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DNA diagnosis by microchip capillary electrophoresis

Research Project

Project/Area Number 12672252
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory medicine
Research InstitutionShowa University

Principal Investigator

ARAKAWA Hidetoshi  Showa university, Pharmaceutical sciences, Associate professor, 薬学部, 助教授 (70129807)

Co-Investigator(Kenkyū-buntansha) ITO Katsutoshi  Showa university, Pharmaceutical sciences, Lecture, 薬学部, 講師 (20223141)
MAEDA Masako  Showa university, Pharmaceutical sciences, Professor, 薬学部, 教授 (00053869)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 2002: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2001: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2000: ¥2,500,000 (Direct Cost: ¥2,500,000)
Keywordsmicro chip electrophoresis / microchip / capillary electrophoresis / vero toxin / S. mutans / S. sobrinus / PCR / う食細菌 / Duplex PCR / 遺伝子診断 / S.mutanns / S.sobrinus / SSCP / 腸管出血性大腸菌
Research Abstract

Gene diagnosis is utilized as diagnoses such as hereditary disease and infectious disease, and as diagnoses method such as the prediction of drug metabolic ability. Generally the molecular biological technique utilizing in the laboratory is used as DNA analysis of gene diagnosis. However, the rapid and high sensitive DNA analysis has been required in infectious disease and tailor made medicine. Recently, as the method, DNA chip method is developed, and the use in the clinical field is being tried. In this study, microchip electrophoresis was developed as high sensitive and rapid DNA analytical method, and the establishment of gene diagnosis which analyze DNA polymorphism with the one point mutation, O157 ( intestinal hemorrhagic Escherichia coli ) and mutans streptococcus was carried out. Construction of micro chip and selection of the polymer which is used as the separation medium were carried out. As the result, it was possible to analyze the PCR product of the O157 verotoxin gene ( … More VT1 and VT2 ) using the channel of 30 μm depth and 100 μm width at separation length 1mm in slight10 seconds. And, in order to detect the one point mutation in the ras gene which is one of the oncogenes, the PCR was done mutation site, and next, SSCP (single-strand conformation polymorphism) analysis was carried out. In this study, separation media such as polymer and gel were mainly examined. As the result, the analysis of single nucleotide polymorphism (SNP) was difficult, though it was able to separate in the difference of large loop structure. Next, DNA diagnosis method of mutans streptococcus which existed in dental plaque, was developed as a diagnosis method of the dental treatment and care. Duplex allele specific PCR and common PCR for S. mutans and S. sobrinus were developed. And the obtained PCR products were analyzed by the imcrochip electrophoresis. By this method, these genes could be analyzed in 3 minutes. And, the detection limit was high sensitive of 20 fg. By the research of the above, the microchip electrophoresis seems to be the usefulness as a DNA detection method of the infectious disease which requires speedy DNA analysis. Less

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Yoshio Suzuki et al.: "The immunoassay of methotrexate by capillary electrophoresis with laser-induced fluorescence detection"Analytical Sciences. 19. 111-115 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hidetoshi Arakawa et al.: "Chemiluminescence assay for catechin based on generation of hydrogen peroxide in basic solution"Analytica Chimica Acta. 472. 75-82 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hidetoshi Arakawa et al.: "Detection of two variant Vero toxin genes in Escherichia coli by capillary electrophoresis"Biomedical Chromatography. 16. 41-46 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hidetoshi Arakawa et al.: "Single-strand conformation polymorphism analysis of Vitamin D receptor gene by capillary electrophoresis with laser-induced fluorescence detection"Analytica Chimica Acta. 445. 197-204 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kazuyuki Watanabe et al.: "Simultaneous analysis of two-site gene polymorphisms using time-resolved fluorescence immunoassay"Analytical Sciences. 16. 765-769 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Amane Kokado et al.: "New electrochemical assay of alkaline phosphatase using ascorbic acid 2-phosphate and its application to enzyme immunoassay"Analytica Chimica Acta. 407. 119-125 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y. Suzuki, H. Arakawa, and M. Maeda: "The immunoassay of methotrexete by capillary electrophoresis with laser-induced fluorescence detection"Anal. Sci. 19. 111-115 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A. Kokado, H. Arakawa, and M. Maeda: "Chemiluminescent assay of alkaline phosphatase using dihydroxyacetone phosphate as substrate detected with licigenin"Luminescence. 17. 5-10 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Watanabe, H. Arakawa and M. Maeda: "Simultaneous detection of two verotoxin genes using dual-label time-resolved fluorescence immunoassay with duplex-PCR"Luminescence. 17. 123-129 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Arakawa, K Watanabe, H. Kashiwazaki and M. Maeda: "Detection of two variant Vero toxin genes in Escheria coli by capillary electrophoresis"Biomed Chromatogi. 16. 41-46 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Arakawa, M. Kanemitsu, N. Tajima and M. Maeda: "Chemiluminescence assay for catechin based on generation of hydrogen peroxide in basic solution"Anal. Chim. Acta. 75-82 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] O. Imamura, H. Arakawa and M. Maeda: "Simple and rapid bioluminescent detection for allele specific PCR of E.coli O 157 : H7"Bioluminescence and Chemiluminescence. 395-398 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Arakawa, H. Igarashi, H. Kashiwazaki, M. Maeda, A. Tokita and Y. Yamashiro: "Single-stranded conformation polymorphism analysis of Vitamin D receptor gene by capillary etectrophoresis with laser-induced fluorescence detection"Anal. Chim. Acta. 455. 197-204 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M. Kanemitsu, H. Arakawa, R. Yoda and M. Maeda: "Chemiluminescent determination of lucigenin using thioureid derivatives"Anal Chim. Acta. 403. 125-130 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Sakagami, H. Arakawa, M. Maeda, K. Satoh, K. Kadofuku, K. Fukuchi and K. Gomi: "Production of hydrogen peroxide and methionine sulfoxide by epigalocatechin gallate and antioxidants"Anticancer Research. 21. 2633-2642 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Watanabe, M. Oda, H. Arakawa and M. Maeda: "Simultaneous analysis of two-site gene polymorphisms using time-resolved fluorescence immunoassay"Anal Sci.. 16. 765-769 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshio Suzuki: "The immunoassay of methotrexate by capillary electrophoresis with laser-induced fluorescence detection"Analytical Sciences. 19. 2003 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hidetoshi Arakawa, et al.: "Chemiluminescence assay for catechin based on generation of hydrogen peroxide in basic solution"Analytica Chimica Acta. 472. 75-82 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hidetoshi Arakawa, et al.: "Detection of two variant Vero toxin genes in Escherichia coli by capillary electrophoresis"Biomedical Chromatography. 16. 41-46 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hidetoshi Arakawa, et al.: "Single-strand conformation polymorphism analysis of Vitamin D receptor gene Bby capillary electrophoresis with laser-induced fluorescence detection"Analytica Chimica Acta. 445. 197-204 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kazuyuki Watanabe, et al.: "Simultaneous analysis of two-site gene polymorphisms using time-resolved fluorescence immunoassay"Analytical Sciences. 16. 765-769 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Amane Kokado, et al.: "New electrochemical assay of alkaline phosphatase using ascorbic acid 2-phosphate and its application to enzyme immunoassay"Analytica Chimica Acta. 407. 119-125 (2000)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hidetoshi Arakawa, et al.: "Detection of two variant Vero toxin genes in Escherichia coli by capillary electrophoresis"Biomedical Chromatography. 16. 41-46 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hidetoshi Arakawa et al.: "Single-strand conformation polymorphism analysis of Vitamin D receptor gene by capillary electrophoresis with laser-induced fluorescence detection"Analytica Chimica Acta. 445. 197-204 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kazuyuki Watanabe, et al.: "Simultaneous analysis of two-site gene polymorphisms using time-resolved fluorescence immunoassay"Analytical Sciences. 16. 765-769 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Amane Kokado, et al.: "New electrochemical assay of alkaline phosphatase using ascorbic acid 2-phosphate and its application to enzyme immunoassay"Analytica Chimica Acta. 407. 119-125 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Mahina Kanemitsu, et ak.: "Chemiluminescent determination of lucigenin using thioureid derivatives"Analytica Chimica Acta. 403. 125-130 (2000)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hidetoshi Arakawa, et al.: "Bioluminescent PCR-RFLP enzyme-linked immunosorbent assay for analysis of vitamin D receptor gene polymorphism"Analytical Sciences. 15. 943-949 (1999)

    • Related Report
      2001 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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