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Investigation of reaction mechanism and higher oligomeric structure of Na-pump based on single-molecule observation technique.

Research Project

Project/Area Number 13142201
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

KAYA Shunji  Hokkaido Univ., Faculty of Sci., Associate Prof., 大学院理学研究科, 助教授 (90186023)

Co-Investigator(Kenkyū-buntansha) SUZUKI Hiroshi  Asahikawa Medical College, Prof, 医学部, 教授 (50183421)
HAYSHI Yutaro  Kyorin Univ., School of Medicine, Prof., 医学部, 教授 (10086556)
TANIGUCHI Kazuya  Hokkaido Univ., Faculty of Sci., Prof (2001-2003), 大学院理学研究科(平成13〜14年度), 教授 (40028204)
IMAGAWA Toshiaki  Hokkaido Univ., Faculty of Sci., Associate Prof. (2003-2006), 大学院理学研究科(平成15〜17年度), 助教授 (20142177)
Project Period (FY) 2001 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥69,900,000 (Direct Cost: ¥69,900,000)
Fiscal Year 2005: ¥10,500,000 (Direct Cost: ¥10,500,000)
Fiscal Year 2004: ¥11,800,000 (Direct Cost: ¥11,800,000)
Fiscal Year 2003: ¥13,500,000 (Direct Cost: ¥13,500,000)
Fiscal Year 2002: ¥16,400,000 (Direct Cost: ¥16,400,000)
Fiscal Year 2001: ¥17,700,000 (Direct Cost: ¥17,700,000)
KeywordsSodium Pump / Fluorescent Probe / Single-molecule observation / Proton Pump
Research Abstract

(1) Protomeric images of Na/K-ATPase and H/K-ATPase were observed by electron microsoopy(EM) after rotary-shadowing the solubilized enzyme preparation. Without cross-linking the preparation, dimeric and tetrameric molecules were detected by EM, indicating that the pump molecules are assembled in oligomer
(2) We have established the method for determining the oligomericity of P-type ATPases by means of single-molecule observation of fluorescently labeled enzyme using the total internal reflection fluorescence microscopy.
(3) Tetrameric structure of P-type ATPases has been determined not only Na/K-ATPase but also H/K-ATPase. In case ofH/K-ATPase, functional unit of the enzyme was shown to be tetraprotomer based on the relationship between the enzyme activity and the oligomeric structure.
(4) Analysis of the single mutations ofATP-binding region of Na/K-ATPase suggested that the ATPase molecule has one ATP binding site, which changes the affinity for ATP depending on the ligands present and the ATPase molecules form oligomer to maintain the interaction between them. We have estimated the third Na+ binding region of Na/K-ATPase at the first time.

Report

(6 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (43 results)

All 2006 2005 2003 2002 2001 Other

All Journal Article (32 results) Publications (11 results)

  • [Journal Article] Anti-parietal cell antibody and serum pepsinogen assessment in screening for gastric carcinoma.2006

    • Author(s)
      K.Sugiu
    • Journal Title

      Dig Liver Dis.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evaluation of an ELISA for detection of anti-parietal cell antibody2006

    • Author(s)
      K.Sugiu
    • Journal Title

      Hepatogastroenterology.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Anti-parietal cell antibody and serum pepsinogen assessment in screening for gastric carcinoma.2006

    • Author(s)
      K.Sugiu et al.
    • Journal Title

      Hepatogastroenterology. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] New evidence for ATP binding induced catalytic subunit interactions in pig kidney Na/K-ATPase.2006

    • Author(s)
      K.Tanoue et al.
    • Journal Title

      J. Biol. Chem. (submitted)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evaluation of an ELISA for detection of anti-parietal cell antibody.2006

    • Author(s)
      K.Sugiu et al.
    • Journal Title

      Hepatogastroenterology. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evidence for a relationship between activity and the tetraprotomeric assembly of solubilized pig gastric H/K-ATPase2005

    • Author(s)
      K.Abe
    • Journal Title

      The Journal of Biochemistry 138

      Pages: 293-301

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Thr-774 (Transmembrane Segment M5), Val-920 (M8), and Glu-954 (M9) Are Involved in Na^+ Transport, and GIn-923 (M8) Is Essential for Na,K-ATPase Activity.2005

    • Author(s)
      T.Imagawa
    • Journal Title

      The Journal of Biological Chemistry 280

      Pages: 18736-18744

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evidence for a relationship between activity and the tetraprotomeric assembly of solubilized pig gastric H/K-ATPase.2005

    • Author(s)
      K.Abe et al.
    • Journal Title

      J. Biochem. 138

      Pages: 293-301

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Thr-774 (Transmembrane Segment M5), Val-920 (M8), and Glu-954 (M9) Are Involved in Na+ Transport, and Gln-923 (M8) Is Essential for Na, K-ATPase Activity.2005

    • Author(s)
      T.Imagawa et al.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 18736-18744

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Transmembrane Segment M5),Val-920 (M8), and Glu-954 (M9) Are Involved in Na^+ Transport, and Gln-923 (M8) Is Essential for Na, K-ATPase Activivy2005

    • Author(s)
      T.Imagawa
    • Journal Title

      The Journal of Biological Chemistry 280

      Pages: 18736-18744

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Correlation between the activities and the oligomeric forms of pig gastric H/K-ATPase.2003

    • Author(s)
      K.Abe
    • Journal Title

      Biochemistry 42

      Pages: 15132-15138

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The amino acid sequence G442DASE446 in Na/K-ATPase is an important motif in forming high and low affinity ATP binding pocket.2003

    • Author(s)
      T.Imagawa
    • Journal Title

      The Journal of Biological Chemistry 278

      Pages: 50283-50292

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Oligomeric structure of P-type ATPases observed by single molecule detection technique2003

    • Author(s)
      S.Kaya
    • Journal Title

      Ann.N.Y.Acad.Sci. 986

      Pages: 278-280

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] K+ induced simultaneous liberation of two moles of Pi, one from one mole of EP and the other from EATP, of oligomeric H/K-ATPase from pig stomach2003

    • Author(s)
      K.Abe
    • Journal Title

      Ann.N.Y.Acad.Sci. 986

      Pages: 281-282

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Conformational change induced by tyrosine phosphorylation of the N-terminal domain of the □-chain of pig gastric H^+/K^+-ATPase2003

    • Author(s)
      N.Fujitani
    • Journal Title

      Biochem.Biopys.Res.Commun. 300

      Pages: 223-229

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Correlation between the activities and the oligomeric forms of pig gastric H/K-ATPase.2003

    • Author(s)
      K.Abe et al.
    • Journal Title

      Biochemistry 42

      Pages: 15132-15138

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The amino acid sequence G442DASE446 in Na/K-ATPase is an important motif in forming high and low affinity ATP binding pocket.2003

    • Author(s)
      T.Imagawa et al.
    • Journal Title

      J. Biol. Chem. 278

      Pages: 50283-50292

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Oligomeric structure of P-type ATPases observed by single molecule detection technique.2003

    • Author(s)
      S.Kaya et al.
    • Journal Title

      Ann. N.Y. Acad. Sci. 986

      Pages: 278-280

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] K^+ induced simultaneous liberation of two moles of Pi, one from one mole of EP and the other from EATP, of oligomeric H/K-ATPase from pig stomach.2003

    • Author(s)
      K.Abe et al.
    • Journal Title

      Ann. N.Y. Acad. Sci. 986

      Pages: 281-282

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Conformational change induced by tyrosine phosphorylation of the N-terminal domain of the a-chain of pig gastric H^+/K^+-ATPase.2003

    • Author(s)
      N.Fujitani et al.
    • Journal Title

      Biochem. Biopys. Res. Commun. 300

      Pages: 223-229

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Gastric H/K-ATPase liberates two moles of Pi from one mole of phosphoenzyme formed from a high-affinity ATP binding site and one mole of enzyme-bound ATP at the low affinity site during cross-talk between catalytic subunits.2002

    • Author(s)
      K.Abe
    • Journal Title

      Biochemistry 41

      Pages: 2438-2445

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Single replacement of several amino acid side chain exposed inside of the ATP binding pocket induces different extent of affinity change in the high and low affinity ATP binding sites of rat Na/K-ATPase2002

    • Author(s)
      S.Teramachi
    • Journal Title

      The Journal of Biological Chemistry 277

      Pages: 37394-37400

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Role of Anti-Parietal Cell Antibody in Helicobacter pylori-associated Atrophic Gastritis : Evaluation in a Country of High Prevalence of Atrophic Gastritis2002

    • Author(s)
      M.Ito
    • Journal Title

      Scandian.J.Gastroenterol. 162

      Pages: 287-293

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Serological comparison of serum pepsinogen and anti-parietal cell antibody levels between Japanese and German patients2002

    • Author(s)
      M.Ito
    • Journal Title

      Eur.J.Gastroenterol.Hepatol 14

      Pages: 1-5

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Implication of anti-parietal cell antibody levels gastrointestinal diseases, including gastric carcongenesis.2002

    • Author(s)
      M.Ito
    • Journal Title

      Dig.Dis.Sci. 47

      Pages: 1080-1085

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Gastric H/K-ATPase liberates two moles of Pi from one mole of phosphoenzyme formed from a high-affinity ATP binding site and one mole of enzyme-bound ATP at the low affinity site during cross-talk between catalytic subunits.2002

    • Author(s)
      K.Abe et al.
    • Journal Title

      Biochemistry 41

      Pages: 2438-2445

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Single replacement of several amino acid side chain exposed inside of the ATP binding pocket induces different extent of affinity change in the high and low affinity ATP binding sites of rat Na/K-ATPase2002

    • Author(s)
      S.Teramachi et al.
    • Journal Title

      J. Biol. Chem. 277, 40

      Pages: 37394-37400

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Role of Anti-Parietal Cell Antibody in Helicobacter pylori-associated Atrophic Gastritis : Evaluation in a Country of High Prevalence of Atrophic Gastritis2002

    • Author(s)
      M.Ito et al.
    • Journal Title

      Scandian. J. Gastroenterol. 162

      Pages: 287-293

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Serological comparison of serum pepsinogen and anti- parietal cell antibody levels between Japanese and German patients2002

    • Author(s)
      M.Ito et al.
    • Journal Title

      Eur. J. Gastroenterol. Hepatol. 14

      Pages: 1-5

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Implication of anti-parietal cell antibody levels gastrointestinal diseases, including gastric carcongenesis.2002

    • Author(s)
      M.Ito et al.
    • Journal Title

      Dig. Dis. Sci. 47

      Pages: 1080-1085

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Oligomeric Nature of Na/K-Transport ATPase2001

    • Author(s)
      K.Taniguchi
    • Journal Title

      The Journal of Biochemistry 129

      Pages: 335-342

    • NAID

      10007853341

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Oligomeric Nature of Na/K-Transport ATPase2001

    • Author(s)
      K.Taniguchi et al.
    • Journal Title

      J. Biochem. 129

      Pages: 333-342

    • NAID

      10007853341

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] K.Abe: "K^+ induced simultaneous liberation of two moles of Pi, one from one mole of EP and the other from EATP, of oligomeric H/K-ATPase from pig stomach"Ann.N.Y.Acad.Sci.. 986. 281-282 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Kaya: "Oligomeric structure of P-type ATPases observed by single molecule detection technique"Ann.N.Y.Acad.Sci.. 986. 278-280 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Abe: "Correlation between the activities and the oligomeric forms of pig gastric H/K-ATPase."Biochemstry. 42(51). 15132-15138 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Imagawa: "The amino acid sequence 442GDASE446 in Na/K-ATPase is an important motif in forming the high and low affinity ATP binding pockets."J.Biol.Chem.. 278・50. 50283-50292 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Abe: "Gastric H/K-ATPase liberates two moles of Pi from one mole of phosphoenzyme fromed from a high-affinity ATP binding site and one mole of enzyme-bound ATP at the low affinity site during cross-talk between catalytic subunits"Biochemstry. 192・41(2). 2438-2445 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Teramachi: "Single replacement of several amino acid side chain exposed inside of the ATP binding pocket induces different extent of affinity change in the high and low affinity ATP binding sites of rat Na/K-ATPase"J. Biol. Chem.. 277・40. 37394-37400 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] N.Fujitani: "Structure determination and Conformational change induced by tyrosine phosphorylation of the N-terminal domain of the α-chain of pig gastric H^+/K^+-ATPase"Biochem. Biopys. Res. Commun.. 3・300(1). 223-229 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Abe: "K^+ induced simultaneous liberation of two moles of Pi, one from one mole of EP and the other from EATP, of oligomeric H/K-ATPase from pig stomach"Ann. N.Y. Acad. Sci.. 986(印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Kaya: "Oligomeric structure of P-type ATPases observed by single molecule detection technique"Ann. N.Y. Acad. Sci.. 986(印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Taniguchi: "The Oligomeric Nature of Na/K-Transport ATPase"Journal of Biochemstry. 129. 335-342 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Abe: "Gastric H/K-ATPase liberates two moles of Pi from one mole of phosphoenzyme fromed from a high-affinity ATP binding site and one mole of enzyme-bound ATP at the low affinity site during cross-talk between catalytic subunits"Biochemstry. (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2025-11-20  

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