Inhibition of enhancer-promoter interaction involved in the developmental-stage specific gene regulation
| Project/Area Number |
13460149
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| Research Category |
Grant-in-Aid for Scientific Research (B)
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| Allocation Type | Single-year Grants |
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| Section | 一般 |
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| Research Field |
Applied molecular and cellular biology
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| Research Institution | University of Tsukuba |
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Principal Investigator |
TANIMOTO Keiji University of Tsukuba, Institute of applied biochemistry, associate professor, 応用生物化学系, 助教授 (90261776)
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| Co-Investigator(Kenkyū-buntansha) |
ISHIDA Junji University of Tsukuba, Institute of applied biochemistry, assistant professor, 応用生物化学系, 講師 (30323257)
SUGIYAMA Fumihiro University of Tsukuba, Institute of applied biochemistry, associate professor, 基礎医学系, 助教授 (90226481)
AKIYOSHI Fukamizu University of Tsukuba, Institute of applied biochemistry, professor, 応用生物化学系, 教授 (60199172)
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| Project Period (FY) |
2001 – 2003
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| Project Status |
Completed (Fiscal Year 2003)
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| Budget Amount *help |
¥11,200,000 (Direct Cost: ¥11,200,000)
Fiscal Year 2003: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2002: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2001: ¥5,200,000 (Direct Cost: ¥5,200,000)
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| Keywords | globin / insulator / YAC / transgenic mouse |
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| Research Abstract |
The human (3-globin locus contains five developmentally regulated (3-type globin genes. All five genes depend on the locus control region (LCR), located at the 5' end of the locus, for abundant globin gene transcription. The LCR is composed of five DNase I hypersensitive sites (HSs), at least a subset of which appear to cooperate to form a holocomplex in activating genes within the locus. We previously tested the requirement for proper LCR polarity by inverting it in human β-globin YAC transgenic mice (TgM) and observed reduced expression of all the β-type globin genes, regardless of developmental stage. This phenotype clearly demonstrated an orientation-dependent activity of the LCR, although the mechanistic basis for the observed activity was obscure. In this research project, we obtained genetic evidence demonstrating that human HSS includes enhancer-blocking (insulator) activity that was dependent on the presence of an intact CTCF-binding motif within LCR HSS. Curiously, this CTCF-dependent activity appeared to be both gene and developmental-stage specific. These observations demonstrated that the phenotype observed in the LCR-inverted locus was, in part, attributable to placing the HSS insulator between the LCR HS "enhancers (HS1-4)" and the promoter of the β-globin gene, but further that the HS5 sequence also beared a primitive erythroid silencing activity that is CTCF-independent.
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Report
(4 results)
Research Products
(5 results)
