• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Rotary coupling mechanism of two nano motors which constitute ATP Synthase

Research Project

Project/Area Number 13308036
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

YOSHIDA Masasuke  Tokyo Institute of Technology, Chem. Res. Lab., Professor, 資源化学研究所, 教授 (90049073)

Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥45,110,000 (Direct Cost: ¥34,700,000、Indirect Cost: ¥10,410,000)
Fiscal Year 2003: ¥13,260,000 (Direct Cost: ¥10,200,000、Indirect Cost: ¥3,060,000)
Fiscal Year 2002: ¥14,040,000 (Direct Cost: ¥10,800,000、Indirect Cost: ¥3,240,000)
Fiscal Year 2001: ¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
KeywordsATP Synthase / Molecular Motor / F_1-ATPase / F_0 channel / ATPase / 回転モーター / ATP / F0F1 / ATP合成 / F1-ATPアーゼ / 回転
Research Abstract

Major results are as follows.
1)A regulatory subunit, ε, binds ATP and it changes its conformation depending on the protonic electrochemical potential difference across the membrane.
2)By introducing Trp residue into the vicinity of the catalytic site on β subunits, we could clarify the origin of apparent negative cooperativity.
3)ATP binding per se drives 80 degree step motion before hydrolysis on the enzyme.
4)By using fluorescent ATP analogue, we could directly observe ATP binding and rotation simultaneously We found that once ATP binds, it remains bound until γ subunit rotates 240 degree.
5)By using magnetic beads and forcing F_1-ATPase to rotate in synthetic direction, we could show continuous ATP synthesis.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (63 results)

All Other

All Publications (63 results)

  • [Publications] Noji H, Yoshida M.: "The rotary machine in the cell ; ATP Synthase."J Biol Chem.. 276. 1665-1668 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tsunoda, S.P., Ageller, R., Yoshida, M., Capaldi, R.A.: "Rotation of the c subunit oligomer in fully functional F_1F_0"Proc Natl Acad Sci USA.. 98. 898-902 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hara, K.Y., Kato-Yamada, Y., Kikuchi, Y., Hisabori, T., Yoshida M.: "The role of the beta-DELSEED motif of F_1-ATPase."J.Biol.Chem.. 276. 23969-23973 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tsunoda, S.P., Rodgers, A.J.W., Ageller R, Wilce, M.C.J., Yoshida, M., Capaldi, R.A.: "Conformational changes of the ε subunit in the bacterial F_1F_0 ATP synthase provide a ratchet action to regulate this rotary motor enzyme."Proc.Natl.Acad.Sci.USA. 98. 6560-6564 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yasuda, R., Noji, H., Yoshida, M., Kinosita, K., Itoh, H.: "Resolution of distinct substeps by submillisecond kinetic analysis of F_1-ATPase"Nature. 410. 898-904 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ariga, T., Masaike, T., Noji, H., Yoshida, M.: "Stepping rotation of F_1-ATPase with one, two, or three altered catalytic sites that bind ATP only slowly;"J Biol Chem,. 277. 24870-24874 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Suzuki, T., Ueno, H., Mitome, N., Suzuki, J., Yoshida, M.: "F_0 of ATP synthase is a rotary proton channel, Obligatory coupling of proton translocation with rotation of c-subunit ring;"J Biol Chem. 277. 13281-13285 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Masaike, T., Muneyuki, E., Noji, H., Kinosita, K., Jr.Yoshida, M.: "F_1-ATPase changes its conformations upon phosphate release"J Biol Chem. 277. 21643-21649 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Imamura, H., Nakano, M., Noji, H., Muneyuki, E., Ohkuma, S., Yoshida, M.: "Evidence for rotation of V_1-ATPase"Proc Natl Acad Sci USA. 100. 2312-2315 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yokoyama, K., Nakano, M., Imamura, H., Yoshida, M., Tamakoshi, M.: "Subunit Arrangement in V-ATPase from Thermus thermophilus"J.Biol.Chem. 278. 24255-24258 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Bald D, Noji H, Yosbida M, Hirono-Hara Y, Hisabori T.: "Redox regulation of the rotation of F_1-ATP synthase."J Biol Chem.. 276. 39505-39507 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yoshida, M., Muneyuki, E., Hisabori, T.: "ATP synthase --- a marvelous rotary engine of the cell."Nature Review Mol.Cell Biol.. 2. 669-677 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hirono-Hara Y, Noji H, Nishiura M, Muneyuki E, Hara KY, Yasuda R, Kinosita K, Jr.Yoshida M.: "Pause and rotation of F_1-ATPase during catalysis."Proc Natl Acad Sci USA.. 98. 13649-13654 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tozawa K, Yagi H, Hisamatsu K, Ozawa K, Yashida M, Akutsu H.: "Functions and ATP-binding responses of the twelve histidine residues in the TF_1-ATPase beta subunit."J Biochem.. 130. 527-533 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mitome N, Ono S, Suzuki T, Shimabukuro K, Muneyuki E, Yashida M.: "The presence of phosphate at a catalytic site suppresses the formation of the MgADP-inhibited form of F_1-ATPase."Eur J Biochem.. 269. 53-60 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato-Yamada, Y., Yoshida, M.: "Isolated epsilon Subunit of Thermophilic F_1-ATPase Binds ATP"J.Biol.Chem. 278. 36013-36016 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Suzuki, T., Murakami, T., Iino, R., Suzuki, J., Ono, S., Shirakihara, Y., Yoshida M.: "F_0F_1-ATPase/synthase is geared to the synthesis mode by conformational rearrangement of subunit in response to proton motive force and ADP/ATP balance"J.Biol.Chem.. 278. 46840-46846 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ono S, Hara KY, Hirao J, Matsui T, Noji H, Yoshida M, Muneyuki E.: "Origin of apparent negative cooperativity of F_1-ATPase."Biochim Biophys Acta. 1607. 35-44 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shimabukuro, K., Yasuda, Y., Muneyuki, E., Hara, K.Y., Kinosita, K.Jr, Yoshida, M.: "Catalysis and rotation of F_1 motor ; cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation."Proc Natl Acad Sci USA. 100. 14731-14736 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Itoh H, Takahashi A, Adachi K, Noji H, Yasuda R, Yashida M, Kinosita K.: "Mechanically driven ATP synthesis by F_1-ATPase."Nature.. 427. 465-468 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishizaka T, Oiwa K, Noji H, Kimura S, Muneyuki E, Yoshida M, Kinosita K Jr.: "Chemomechanical coupling in F_1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation."Nat Struct Mol Biol.. 11. 142-148 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Noji H, Bald D, Yasuda R, Itoh H, Yoshida M, Kinosita K Jr.: "Purine but not pyrimidine nucleotides support rotation of F_1-ATPase."J Biol Chem.. 276. 25480-25486 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 宗行 英朗, 吉田 賢右: "シリーズ・ニューバイオフィジックスII-10 生物物理学とはなにか 第1章7.エネルギー変換:ATP合成酵素(曽我部正博, 郷信広編)"共立出版. 13 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 宗行英朗, 吉田賢右: "新ミトコンドリア学 第一章1・3エネルギー転換系と分子モーター(内海耕慥, 井上正康監修)"共立出版. 8 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Noji H, Yoshida M.: "The rotary machine in the cell ; ATP Synthase."J Biol Chem.. 276. 1665-1668 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tsunoda, S.P., Ageller, R., Yashida, M., Capaldi, R.A.: "Rotation of the c subunit oligomer in fully functional F_1F_0 ATP synthase."Proc Natl Acad Sci U S A.. 98. 898-902 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hara, K.Y., Kato-Yamada, Y., Kikuchi, Y., Hisabori, T., Yoshida M.: "The role of of the beta-DELSEED motif of F_1-ATPase."J. Biol. Chem.. 276. 23969-23973 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tsunoda, S.P., Rodgers, A.J.W., Ageller, R., Wilce, M.C.J., Yoshida, M., Capaldi, R A.: "Large conformational changes of the ε subunit in the bacterial F_1F_0 ATP synthase provide a ratchet action to regulate this rotary motor enzyme."Proc. Natl. Acad. Sci. USA. 98. 6560-6564 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yasuda, R., Noji, H., Yoshida, M., Kinosita, K., Itoh, H.: "Resolution of distinct substeps by submillisecond kinetic 'analysis of F_1-ATPase"Nature. 410. 898-904 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Noji H, Bald.D, Yasuda R, Itoh H, Yoshida M, Kinosita K Jr.: "Purine but not pyrimidine nucleotides support rotation of F_1-ATPase."J Biol Chem.. 276. 25480-25486 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Bald D, Noji H, Yoshida M, Hirono-Hara Y, Hisabori T.: "Redox regulation of the rotation of F_1-ATP synthase."J Biol Chem.. 276. 39505-39507 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yoshida, M., Muneyuki, E., Hisabori, T.: "ATP synthase--a marvelous rotary engine of the cell."Nature Review Mol. Cell Biol.. 2. 669-677 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hirono-Hara Y, Noji H, Nishiura M, Muneyuki E, Hara KY, Yasuda R, Kinosita K Jr, Yoshida M.: "Pause and rotation of F_1-ATPase during catalysis."Proc Natl Acad Sci U S A.. 98. 13649-13654 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tozawa K, Yagi H, Hisamatsu K, Ozawa K, Yoshida M, Akutsu H.: "Functions and ATP -binding responses of the twelve histidine residues in the TF_1-ATPase beta subunit."J Biochem.. 130. 527-533 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mitome N, Ono S, Suzuki T, Shimabukuro K, Muneyuki E, Yoshida M.: "The presence of phosphate at a catalytic site suppresses the formation of the MgADP-inhibited form of F_1-ATPase."Eur J Biochem.. 269. 53-60 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ariga, T., Masaike, T., Noji, H., Yoshida, M.: "Stepping rotation of F_1-ATPase with one, two, or three altered catalytic sites that bind ATP only slowly;"J Biol Chem. 277. 24870-24874 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Suzuki, T., Ueno, H,.Mitome, N., Suzuki, J, Yoshida, M.: "F_0 of ATP synthase is a rotary proton channel. Obligatory coupling of proton translocation with rotation of csubunit ring;"J Biol Chem. 277. 13281-13285 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Imamura, H., Nakano, M., Noji, H., Muneyuki, E,.Ohkuma, S., Yoshida, M., Yokoyama.K.: "Evidence for rotation of V_1-ATPase"Proc Natl Acad Sci U S A. 100. 2312-2315 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yokoyama, K., Nakano, M., Imamura, H., Yoshida, M., Tamakoshi, M.: "Rotation of the Proteolipid Ring in the V-ATPase"J. Biol. Chem.. 278. 24255-24258 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yokoyama, K., Nagata, K., Imamura, H., Ohkuma, H., Yoshida, M., Tamakoshi, M.: "Subunit Arrangement in V-ATPase from Therm us thermophilus"J. Biol. Chem.. 278. 42686-42691 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato-Yamada, Y., Yoshida, M.: "Isolated epsilon Subunit of Thermophilic F_1-ATPase Binds ATP"J. Biol. Chem.. 278. 36013-36016 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Suzuki, T., Murakami, T., Iino, R., Suzuki, J., Ono, S., Shirakihara, Y., Yoshida, M.: "F_0F_1-ATPase/synthase is geared to the synthesis mode by conformational rearrangement of subunit in response to proton motive force and ADP/ATP balance"J. Biol. Chem.. 278. 46840-46846 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ono S, Hara KY, Hirao J, Matsui T, Noji H, Yoshida M, Muneyuki E.: "Origin of apparent negative cooperativity of F_1-ATPase."Biochim Biophys Acta.. 1607. 35-44 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shimabukuro, K., Yasuda, Y., Muneyuki, E,.Hara, K.Y., Kinosita.K.Jr., Yoshida, M.: "Catalysis and rotation of F_1 motor ; cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation."Proc Natl Acad Sci USA. 100. 14731-14736 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Itoh H, Takahashi A, Adachi K, Noji H, Yasuda R, Yoshida M, Kinosita K.: "Mechanically driven ATP synthesis by F_1-ATPase."Nature.. 427(6973). 465-458 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishizaka T, Oiwa K, Noji H, Kimura S, Muneyuki B, Yoshida M, Kinosita K Jr.: "Chemomechanical coupling in F_1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation."Nat Struct Mol Biol.. 11(2). 142-148 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato-Yamada, Y., Yoshida, M.: "Isolated ε Subunit of Thermophilic F_1-ATPase Binds ATP"J.Biol.Chem.. 278. 36013-36016 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Suzuki, T., Murakami, T., Iino, R., Suzuki, J., Ono, S., Shirakihara, Y., Yoshida, M.: "FoF1-ATPase/synthase is geared to the synthesis mode by conformational rearrangement of subunit in response to proton motive force and ADP/ATP balance"J.Biol.Chem.. 278. 46840-46846 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ono S, Hara KY, Hirao J, Matsui T, Noji H, Yoshida M, Muneyuki E.: "Origin of apparent negative cooperativity of F_1-ATPase."Biochim.Biophys.Acta. 1607. 35-44 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shimabukuro, K., Yasuda, Y., Muneyuki, E., Hara, K.Y., Kinosita, K.Jr, Yoshida, M.: "Catalysis and rotation of F1 motor ; cleavage of ATP at. the catalytic site occurs in 1 ms before 40 degree substep rotation"Proc.Natl.Acad.Sci.USA. 100. 14731-14736 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Itoh H, Takahashi A, Adachi K, Noji H, Yasuda R, Yoshida M, Kinosita K: "Mechanically driven ATP synthesis by F_1-ATPase."Nature. 427. 465-468 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nishizaka T, Oiwa K, Noji H, Kimura S, Muneyuki E, Yoshida M, Kinosita K Jr.: "Chemomechanical coupling in F1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation."Nat.Struct.Mol.Biol.. 11. 142-148 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Mitome N, Ono S, Suzuki T, Shimabukuro K, Muneyuki E, Yoshida M.: "The presence of phosphate at a catalytic site suppresses the formation of the MgADP-inhibited form of F1-ATPase"Eur J Biochem.. 269. 53-60 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ariga, T., Masaike, T., Noji, H., Yoshida, M.: "Stepping rotation of F(1)-ATPase with one, two, or three altered catalytic sites that bind ATP only slowly"J Biol Chem,. 277. 24870-24874 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Suzuki, T., Ueno, H., Mitome, N., Suzuki, J., Yoshida, M.: "F(O) of ATP synthase is a rotary proton channel. Obligatory coupling of proton translocation with rotation of c-subunit ring"J Biol Chem,. 277. 13281-13285 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Masaike, T., Muneyuki, E., Noji, H., Kinosita, K., Jr.Yoshida, M.: "F1-ATPase changes its conformations upon phosphate release"J Biol Chem,. 277. 21643-21649 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Noji H, Yoshida M: "The rotary machine in the cell, ATP synthase"j Biol Chem.. 276. 1665-1668 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tsunoda SP, Aggeler R, Yoshida M, Capaldi RA.: "Rotation of the c subunit oligomer in fully functional FiFo ATP synthase"Proc Natl Acad Sci USA. 98(3). 898-902 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hara KY, Kato-Yamada Y, Kikuchi Y, Hisabori T, Yoshida M.: "The role of the betaDELSEED motif of F1-ATPase"j Biol Chem.. 276. 23969-23973 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tsunoda SP, Rodgers AJ, Aggeler R, Wilce MC, Yoshida M, Capaldi RA.: "Large conformational changes of the epsilon subunit in the bacterial F_1F_0 ATPsynthase provide a ratchet action to regulate this rotary motor enzyme"Proc Natl Acad Sci USA. 98. 6560-6564 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yasuda R, Noji H, Yoshida M, Kinosita K Jr, Itoh H.: "Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase"Nature. 410. 898-904 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yoshida M, Muneyuki E, Hisabori T.: "ATP synthase‥ a marvellous rotary engine of the cell"Nat Rev Mol Cell Biol.. 2. 669-677 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Hirono-lara Y, Noji H, Nishiura M, Muneyuki E, Hara KY, Yasuda R, Kinosita K Jr, Yoshida M.: "Pause and rotation of F(1)-ATPase during catalysis"Proc Natl Acad Sci USA. 98. 13649-13654 (2001)

    • Related Report
      2001 Annual Research Report

URL: 

Published: 2001-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi