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Molecular mechanism of mammalian mRNA surveillance

Research Project

Project/Area Number 13480211
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionYokohama City University

Principal Investigator

OHNO Shigeo  Yokohama City University School of Medicine Department of Molecular Biology, Professor, 医学部, 教授 (10142027)

Co-Investigator(Kenkyū-buntansha) AKIMOTO Kazunori  Yokohama City University School of Medicine Department of Molecular Biology, Assistant Professor, 医学部, 助手 (70285104)
HIRAI Syu-ichi  Yokohama City University School of Medicine Department of Molecular Biology, Associate Professor, 医学部, 助教授 (80228759)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥15,200,000 (Direct Cost: ¥15,200,000)
Fiscal Year 2002: ¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 2001: ¥8,600,000 (Direct Cost: ¥8,600,000)
Keywordsnonsense mutation / mRNA degradation / mRNA surveillance / NMD / protein kinas / PIK remitted protein kinas / RNA helices / ATPase / mRNA分離 / リン脂質キナーゼ / ATPアーゼ
Research Abstract

Nonsense-mediated mRNA decay (NMD) is a conserved surveillance mechanism that eliminates imperfect mRNAs containing premature translation termination codons (PTCs) and code for nonfunctional or potentially harmful polypeptides. We show that a novel phosphatidylinositol 3-kinase-related protein kinas, hSMG-1, is a human orthologue of a product of Caenorhabditis elegance smg-1, one of seven smg genes involved in NMD. hSMG-1 phosphorylates hUPF1/SMG-2 in vivo and in vitro at specific serine residues in SQ motifs. hSMG-1 can associate with hUPF1/SMG-2 and other components of the surveillance complex. In particular, over expression of the PTC-dependent b-goblin mRNA degradation, whereas that of wild-type hSMG-1 enhances it. We also show that inhibitors of hSMG-1 induce the accumulation of truncated p53 proteins in human cancer cell lines with p53 PTC mutation. Taken together, we conclude that hSMG-1 plays a critical role in *D through the direct phosphorylation of hUPF1/SMG-2 in the evolutionally conserved mRNA surveillance complex. We also show that human homologues of C. elegance SMG-5 and SMG-7 form a stable complex that selectively associates with phosphorylated hUPF1 (P-hUPF1). The complex also associates with PP2A, resulting in its dephosphorylation. Overexpression of hSMG-5 mutants that remain able to interact with P-hUPF1, but cannot induce its dephosphorylation impair NMD, indicating that dephosphorylation of P-hUPF1 is required for NMD. We also show that P-hUPF1 forms distinct complexes containing different is forms of hUPF3A. We propose that sequential phosporylation and dephosphorylation of hUPF1 by hSMG-1 and PP2A, respectively, contribute to the assembly cycles of the mRNA surveillance complex.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] Ohnishi, T., Ohno, S., et al.: "Phosphorylated hUPF1 selectively associates with hSMG5 and hSMG7 for PP2A-mediated dephosphorylation required for mammalian Nonsense-Mediated mRNA Decay"(投稿中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamashita, A., Ohno, S., et al.: "Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay"Genes & Development. 15. 2215-2228 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ohnishi, T., Yamashita, A., Kashima, I., Schell, T., Anders, K. R. Grimson, A., Hachiya, T., Matthias W. Hentze, M. W., Anderson, P., and Ohno, S.: "Phosphorylated hUPF1 selectively associates with hSMG5 and hSMG7 for PP2A-mediated dephosphorylation required for mammalian Nonsense-Mediated mRNA Decay."submitted for publication.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yamashita, A., Ohnishi, T., Kashima, I., Taya, Y. and Ohno, S.: "Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinas, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay."Genes & Development 15. 2215-2228 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Baba, M., Hirai, S-f., Yamada-Okabe, H., Hamada, K., Tabuchi, H., Kobayashi, K., Kondo, K., Yoshida, M., Yamashita, A., Kishida, T., Nakaigawa, N., Nagashima, Y., Kubota, Y., Yao, M., Ohno, S.: "Loss of von Hippel-Lindau protein causes cell density-dependent deregulation of CyclinD1 expression through Hypoxia-inducible factor"Oncogene. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Kitamura, K., Mizuno, K., Etoh, A., Akita, Y., Miyamoto, A., Nakayama, K-I, Ohno, S.: "The second phase activation of protein kinase Cd at late G1 is required for DNA synthesis in serum-induced cell cycleprogression"Genes to Cells. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Suzuki, A., Akimoto, K., Ohno, S.: "Protein Kinase Cl/i (PKCl/i) : A PKC isotype essential for the development of multicellular organisms"Japanese Biochemical Society. 133. 9-16 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Nagai-Tamai, Y., Mizuno, K., Hirose, T., Suzuki, A., Ohno, S: "Regulated protein-protein interaction between aPKC and PAR-3 plays an essential role in the polarization of epithelial cells"Genes to Cells. 7. 1161-1171 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yamaji, S., Suzuki, A., Kanamori, H., Mishima, W., Takabayashi, M., Fujimaki, K., Tomita, N., Fujisawa, S., Ohno, S., Ishigatsubo, Y: "ILK-affixin complex is involved in integrin-cytoskeleton linkage in platelets"Biochem. Biophys. Res. Commun.. 297. 1324-1331 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ohno, S., Nishizuka, Y.: "Protein kinase C isotypes and their specific functions : prologue"J. Biochem. (Tokyo). 132. 509-511 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Suzuki, A., Ishiyama, C., Hashiba, K., Shimizu, M., Ebnet, K., Takai, Y., Ohno, S: "aPKC kinase activity is required for the asymmetric differentiation of the premature junctional complex during epithelial cell polarization"J. Cell Science. 115. 3565-3573 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Manabe, N., Hirai, S-I., Imai, F., Nakanishi, H., Takai, Y., Ohno, S: "Association of ASIP/mPAR-3 with adherens junctions of mouse neuroepithelial cells"Developmental Dynamics. 225. 61-69 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hirai, S-I., Kawaguchi, A., Hirasawa, R., Baba, M., Ohnishi, T., Ohno, S.: "UK) regulates the radial migration of immature neurons in"Development. 129. 4483-4495 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tsuru, M., Katagiri, H., Asano, T., Yamada, T., Ohno, S., Ogihara, T., Oka Y.: "Role of PKC isoforms in glucose transport in 3T3-L1 adipocytes : insignificance of atypical PKC"Am J Physiol Endocrinol Metab. 283. E338-E345 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Mishima, A., Suzuki, A., Enaka, M., Hirose, T., Mizuno, K., Ohnishi, T., Mohri, H., Ishigatsubo, Y., Ohno, S.: "Over-expression of PAR-3 suppresses contact-mediated inhibition of cell migration in MDCK cells"Genes to Cells. 7. 581-596 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hirose, T., Izumi, Y., Nagashima, Y., Tamai-Nagai, Y., Kurihara, H., Sakai, T., Suzuki, Y., Yamanaka, T., Suzuki, A., Mizuno, K., Ohno, S.: "Involvement of ASIP/PAR-3 in the promotion of epithelial tight junction formation"J. Cell Science. 115. 2485-2495 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Miyamoto, A., Nakayama, K., Imaki, H., Hirose, S., Jiang, Y., Abe, M., Tsukiyama, T., Nagahama, H., Ohno, S., Hatakeyama, S., Nakayama, K-I.: "Increased proliferation of B cells and auto-immunity in mice lacking protein kinase Cdelta"Nature. 416. 865-869 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hiwasa, T., Nakata, M., Nakata, M., Ohno, S., Maki, M., Suzuki, K., Takiguchi, M.: "Regulation of transformed state by Calpastatin via PKCepsilon in NIH3T3 mouse fibroblasts"Biochem. Biophys. Res. Commun.. 290. 510-517 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 山下暁朗, 大西哲生, 大野茂男: "mRNAサーベイランス"蛋白質・核酸・酵素版. 47(2). 101-112 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Mishima, A., Suzuki, A., Enaka, M., Hirose, T, Mizuno, K., Ohnishi, T, Mohri, H., Ishigatsubo, Y., Ohno, S.: "Ectopic expression of PAR-3 disturbs the equilibrium between the polarized and non-polarized states of mammalian epithelial cells"Genes to Cells. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Hirose, T, Izumi, Y., Nagashima, Y., Tamai-Nagai, Y., Kurihara, H., Sakai, T., Suzuki, Y., Yamanaka, T., Suzuki, A., Mizuno, K., Ohno, S.: "Involvement of ASIP/PAR-3 in the Promotion of Epithelial Tight Junction Formation"J. Cell Science. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Miyamoto, A., Nakayama, K., Imaki, H., Hirose, S., Jiang, Y., Abe, M., Tsukiyama, T., Nagahama, H., Ohno, S., Hatakeyama, S., Nakayama, K-I.: "Increased proliferation of B cells and autoimmune disease in protein kinase C-delta-deficient mice"Nature. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] Hiwasa, T., Nakata, M., Nakata, M., Ohno, S., Maki M., Suzuki, K., Takiguchi, M.: "Regulation of Transformed State by Calpastatin via PKCepsilon in NIH3T3 Mouse Fibroblasts"Biochem. Biophys. Res. Commun.. 290. 510-517 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Harbers, M., Nomura, T., Ohno, S., Ishii, S.: "Intracellular localization of the ret finger protein depends on a functional nuclear export signal and protein kinase C activation"J. Biol Chem.. 276. 48596-48607 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Okuda, H., Saitoh, K., Hirai, Si., S., Iwai, K., Takak Y., Baba, M., Minato, N., Ohno, S., Shuin, T.: "The Von Hippel-Lindau (VHL) tumor suppressor protein mediates ubiquitination of activated atypical protein kinase C"J Biol Chem.. 276. 43611-43617 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ohno, S.: "Intercellularjunctions and cellular polarity : the PAR-aPKC complex, a conserved core cassette playing fundamental roles in cell polarity"Curr. Opin. Cell Biol.. 13. 641-648 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Matstuda, S., Yasukawa, T., Homma, Y., Ito, Y., Niikura, T., Hiraki, T., Hirai, S., Ohno, S., Kita, Y., Kawasumi, M., Kouyama, K., Yamamoto, T., Kyriakis, J.M., Nishimoto, I.: "c-Jun n-terminal kinase (jnk)-interacting protein-1b/islet-brain-1 scaffolds alzheimer's amyloid precursorprotein with juk"J. Neurosci.. 21. 6597-6607 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Zhao, X., Murata, T., Ohno, S., Day, N., Song, J., Nomura, N., Nakahara, T., Yokoyama, K.K.: "Protein kinase Ca plays a critical role in mannosylerythritol lipid-induced differentiation of melanoma B16 cells"J. Biol. Chem.. 276. 39903-39910 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yamashita, A., Ohnishi, T., Kashima, I., Taya, Y., Ohno, S.: "Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay"Genes Dev.. 15. 2215-2228 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ebnet, K., Suzuki, A., Horikoshi, Y., Hirose, T., Meyer, Zu., Brickwedde, M.K., Ohno, S., Vestweber, D.: "The cell polarity protein ASIP/PAR-3 directly associates with junctional adhesion molecule (JAM)"EMBO. J.. 20. 3738-3748 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yamanaka, T., Horikoshi, Y., Suzuki, A., Sugiyama, Y., Kitamura, K., Maniwa, R., Nagai, Y., Yamashita, A., Hirose, T., Ishikawa, H., Ohno, S.: "PAR-6 regulates aPKC activity in a novel way and mediates cell-cell contact-induced formation of the epithelial junctional complex"Genes Cells. 6. 721-731 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yamaji, S., Suzuki, A., Sugiyama, Y., Koide, Y., Yoshida, M., Kanamori.H., Mohri, H., Ohno, S., Ishigatsubo, Y.: "Anovel integrin-linked kinase-binding protein, affixin, is involved in the early stage of cell-substrate interaction"J. Cell. Biol.. 153. 1251-1264 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takaki, Y., Hirai, S., Manabe, N., Izumi, Y., Hirose, T., Nakaya, M., Suzuki, A., Mizuno, K., Akimoto, K., Tsukita, S., Shuin, T., Ohno, S.: "Dynamic changes in protein components of the tight junction during liver regeneration"Cell Tissue Res.. 305. 399-409 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Baba, M., Hirai, S., Kawakami, S., Kishida, T., Sakai, N., Kaneko, S., Yao, M., Shuin, T., Kubota, Y., Hosaka, M., Ohno, S.: "Tumor suppressor protein VHL is induced at high cell density and mediates contact inhibition of cell growth"Oncogene. 20. 2727-2736 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Noda, Y., Takeya, R., Ohno, S., Naito, S., Ito, T., Sumimoto, H.: "Human homologues of the Caenorhabditis elegans cell polarity protein PAR6 as an adaptor that links the small GTPases Rac and Cdc42 to atypical protein kinase C"Genes Cells. 6. 107-119 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Suzuki, A., Yamanaka, T., Hirose, T., Manabe, N., Mizuno, K., Shimizu, M., Akimoto, K., Izumi, Y., Ohnishi, T., Ohno, S.: "Atypical protein kinase C is involved in the evolutionarily conserved par protein complex and plays a critical role in establishing epithelia-specific junctional structures"J. Cell Biol.. 152. 1183-1196 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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