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Study on Pattern Inference from Positive Data

Research Project

Project/Area Number 12680391
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Intelligent informatics
Research InstitutionKyushu Institute of Technology

Principal Investigator

SHINOHARA Takeshi  Kyushu Institute of Technology, Department of Artificial Interlligence, Professor, 情報工学部, 教授 (60154225)

Co-Investigator(Kenkyū-buntansha) SUGIMOTO Norko  Kyushu Institute of Techrnology, Department of Artificial intelligence, Department of Artificial Intelligence, Assistant, 情報工学部, 教務職員 (80271120)
Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2002: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2001: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2000: ¥900,000 (Direct Cost: ¥900,000)
KeywordsInductive Inference / Machine Learning / Inductive Inference from Positive Data / Pattern Languages / Elementary Formal Systems / Efficiency of Learning / 正例からの帰納推論 / パターン照合
Research Abstract

The aim of this research is in investigating realizability of machine learning, by studying inductive inferece as a theoretical model of learning from examples. In general, examples using in learning are categorized in positive ones and negative ones. In language (or grammar) learning, positive examples are corresponding to (grammatically) correct sentences. Data obtained from experiments can be considered as positive examples of a certain property, when they are concernd with the property. In this research, we have considered theoretical limits of inductive learning based on positive examples and investigated efficient learning algorithms from the viewpoint of practical applications.
A pattern is a string consisting of constant symbols and variables. The language of a pattern is the set of constant strings obtained by. substituting nonempty constant strings for variables in the pattern. For any fixed k, the class of unions of at most k pattern languages is already shown to be inferable from positive data.
We apply a learning algorithm for pattern languages to discover a motif from amino-acid sequences. From only positive examples with the help of an alphabet indexing, the algorithm successfully finds sets of patterns, that can be considered as motifs.
We have also studied speed-up of language acceptors for elementary formal systems, where we employ fast string pattern matching machines. Finally, we propose a possible approach to extending leaning algorithms for multiple patterns.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Takeshi Shinohara: "Approximate Retrieval of High-dimensional Data with L_1 Metric by Spatial Indexing"New Generation Computing. 18. 39-47 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara: "Inductive Inference of Unbounded Unions of Pattern languages from Positive Data"Theoretical Computer Science. 241. 191-209 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Noriko Sugimoto: "Efficient Derivation for Elementary Formal Systems Based on Partial Unification"Proc.4th International Conference on Discovery Science,(LNAI 2006). 350-364 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Toshio Nishimura: "Speed-up of Aho-Corasick Pattern Matching Machines by Rearranging States"Proc.8-th Symposium on String Processing and Information Retrieval, IEEE Comput.Soc.. 175-185 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara: "On Dimension Reduction Mappings for Approximate Retrieval of Multi-dimensional Data"Progress Discovery Science, Final Report of the Japanese Discovery Science Project,(LNAI 2281). 224-231 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yen Kaow Ng: "The Discovery of Consensus Patterns"火の国情報シンポジウム2004予稿集. 8 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara, Jiyuan An, Hiroki Ishizaka: "Approximate Retrieval of High-dimensional Data with L_1 Metric by Spatial Indexing"New Generation Computing. Vol.18. 39-47 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara, Hiroki Arimura: "Inductive Inference of Unbounded Unions of Pattern Languages from Positive Data"Theoretical Computer Science. Vol.241:(1-2). 191-209 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Noriko Sugimoto, Hiroki Ishizaka, Takeshi Shinohara: "Efficient Derivation for Elementary Formal Systems Based on Partial Unification"Proc.4th International Conference on Discovery Science, (Lecture Notes in Artificial Intelligence Vol.2226). 350-364 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Toshio Nishimura, Shuichi Fukamachi, Takeshi Shinohara: "Speed-up of Aho-Corasick Pattern Matching Machines by Rearranging States"Proc.8-th Symposium on String Processing and Information Retrieval, IEEE Coinput.Soc. 175-185 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara, Hiroki Ishizaka: "On Dimension Reduction Mappings for Approximate Retrieval of Multi-dimensional Data"Progress Discovery Science, Final Report of the Japanese Discovery Science Project,(Lecture Notes in Artificial intelligence Vol.2281). 224-231 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yen Kaow Ng, Takeshi Shinohara: "The Discovery of Consensus Patterns"火の国情報シンポジウム2004予稿集,情報処理学会九州支部. (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshi Shinohara: "On dimension reduction mappings for approximate retrieval of multi-dimensional data"Lecture Notes in Artificial Intelligence Vol.2281. 224-231 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takeshi Shinohara: "Speed-up of Aho-Corasick Pattern Matching Machines by Rearranging States"Proceedings of 8^<th> International Symposium on String Processing and Information Retrieval. 175-185 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takeshi Shinohara: "An efficient derivation for Elementary Formal Systems based on partial unification"Discovery Science 2001. 350-364 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takeshi Shinohara: "Inductive inference of unbounded unions of pattern languages from positive data"Theoretical Computer Science(Netherlands). 241. 191-209 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Takeshi Shinohara: "Approximate retrieval of high-dimensional data with L_1 metric by spatial indexing"New Generation Computing. 18. 39-47 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Satoru Miyano: "Polynomial-time learning of elementary formal systems"New Generation Computing. 18. 217-242 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 谷口力昭: "複数文字列照合技法を用いたEFS処理系の実現"第14回人工知能学会全国大会. 161-166 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Shuichi Fukamachi: "Speed-Up of approximate string matching using lossy compression"Proceedings of the 10th European-Japanese Conference on Information Modeling and Knowledge bases. 262-263 (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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