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Study on the Structure and Mechanism Involved in Functional regulation of Gastric Proton Pump

Research Project

Project/Area Number 13142202
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionRitsumeikan University (2004-2005)
Toyama Medical and Pharmaceutical University (2001-2003)

Principal Investigator

ASANO Shinji  Ritsumeikan University, College of Information Science and Engineering, Professor, 情報理工学部, 教授 (90167891)

Co-Investigator(Kenkyū-buntansha) MORII Magotoshi  Toyama University, Faculty of Pharmaceutical Sciences, Associate professor, 薬学部, 助教授 (60019130)
TABUCHI Yoshiaki  Toyama University, life Scientific Research Center, Associate professor, 生命科学実験センター, 助教授 (20322109)
Project Period (FY) 2001 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥60,900,000 (Direct Cost: ¥60,900,000)
Fiscal Year 2005: ¥10,600,000 (Direct Cost: ¥10,600,000)
Fiscal Year 2004: ¥11,200,000 (Direct Cost: ¥11,200,000)
Fiscal Year 2003: ¥12,800,000 (Direct Cost: ¥12,800,000)
Fiscal Year 2002: ¥12,800,000 (Direct Cost: ¥12,800,000)
Fiscal Year 2001: ¥13,500,000 (Direct Cost: ¥13,500,000)
Keywordsnanomachine / proton pump / active transport / gastric acid secretion / modeling / 能動輸送 / モデリング / プロテアソーム / ユビキチン / ユビチキン
Research Abstract

The gastric H^+,K^<+->ATPase is the proton pump responsible fbr gastric acid secretion. This pump consists of the catalytic α-and non-catalytic β-subunits. In this research project, we constructed stable cell lines expressing the gastric proton pump, and studied the finctional regulation mechanisms by site-directed mutagenesis in combination with homology modeling method.
(1) We constructed three kinds of stable cell lines; the a-expressing cells, the [3-expressing cells, and the α+β-expressing cells. The α-subunit was retained in the intracellular compartment, and no cell surface expression was observed in the absence of the β-subunit. On the other hand, cell surface expression of the β-subunit was observed even in the absence of the α-subunit. Cell surface expression of the α-and β-subunits was observed in the α+β-expressing cells. The α+β-expressing cells represented rubidium (^<86>Rb) and proton transport activities, which were inhibited by inhibitors of prothn pump.
(2) We studied t … More he binding site of acid pump antagonist (reversible inhibitor of the gastric proton pump), SCH 28080 by site-directed mutagenesis in combination with homology modeling method. When Tyr-801 on the M5 transmembrane segment of the a-subunit was replaced by alanine, the mutant (Y801A) showed 60 times lower sensitivity to SCH 28080 compared with that of wild type. The sensitivity to SCH 28080 was dependent on the bulkiness of this residue, indicating that the side chain of this residue is important for the interaction with this inhibitor. In the 3-D models of the E_2 and E_2P conformations of α-subunit, Tyr-801 is located at a top surface of a docking pocket of the luminal cavity, putative binding site of SCH 28080, surrounded by the TM1, TM4, TMS, TM6 and TM8 segments and the M5/M6, M7/M8 and M9/M10 luminal loops.
(3) We studied the molecular mechanisms of the proton transfer by the gastric proton pump. Homology modeling and molecular dynamics calculation of the α-subunit indicate that protons are transferred from the basic amino acid residue in the cytoplasmic side to the acidic amino acid residue in the cation binding site via the polar amino acid residues. On the other hand, in the estimation of water transport activity in the hog GI gastric vesicles, we found that 1.8 mol of water were transported by 1 mol of ATP hydrolysis, and that this water transport was completely inhibited by an inhibitor ofprotonpump, SCH 28080. From these findings, we concluded that proton transport is carried out by charge movement between the polar amino acid residues in the cytoplamsic half, and that the oxonium ions (H_3O+) formed in the cation binding sites are transported in the luminal half of the membrane. Less

Report

(6 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (55 results)

All 2006 2005 2004 2003 2002 2001 Other

All Journal Article (36 results) Publications (19 results)

  • [Journal Article] Gastric proton pump and membrane dynamics.2006

    • Author(s)
      Asano, S.
    • Journal Title

      Membrane (in press)

    • NAID

      10017581433

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Gastric proton pump and membrane Dynamics.2006

    • Author(s)
      Asano, S., Morii, M.
    • Journal Title

      Membrane (in press)

    • NAID

      10017581433

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 胃酸分泌プロトンポンプの機能と膜ダイナミクス2006

    • Author(s)
      浅野 真司
    • Journal Title

      膜 31(印刷中)

    • NAID

      10017581433

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Novel molecular mechanisms of gastric phospholipids translocation activity in isolated hog gastric vesicles.2005

    • Author(s)
      Morii, M.
    • Journal Title

      Membrane 30

      Pages: 312-317

    • NAID

      10016855118

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Novel molecular mechanisms of gastric phospho- lipids translocation activity in isolated hog gastric vesicles.2005

    • Author(s)
      Morii, M. et al.
    • Journal Title

      Membrane 30

      Pages: 312-317

    • NAID

      10016855118

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 胃ベシクルにおける膜リン脂質転移の新規分子機構2005

    • Author(s)
      森井 孫俊
    • Journal Title

      膜 30(6)

      Pages: 312-317

    • NAID

      10016855118

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 消化管上皮組織とイオンチャネル2005

    • Author(s)
      浅野 真司
    • Journal Title

      別冊医学のあゆみ イオンチャネル最前線update

      Pages: 322-326

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Contribution of oligosaccharides to protection of the H,K-ATPase β-subunit against trypsinolysis.2004

    • Author(s)
      Clothers, J.M.
    • Journal Title

      Electrophoresis 25

      Pages: 2586-2592

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] The cavity structure for docking the K^+-competitive inhibitors in the gastric proton pump.2004

    • Author(s)
      Asano, S.
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 13968-13975

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Molecular and cellular regulation of the gastric proton pump.2004

    • Author(s)
      Asano, S.
    • Journal Title

      Biological Pharmacological Bulletin 27

      Pages: 1-12

    • NAID

      110003608609

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular and cellular regulation of the gastric proton pump.2004

    • Author(s)
      Asano, S. et al.
    • Journal Title

      Biol. Pharm. Bull. 27

      Pages: 1-12

    • NAID

      110003608609

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The cavity structure for docking the K^+- competitive inhibitors in the gastric proton pump.2004

    • Author(s)
      Asano, S. et al.
    • Journal Title

      J. Biol., Chem. 279

      Pages: 13968-13975

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Contribution of oligosaccharides to protection of the H, K-ATPase f3-subunit against trypsinolysis.2004

    • Author(s)
      Clothers, J.M. et al.
    • Journal Title

      Electrophoresis 25

      Pages: 2586-2592

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular and cellular regulation of the gastric proton pump.2004

    • Author(s)
      Asano, S.
    • Journal Title

      Biol.Pharm.Bull. 27

      Pages: 1-12

    • NAID

      110003608609

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Quantity and quality control of gastric proton pump in the endoplasmic reticulum by ubiquitin/proteasome system.2003

    • Author(s)
      Kimura, T.
    • Journal Title

      Biochemistry 42

      Pages: 4771-4779

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] pH of TGN and recycling endosomes of H^+/K^+-ATPase-transfected HEK 293 cells : Implications for pH regulation in the secretory pathway.2003

    • Author(s)
      Machen, T.
    • Journal Title

      American Journal of Physiology 285

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quality control of gastric proton pump in the endoplasmic reticulum by ubiquitin/proteasome system.2003

    • Author(s)
      Asano, S.
    • Journal Title

      Annal. NY Acad. Sci. 986

      Pages: 655-657

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] New gastric epithelial cell lines from mice transgenic for temperature-sensitive simian virus 40 large T antigen show distinct types of cell differentiation.2003

    • Author(s)
      Tabuchi, Y.
    • Journal Title

      Digestion 67

      Pages: 71-81

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] New gastric epithelial cell lines from mice transgenic for temperature-sensitive simian virus 40 large T antigen show distinct types of cell differentiation.2003

    • Author(s)
      Tabuchi, Y. et al.
    • Journal Title

      Digestion 67

      Pages: 71-81

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quality control of gastric proton pump in the endoplasmic reticulum by ubiquitin/proteasome system.2003

    • Author(s)
      Asano, S. et al.
    • Journal Title

      Annal. NY Acad. Sci. 986

      Pages: 655-657

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] pH of TGN and recycling endosomes of H^+/K^+-ATPase-transfected HEK 293 cells : Implications for pH regulation in the secretory pathway.2003

    • Author(s)
      Machen, T. et al.
    • Journal Title

      Am. J. Physiol. 285

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quantity and quality control of gastric proton pump in the endoplasrnic reticulum by ubiquitin/proteasome system.2003

    • Author(s)
      Kimura, T. et al.
    • Journal Title

      Biochemistry 42

      Pages: 4771-4779

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutational study on the roles of disulfide bonds in the β-subunit of gastric H^+,K^+-ATPase.2002

    • Author(s)
      Kimura, T.
    • Journal Title

      Journal of Biological Chemistry 277

      Pages: 20671-20677

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Stable expression of gastric pump activity at the cell surface.2002

    • Author(s)
      Kimura, T.
    • Journal Title

      Journal of Biochemistry 131

      Pages: 923-932

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Expression of ATP1AL1, a non-gastric proton pump in human colorectum.2002

    • Author(s)
      Takahashi, Y.
    • Journal Title

      Japanese Journal of Physiology 52

      Pages: 317-321

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Development and characterization of conditionally immortalized gastric2002

    • Author(s)
      Tabuchi, Y.
    • Journal Title

      Cell Structure and Function 27

      Pages: 71-79

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Development and characterization of conditionally immortalized gastric epithelial cell lines from transgenic rats harboring temperature-sensitive simian virus 40 large T-antigen gene.2002

    • Author(s)
      Tabuchi, Y. et al.
    • Journal Title

      Cell Struct. Funct. 27

      Pages: 71-79

    • NAID

      50000573558

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Expression of A TPIAL1, a non-gastric proton pump in human colorectum.2002

    • Author(s)
      Takahashi, Y. et al.
    • Journal Title

      Jpn. J. Physiol. 52

      Pages: 317-321

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Stable expression of gastric pump activity at the cell surface.2002

    • Author(s)
      Kimura, T. et al.
    • Journal Title

      J. Boichem. 131

      Pages: 923-932

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mutational study on the roles of disulfide bonds in the (3-subunit of gastric H^+,K^+-ATPase.2002

    • Author(s)
      Kimura, T. et al.
    • Journal Title

      J. Biol. Chem. 277

      Pages: 20671-20677

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Alanine-scanning mutagenesis of the sixth transmembrane segment of gastric H^+, K^+-ATPase α-subunit.2001

    • Author(s)
      Asano, S.
    • Journal Title

      Journal of Biological Chemistry 276

      Pages: 31265-31273

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Cibenzoline, an ATP-sensitive K^+ channel blocker, binds to the K^+-binding site from the cytoplasmic side of gastric H^+,K^+-ATPase.2001

    • Author(s)
      Tabuchi, Y.
    • Journal Title

      British Journal of Pharmacology 134

      Pages: 1655-1662

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Is rabbit CLCA1 related to the basolateral Ca^<2+>-dependent Cl channel of gastric parietal cells ?2001

    • Author(s)
      Sakai, H.
    • Journal Title

      Japanese Journal of Physiology 51

      Pages: 121-125

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Is rabbit CLCA1 related to the basolateral Ca^<2+>- dependent Cl^- channel of gastric parietal cells ?2001

    • Author(s)
      Sakai, H. et al.
    • Journal Title

      Jpn. J. Physiol. 51

      Pages: 121-125

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Cibenzoline, an ATP-sensitive K^+ channel blocker, binds to the K^+-binding site from the cytoplasmic side of gastric H^+,K^+-ATPase.2001

    • Author(s)
      Tabuchi, Y. et al.
    • Journal Title

      Br. J. Pharmacol. 134

      Pages: 1655-1662

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Alanine-scanning mutagenesis of the sixth, transmembrane segment of gastric H^+,K^+-ATPase a-subunit.2001

    • Author(s)
      Asano, S. et al.
    • Journal Title

      J. Biol. Chem. 276

      Pages: 31265-31273

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] Kimura, T.: "Quantity and quality control of gastric proton pump in the endoplasmic reticulum by ubiquitin/proteasome system."Biochemistry. 42. 4771-4779 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Machen, T.: "pH of TGN and recycling endosomes of H^+/K^+-ATPase-transfected HEK 293 cells : Implications for pH regulation in the secretory pathway."Am.J.Physiol.. 285. C205-C214 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Asano, S.: "Quality control of gastric proton pump in the endoplasmic reticulum by ubiquitin/proteasome system."Annal.NY Acad.Sci.. 986. 655-657 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tabuchi, Y.: "New gastric epithelial cell lines from mice transgenic for temperature-sensitive simian virus 40 large T antigen show distinct types of cell differentiation."Digestion. 67. 71-81 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Asano, S.: "The cavity structure for docking the K^+-competitive inhibitors in the gastric proton pump."J.Biol.Chem.. 279(In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Asano, S.: "Molecular and cellular regulation of the gastric proton pump."Biol.Pharm.Bull.. 27. 1-12 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kimura, T. et al.: "Mutational study on the roles of disulfide bonds in the β-subunit of gastric H^+, K^+-ATPase"Journal of Biological Chemistry. 277. 20671-20677 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kimura, T. et al.: "Stable expression of gastric proton pump activity at cell surface"Journal of Biochemistry. 131. 923-932 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tabuchi, Y. et al.: "Development and characterization of conditionally immortalized gastric epithelial cell lines from transgenic rats harboring temperature-sensitive simian virus 40 large T-antigen gene"Cell Structure Function. 27. 71-79 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakai, H. et al.: "Molecular and pharmacological properties of inwardly rectifying K^+ channels of human lung cancer cells"Eur. J. Pharmacol.. 435. 125-133 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tabuchi, Y. et al.: "Identification of genes responsive to sodium butyrate in colonic epithelial cells"Biochem. Biophys. Res. Commun.. 293. 1287-1294 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takahashi, Y. et al.: "Expression of ATPIALI, a non-gastric proton pump, in human colorectum"Japanese Journal of Physiology. 52. 317-321 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Asano, S. et al.: "Mutational Analysis of Gastric Proton Pump, α-and β-Subunit. In "Mechanism and Consequences of Proton Transport." By Urushidani, T., Forte, J. G. and Sachs, G."Kluwer Academic Publishers. 59-70 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Asano, S.et al.: "Alanine-scanning mutagenesis of the sixth transmembarne segment of gastric H^+, K^+-ATPase"J.Biol.Chem.. 276. 31265-31273 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tabuchi, Y.et al.: "Cibenzoline, an ATP-sensitive K^+ channel blocker, binds to the K^+-binding site from the cytoplasmic side of gastric H^+, K^+-ATPase"Br.J.Pharmacol.. 134. 1655-1662 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sakai, H.et al.: "Is rabbit CLCAl related to the basolateral Ca^<2+>-dependent Cl^-channel of gastric parietal cells?"Jpn.J.Physiol.. 51. 121-125 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ohta, S.et al.: "Establishment of a Leydig cell line, TTEl, from transgenic mice harboring temperature-senseitive simian virus 40 large T-antigen gene"Arch.Androl.. 48. 43-51 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sakai H.et al.: "Molecular and pharmacological properties of inwardly rectifying K^+ channels of human lung cancer cells"Eur.J.Pharmacol.. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tabuchi, Y.et al.: "Development of a conditionally immortalized testicular Sertoli cell line TTE3 expressing Sertoli cell-specific genes from mice transgenic for temperature-sensitive simian virus 40 large T-antigen gene"J.Urol.. (印刷中). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2018-03-28  

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