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COMPREHENSIVE DNA DIAGNOSTIC SYSTEM FOR SINGILE GENE DISORDERS

Research Project

Project/Area Number 13470155
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionTOHOKU UNIVERSITY

Principal Investigator

MATSUBARA Yoichi  TOHOKU UNIV., MEDICAL GENETICS, PROFSSOOR, 大学院・医学系研究科, 教授 (00209602)

Co-Investigator(Kenkyū-buntansha) AOKI Yoko  TOHOKU UNIV., MEDICAL GENETICS, RESEARCH PROFESSOR, 大学院・医学系研究科, 助手 (80332500)
SUZUKI Yoichi  TOHOKU UNIV., MEDICAL GENETICS, LECTURER, 大学院・医学系研究科, 講師 (80216457)
KURE Shigeo  TOHOKU UNIV., MEDICAL GENETICS, ASSOCIATE PROFESSOR, 大学院・医学系研究科, 助教授 (10205221)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥16,400,000 (Direct Cost: ¥16,400,000)
Fiscal Year 2002: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2001: ¥12,100,000 (Direct Cost: ¥12,100,000)
Keywordssingle gene disorders / DNA diagnosis / phenylkeonuria / glycogen storage disease / hyperglycinemia / pharmaconenetics
Research Abstract

The purpose of the current study was to establish comprehensive DNA diagnostic system for various single gene disorders. To this end, we used a novel DNA test strip method to detect previously idertified pathogenic mutations. We also used denaturing high-performance liquid chromatography (DHPLC) to scan for unknown mutations and an automatic capillary DNA sequencer to confirm mutations. The DNA test strip method, originally developed in our laboratory, utilizes competitive allele-specific short oligonucleotide hybridization coupled with immunochromatographic strip. It was used for the detection of known mutations in glycogen storage disease type Ia and Ib, non-ketotic hyperglycinemia, aldehyde dehydrogenase 2 deficiency, Tay-Sachs disease, Gaucher disease, cyctic fibrosis, familial breast cancer due to BRCA1 or BRCA2 mutations, Factor V Leiden mutation, CYP2C19 and mitochondrial A1555G mutation. We also evaluated the feasibility of DHPLC followed by sequencing analysis from clinical diagnostic point of view. The combination of the three methods would facilitate DNA diagnosis by efficiently identifying mutations.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (38 results)

All Other

All Publications (38 results)

  • [Publications] Matsubara T, et al.: "Detection of Single Nucleotide Substitution by Competitive Allele-Specific Short Oligonucleotide Hybridization (CASSOH) with Immunochromatographic Strip"Human Mutation. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kondoh T, et al.: "Noonan syndrome with leukaemoid reaction and overproduction of catecholamines : a case report"European Journal of Pediatrics. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kudo T, et al.: "Transgenic expression of a dominant-negative connexin26 causes degeneration of the organ of Corti and non-syndromic deafness"Human Molecular Genetics. 12. 995-1004 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kure S, et al.: "Heterozygous GLDC gene mutations in transient neonatal hyperglycinemia"Annals of Neurology. 52. 643-646 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Namekawa M, et al.: "Identification of the GFAP gene mutation in hereditary adult-onset Alexander disease (HAAD)"Annals of Neurology. 52. 779-785 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kanno K, et al.: "Lack of evidence for a significant association between nonsyndromic cleft lip with or without cleft palate and the retinoic acid receptor alpha gene in the Japanese population"Journal of Human Genetics. 47. 269-274 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kudo T, et al.: "GJB2 (connexin 26) mutations and childhood deafness in Thailand"Otol. Neurotol. 22. 858-861 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakata Y, et al.: "Structure and expression of the glycine cleavage system in rat central nervous system"Mol. Brain Res.. 94. 119-130 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yang x, et al.: "Structure of human holocarboxylase synthetase gene and mutational spectrum of holocarboxylase synthetase deficiency"Human Genetics. 109. 526-534 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Aoki Y, et al.: "A novel mutation in glial fibrillary acidic protein (GFAP) gene in a patient with Alexander disease"Neurosci Lett. 312. 71-74 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kure S, et al.: "Chromosomal localization, structure, single-nucleotide polymorphisms, and expression of the human H-protein gene of the glycine cleavage system (GCSH), a candidate gene for nonketotic hyperglycinemia"Journal of Human Genetics. 46. 378-384 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 松原洋一ほか: "内科学 第8版"朝倉書店. 2297 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kure S, Matsubara Y, et al.: "Chromosomal localization, structure, single-nucleotide polymorphisms, and expression of the human H-protein gene of the glycine cleavage system (GCSH), a candidate gene far nonketotic hyperglycinemia"J Hum Genet. 46. 378-384 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Aoki Y, Matsubara Y, et al.: "A novel mutation in glial fibrillary acidic protein (GFAP) gene in a patient with Alexander disease"Neurosci Lett. 312. 71-74 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yang X, Matsubara Y, et al.: "Strncture of human holocarboxyiase syntheiase gene and mutationai spectrum of holocarboxylase synthetase deficiency"Hum Genet. 109. 526-534 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakata Y, Matsubara Y, et al.: "Structure and expression of the glycine cleavage system in rat central nervous system"Mol Brain Res. 94. 119-130 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kudo T, Matsubara Y, et al.: "GJB2 (connexin 26) mutations and childhood deafness in Thailand"Otol Neurotol. 22. 858-861 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kanno K, Matsubara Y, et al.: "Lack of evidence for a significant association between nonsyndromic cleft lip with or without cleft palate and the retinoic acid receptor alpha gene in the Japanese population"J Hum Genet. 47. 269-274 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Namekawa M, Matsubara Y, et al.: "Identification of the GFAP gene mutation in hereditary adult-onset Alexander disease (HAAD)"Ann Neurol. 52. 779-785 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kure S, Matsubara Y, et al.: "Heterozygous GLDC gene mutations in transient neonatal hyperglycinemia"Ann Neurol. 52. 643-646 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kudo T, Matsubara Y, et al.: "Transgenic expression of a dominant-negative connexin26 causes degeneration of the organ of Corti and non-syndromic deafness"Hum Mol Genet. 12. 995-1004 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kondoh T, Matsubara Y, et al.: "Noonan syndrome with leukaemoid reaction and overproduction of catecholamines: a case report"Eur J Pediar. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Matsubara Y, Kure S: "Detection of Single Nucleotide Substitution by Competitive Allele-Specific Short Oligonucleotide Hybridization (CASSOH) with Immunochromatographic Strip"Hum Mutat. in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Matsubara Y, et al.: "Internal Medicine learning-8"Asakara. 2297 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Matsubara T, et al.: "Detection of Single Nucleotide Substitution by Competitive Allele-Specific Short Oligonucleotide Hybridization (CASSOH) with Immunochromatographic Strip"Human Mutation. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kudo T, et al.: "Transgenic expression of a dominant-negative connexin26 causes degeneration of the organ of Corti and non-syndromic deafness"Human Molecular Genetics. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kure S, et al.: "Heterozygous GLDC gene mutations in transient neonatal hyperglycinemia"Annals of Neurology. 52. 643-646 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Namekawa M, et al.: "Identification of the GFAP gene mutation in hereditary adult-onset Alexander disease (HAAD)"Annals of Neurology. 52. 779-785 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kanno K, et al.: "Lack of evidence for a significant association between nonsyndromic cleft lip with or without cleft palate and the retinoic acid receptor alpha gene in the Japanese population"Journal of Human Genetics. 47. 269-274 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 呉 繁夫, 松原洋一: "ゲノムと疾患"medicina. 39. 387-389 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 松原洋一ほか: "内科学 第8版"朝倉書店. 2297 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kure S, et al.: "Chromosomal localization, structure, single-nucleotide polymorphisms, and expression of the human H-protein gene of the glycine cleavage system (GCSH), a candidate gene for nonketotic hyperglycinemia"J. Hum. Genet. 46. 378-384 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Aoki Y, et al.: "A novel mutation in glial fibrillary acidic protein (GFAP) gene in a patient with Alexander disease"Neurosis. Lett.. 312. 71-74 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yang X, et al.: "Structure of human holocarboxylase synthetase gene and mutational spectrum of holocarboxylase synthatase deficiency"Hum. Genet.. 109. 526-534 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sakata Y, et al.: "Structure and expression of the glycine cleavage system in rat central nervous system"Mol Brain Res.. 94. 119-130 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kudo T, et al.: "GJB2(connexin 26) mutations and childhood deafness in Thailand"Otol. Neurotol.. 22. 858-861 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 菅野貴世史ほか: "唇裂・口蓋裂におけるMTHFR遺伝子C677T変異の関与は否定的である"日本形成外科学会会誌. 21. 690-694 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 松原洋一ほか: "「先天異常症候群辞典」"日本臨床. 877 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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