR-SSCP and PCR-direct sequencing, and resultant nucleotide changes were used as markers in genotyping of the cases and controls. Using the typing data, we examined if there were any associations between the disorders and candidate genes investigated. The results in this study indicate that there is a significant association between human narcolepsy and either … More tumor necrosis factor-alpha (TNF-α) or TNF-α receptor 2 (TNFR2) gene, suggesting that the TNF-α-TNFR2 signal-transduction pathway could participate in the pathogenesis and pathophysiology of human narcolepsy. We further demonstrated that the ubiquitous transcription factor OCT-1 could bind to the functional single nucleotide polymorphism Q3NP) sites in the TNF-α gene promoter in an allele-specific manner. This suggest the possibility that the TNF-αexpression level modulated by the allelespecific binding of OCT-1 to such functional SNP sites could influence the predisposition to human narcolepsy. Another finding to note in this study is that the human leukocyte antigen (HLA) haplotype carrying DRB1^*1502-DQB1^*0601 has a negative association with human narcolepsy. This leads to the hypothesis that the haplotype could confer protection against narcolepsy.
As for the genetic factors predisposing to DSPS and Non-24, we have so far investigated c-Fos and N-acetyltransferase (NAT2) genes without association with the disorder. Further studies are required. Less

Report

(3 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • Research Products

    (27 results)

All Other

All Publications (27 results)

  • [Publications] H.Hohjoh et al.: "Significant association of the tumor necrosis factor receptor 2 (TNFR2) gene with human narcolepsy"Tissue Antigens. 56. 446-448 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Hohjoh et al.: "Case-control study with narcoleptic patients and healthy control who, like the patients, possess…"Tissue Antigens. 57. 230-235 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Hohjoh, K.Tokunaga: "Allele-specific binding of the ubiquitous transcription factor OCT-1 to the functional single…"Genes and Immunity. 2. 105-109 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H.Hohjoh et al.: "Negative association g the HLA DRB1^*1502-DQB1^*0601 haplotype with human narcolepsy"Immunogenetics. 52. 299-301 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Kawashima et al.: "Association studies y the tumor necrosis factor-alpha (TNFA) and its receptor I (TNFR1)"Korean J. Genetics. 23. 365-370 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Shishikura et al.: "Novel allele containing a 190cc→7) nonsynonymcus Substitution in the N-acetyltransferase (NAT2) gene"Human Mutation. 15. 581-581 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kawashima M, et al.: "Association studies of the tumor necrosis factor-alpha (TNFA) and its receptor 1 (TNFR1 ) and 2 (TNFR2) genes with human narcolepsy"Korean J Genet. 23. 365-370 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Hohjoh H, et al.: "Case-control study with narcoleptic patients and healthy controls who, like the patients, possess both HLA-DRB1^*1501 and-DOB1^*0602"Tissue Antigens. 57. 230-235 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Hohjoh H, Tokunaga K.: "Allele-specific binding of the ubiquitous transcription factor OCT-1 to the functional single nucleotide polymorphism (SNP) sites in the tumor necrosis factor-alpha gene (TNFA) promoter"Genes and Immunity,. 2. 105-109 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Hohjoh H, et al.: "Haplotype analyses with the human leukocyte antigen (HLA) and tumor necrosis factor-alpha (TNF-a) genes in narcolepsy"Psychiatry Clin Neurosci,. 55. 37-39 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Hohjoh H, et al.: "Negative association of the HLA-DRB1^*1502-DQB1^*0601 haplotype with human narcolepsy"Inrnunogenetics. 52. 299-301 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Chida S, et al.: "Haplotype specific sequence encoding protein kinase, interferon-inducible double stranded RNA dependent activator (PRKRA) in the human leukocyte antigen (HLA) class II region"Immunogenetics. 52. 186-194 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Miyagawa T, et al.: "Identification of a telomeric boundary of the HLA region with potential for predisposition to human narcolepsy"Immunogenetics. 52. 12-18 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Hohjoh H, et al.: "Significant association of the tumor necrosis factor receptor 2 (TNFR2) gene with human narcolepsy"Tissue Antigens. 56. 446-448 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Umino Y, et al.: "Novel single nucleotide polymorphisms (SNPs) at positions 497(T/G) and 829(T/C) in the human c-FOS gene and haplotype association"Human Mutation. 16. 279 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shihikura K, et al.: "Novel allele containing a 190(C->T) nonsynonymous substitution in the N-acetyltransferase (NAT2) gene"Hum Mutation. 15. 581 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] M.Kawashima et al.: "Association studies of the tumor necrosis factor-alpha (TNFA) and its receptor1 (TNFR1) and 2 (TNFR2) genes with .."Korean J. Genetics. 23. 365-370 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 北條浩彦, 徳永勝士: "病態解析とSNP:精神神経疾患(ナルコレプシー)"血液, 免疫, 腫瘍. 6. 38-42 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Hohjoh, K. Tokunaga: "Allele-specidic binding of the ubiquitous transcription factor OCT-1 to the functional single nucleotide .."Genes and Immunity. 2. 105-109 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Hohjoh et al.: "Case-control study with narcoleptic patients and healthy controls who, like the patients, possess .."Tissue Antigens. 57. 230-235 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Hohjoh et al.: "Negative association of the HLA-PRB1*1502-DQB1^* 0601 haplotype with human narcolepsy"Immunogenetics. 52. 299-301 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Hohjoh et al.: "Significant association of the tumor necrosis factor receptor 2(TNFR 2) gene with human narcolepsy."Tissue Antigens. 56. 446-448 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 北條浩彦: "睡眠異常の遺伝因子"遺伝. 54. 8-9 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Umino,H.Hohjoh,K.Tokunaga: "Novel single nucleotide polymorphisms (SNP_s) at positions 497(T/G) and 829 (T/C) in the human c-FOS gene and haplotype association."Human Mutation. 16. 279-279 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Shishikura,H.Hohjoh,と,Tokunaga: "Novel allele containing a 190 (C→T) nonsynonymous substitution in the N-acetyltransferase (NAT2) gene"Human Mutation. 15. 581-581 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Miyagawa,H.Hohjoh,Y.Honda K.Tokunaga: "Identification at a telomeric boundary of the HLA region with potential for predisposition to human narcolepsy"Immunogenetics. 52. 12-18 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y.Takahashi,H.Hohjoh,K.Matsuura: "Predisposing factors in delayed sleep phase syndrome"Psychiatry Clinical Neurosciences. 54. 356-358 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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