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Molecular architecture and discontinuous evolution of plastid genomic machinery

Research Project

Project/Area Number 13440234
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionSaitama University

Principal Investigator

SATO Naoki  Saitama University, Faculty of Science, Professor, 理学部, 教授 (40154075)

Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥15,000,000 (Direct Cost: ¥15,000,000)
Fiscal Year 2002: ¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 2001: ¥10,900,000 (Direct Cost: ¥10,900,000)
Keywordschloroplast / plastid / endosymbiosis / nucleoid / RNA polymerase / sulfite reductase / cyanobacterium / 葉緑体核様体 / DNA結合タンパク質 / ゲノム進化
Research Abstract

The following lines of evidence support our hypothesis on the discontinuous evolution of plastid genomic machinery.
1. T7-type RNA polymerase (RPOT) is localized to only mitochondria. In angiosperms, the RPOT gene was duplicated to produce plastid-localyzed isozyme.
2. PEND protein is a DNA-binding protein principally localized to developing plastids. In wounded tissues, this protein is also localized in the nucleus. This protein is only present in angiosperms, and therefore supposed to be newly added transcription factor in angiosperms.
3. Sulfite reductase (SiR) is a major DNA-binding protein in the nucleoids of pea chloroplasts. The cDNA encoding SiR was isolated from pea. In the moss Physcomitrella patens, SiR was also a major component of plastid nucleoids. In red algal plastids and cyanobacteria, SiR was detected in the nucleoids, but was not the major component. This suggests that the major DNA-binding protein of nucleoid has been replaced during the evolution of plastids.
4. Protein phosphorylation is involved in the regulation of transcription in plastid nucleoids.
5. Computer-assisted analysis revealed a large number of plastid proteins that are supposed to originate from cyanobacterial endosymbionts.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (14 results)

All Other

All Publications (14 results)

  • [Publications] Y.Kabeya, K.Hashimoto, N.Sato: "Identification and characterization of two phage-type RNA polymerase cDNAs in the moss Physcomitrella patens"Plant Cell Physiol.. 43. 245-255 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Sekine, T.Hase, N.Sato: "Reversible DNA compaction by sulfite reductase regulates transcriptional activity of chloroplast nucleoids."J.Biol.Chem.. 277. 24399-24404 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Sato: "Comparative analysis of the genomes of cyanobacteria and plants."Genome Informatics. 13. 173-182 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kabeya, K.Hashimoto, N.Sato: "Identification and characterization of two phage-type RNA polymerase cDNAs in the moss Physcomitrella patens"Plan Cell Physiol.. 43. 245-255 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Sekine, T.Hase, N.Sato: "Reversible DNA compaction by sulfite reductase regulates transcriptional activity of chloroplast nucleoids"J. Biol. Chem.. 277. 24399-24404 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Sato: "Comparative analysis of the genomes of cyanobacteria and plants"Genome Informatics. 13. 173-182 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Y.Kabeya, K.Hashimoto, N.Sato: "Identification and characterization of two phage-type RNA polymerase cDNAs in the moss Physcomitrella patens"Plant Cell Physiol.. 43. 245-255 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Sekine, T.Hase, N.Sato: "Reversible DNA compaction by sulfite reductase regulates transcriptional activity of chloroplast nucleoids"J. Biol. Chem.. 277. 24349-24404 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] N.Sato: "Comparative analysis of the genomes of cyanobacteria and plants"Genome Informatics. 13. 173-182 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 佐藤直樹: "生物系研究室における遺伝情報解析のためのUNIX環境の構築.MacOS XとLinuxを用いて"蛋白質核酸酵素. 47. 633-634 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 西村いくこ, 中野明彦, 佐藤直樹監修: "植物細胞工学シリーズ17 「植物オルガネラの分化と多様性」"秀潤社. 232 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Ohmori, M.Ikeuchi, N.Sato, 他: "Characterization of genes encoding multi-domain proteins in the genome of the filamentous nitrogen-fixing cyanobacterium Anabaena sp.Strain PCC 7120"DNA Research. 8. 271-284 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] N.Sato, N.Ohta: "DNA-binding specificity and dimerization of the DNA-binding domain of the PEND protein in the chloroplast envelope membrane"Nucleic Acids.Res.. 29. 2244-2250 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 佐藤直樹: "プラスチド核様体の分子構築・機能の多様性とゲノム装置の不連続進化仮説"生化学. 74. 27-37 (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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