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Analysis of susceptibility gene to Crohn's disease in the HLA region

Research Project

Project/Area Number 13470110
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Gastroenterology
Research InstitutionTohoku University

Principal Investigator

KINOUCHI Yoshitaka  Tohoku University, Graduate School of Medicine, Associate Professor, 大学院・医学系研究科, 助教授 (20250780)

Co-Investigator(Kenkyū-buntansha) TAKAHASHI Seiichi  Tohoku University, Hospital, Research Associate, 医学部附属病院, 助手 (40312574)
UENO Yoshiyuki  Tohoku University, Hospital, Lecture, 医学部附属病院, 講師 (70282126)
SHIMOSEGAWA Tooru  Tohoku University, Graduate School of Medicine, Professor, 大学院・医学系研究科, 教授 (90226275)
Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥14,600,000 (Direct Cost: ¥14,600,000)
Fiscal Year 2003: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2002: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 2001: ¥11,100,000 (Direct Cost: ¥11,100,000)
KeywordsCrohn's disease / Susceptibility gene / polymorphism / association study / HLA / TNF-α
Research Abstract

Though etiology of Crohn's disease and ulcerative colitis still remains unclear, a lot of studies have shown that genetic background is important in susceptibility to Crohn's disease and ulcerative colitis. To identify the susceptibility genes to Crohn's disease and ulcerative colitis, we have performed association mapping in the chromosome 6p. In Crohn's disease, we have determined two independent association peaks, one is near the HLA-DQB1 gene, the other is near the TNF gene. Concerning ulcerative colitis, association mapping has demonstrated that important determinants of disease susceptibility to UC may exist in HLA, especially between the centromeric region of class I and the telomeric region of class III, under the strong LD with HLA-B^*52. According to our genetic analysis of the HLA region, the most attractive candidate gene was the TNF gene. I have already reported that SNPs in the 5'-flanking region are associated Crohn's disease. To determine functional significance, promoter analysis of the 5'-flanking region in the TNF gene was performed. The results of the promoter assay were not reproducible. The activity was revealed to depend on cells used in the assay.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] Sugimura M, Kinouchi Y, et al.: "CARD15/NOD2 mutational analysis in Japanese patients with Crohn's disease"Clnical Genetics. 63. 160-162 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kinouchi Y, et al.: "HLA-B genotype in Japanese patients with Crohn's disease."Dis Colon & Rectum. 46. S10-S14 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sugimura M, Kinouchi Y, et al.: "CARD15/NOD2 mutational analysis in Japanese patients with Crohn's disease"Clinical Genetics. 63. 160-162 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kinouchi Y, et al.: "HLA-B genotype in Japanese patients with Crohn's disease."Dis Colon & Rectum. 46. S10-S14 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sugimura M, Kinouchi Y, et al.: "CARD15/NOD2 mutational analysis in Japanese patients with Crohn's disease"Clinical Genetics. 63. 160-162 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kinouchi Y, et al.: "HLA-B genotype in Japanese patients with Crohn's disease"Dis Colon & Rectum. 46. S10-S14 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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