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X-ray diffraction analysis of structural charges of regulatory proteins and tins in muscle contraction.

Research Project

Project/Area Number 13480220
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionOsaka University

Principal Investigator

WAKABAYASHI Katsuzo  Osaka University, Graduate School of Engineering Science, Professor, 大学院・基礎工学研究科, 教授 (00029521)

Co-Investigator(Kenkyū-buntansha) UENO Yutaka  National Institute of Advanced Industrial Science and Technology, Principal Investigator, 脳神経情報部門, 主任研究員 (60356558)
Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥15,100,000 (Direct Cost: ¥15,100,000)
Fiscal Year 2003: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2002: ¥4,200,000 (Direct Cost: ¥4,200,000)
Fiscal Year 2001: ¥9,700,000 (Direct Cost: ¥9,700,000)
Keywordsmuscle contraction / regulatory mechanism / troponin / thin actin filament / X-ray diffractions / synchrotron radiation / time-resolved X-ray diffraction / tropomyoin / 時分割X線回折 / 骨格筋の収縮 / 筋収縮制御
Research Abstract

Structural changes of the regulatory proteins (troponin and tropomyosin) and the thin actin filaments occurring in the muscle contraction process have been measured by using an intense synchrotron X-ray diffraction, and their data were analyzed. The obtained results are as follows.
(1)Time-resolved X-ray diffraction with a CCD-based 2D detector in the process of isometric force development of muscle at the full overlap length of thin and thick filaments showed that the first troponin-associated meridional reflection (TN1) increased its intensity at the onset of stimulation to ca. 140% and then decreased it together with the development of force, reaching the level below the resting value. The TN2 intensity decreased in parallel with the development of tension but the TN3 intensity increased and run ahead the tension. On activation of muscle at the non-overlap length, the intensity of TN1 increased by ca. 40% on the onset of stimulation but stayed at the ca. 140% level during the plateau … More phase of force. However, their radial reflection width increased with the development of force. After the correction of the radial width, the TN1 intensity decayed and stayed almost at the resting level after an initial increase. The modeling analysis of the intensity changes of TN1-TN4 suggested that on activation the elongated domain moved relative to the globular domain of a TN molecule to increase the overlap between the two domains and during the plateau level of force development the overlap between the two domains decreased toward the resting state.
The results indicates that the structural changes of the TN molecules which are related to the regulatory mechanism in muscle contraction are occurring in the two processes, namely on activation and during force generation.
(2)With the use of a low emittance synchrotron beam, the close relationship between the extensibility and twisting changes of the thin actin filaments was clarified by investigating the first actin-based layer line in the 2D X-ray diffraction patterns from a contracting muscle by the application of stretch. The relative spacing change of the first layer line was ca. 0.90% during stretch applied to contracting muscle and was -1.38% on activation of the overstretched muscle, confirming that the extensibility is closely related with the nature of the twisting of the left-and right-handed genetic helices. The helical symmetry of the actin filament altered from an 80 units/37 turns symmetry in the resting state through a 106 units/49 turns on activation to a 54 units/25 turns symmetry in the force generating state. These results clearly indicate that the thin actin filament itself include the on-off-states, operating as the Ca2+ switch and during contraction the extensibility of the actin filaments is directly related to the extention of the elastic element in muscle.
(3)The 2D X-ray diffraction patterns with a high-spatial resolution were taken during contraction, and the intensities of the actin-based layer lines were measured upto thel.37 nm reflection corresponding to the third order actin meridional reflection. Using the higher-angle intensity data of the layer lines above the 7.1 nm, the modeling analysis of the actin filament including the core domain of troponin molecules was performed by starting from the Holmes' atomic filament model (1990). In the modeling the actin monomer in the filament was subdivided into 16 segments without destroying the secondary structures and they were moved as a rigid body. The disposition and arrangement of the troponin core domains on the actin filament were searched to obtain the minimum value of the R-factor. The best-fit resting model of the actin filament was determined with some modification of the Holmes' model. The troponin core domain bound over the subdomains 1 and 2 of actin in the filament. The results indicate that small movements of each four subdomains in the actin monomer as well as the disposition of the troponin core domain portion take place during contraction. The largest movement was the subdomain 2; it moved toward the filament axis by ca. 0.5 nm. The TNC part moved toward the outside of the actin filament. Less

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (55 results)

All Other

All Publications (55 results)

  • [Publications] Y.Sugimoto: "Time-resolved X-ray diffraction studies on skeletal muscle regulation : Intensity changes of the troponin-associated meridional reflections during activation"J.Muscle Res.Cell Motil.. 22. 205 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa: "An alteration of the helical twist of the actin filaments accompanied by a force generation as revealed by the spacing change of the actin-based first layer-line component"J.Muscle Res.Cell Motil.. 22. 206 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto: "Time-resolved X-ray diffraction studies on skeletal muscle regulation : Intensity changes of the troponin-associated meridonal reflections"Photon Factory Activity Rep.. 18B. 231 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto: "An X-ray solution scattering study on the conformation of pPDM-crosslinked myosin subfrgment-1 trapping MgADP"Photon Factory Activity Rep.. 18B. 233 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] J.Higo: "Collective motions of myosin head derived from backbone molecular dynamics and combination with X-ray solution scattering data"J.Conput.Chem.. 22. 1983-1994 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa: "Alteration if the helical twist associated with the shortening of the thin actin filaments upon activation of skeletal muscles"Photon Factory Activity Rep.. 19B. 204 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Wakabayashi: "Molecular mechanism of muscle contraction studied by X-ray diffraction using PF synchrotron radiation"KEK Proceedings. 2001-24. 143-161 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa: "Alteration of the helical twist associated with the shortening of the thin actin filaments upon activation of skeletal muscle"J.Muscle Res.Cell Motil.. 23. 176 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto: "Time resolved X-ray diffraction studies on skeletal muscle regulation : Intensity changes of the troponin-associated meridional reflections"Photon Factory Activity Rep.. 20B. 237 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Yamada: "Rigor force producing cross-bridges in skeletal muscle fibers activated by a sub-stoichiomeric amount of ATP"Biophys.J.. 85. 1741-1753 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Oshima: "Modeling analysis of myoshin-based meridional X-ray reflections from frog skeletal muscle in relaxed and contracting states"Adv.Exp.Med.Biol.. 538. 243-249 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Wakabayashi: "Use of synchrotron radiation, In encyclopedia of Life Sciences"Macmillian Nature Publishing Group. 1-11 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa: "Actin as the generator element of force in muscle contraction, in Highlight of PF Activity"KEK Prog.Rep.. 2001-1. 41-42 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto: "Energy transducing conformation changes of myosin motor proteins, in Highlight of PF Activity"KEK Rrog.Rep.. 2002-20B. 42-43 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto, Y.Takezawa, S.Minakata, T.Kobayashi, H.Tanaka, K.Wakabayashi: "Time-resolved X-ray diffraction studies on skeletal muscle regulation: Intensity changes of the troponin-associated meridional reflections during activation"J.Muscle Rec.Cell Motil.. 22. 205 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa, Y.Sugimoto, T.Kobayashi, K.Wakabayashi: "An alteration of the helical twist of the actin filaments accompanied by a force generation as revealed by the spacing change of the actin-based first layer-line component"J.Muscle Rec.Cell Motil.. 22. 206 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto, Y.Takezawa, S, Minakata, T.Kobayashi, H.Tanaka, K.Wakabayashi: "Time-resolved X-ray diffraction studies on skeletal muscle regulation : Intensity changes of the troponin-associated meridional reflections"Photon Factory Activity Rep.. 18B. 231 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto, T.Okamura, T.Arata, Y.Takezawa, K.Wakabayashi: "An X-ray solution scattering study on the conformation of pPDM-crosslinked myosin subfragment-1 trapping MgADP"Photon Factory Activity Rep.. 18B. 233 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] J.Higo, Y.Sugimoto, K.Wakabayashi, H.Nakamura: "Collective motions of myosin head derived from backbone molecular dynamics and combination with X-ray solution scattering data"J.Conput.Chem.. 22. 1983-1994 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa, Y.Sugimoto, T.Kobayashi, K.Oshima, K.Wakabayashi: "Alteration if the helical twist associated with the shortening of the thin actin filaments upon activation of skeletal muscles"Photon Factory Activity Rep.. 19B. 204 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Wakabayashi: "Molecular mechanism of muscle contraction studied by X-ray diffraction using PF synchrotron radiation"KEK Proceedings. 2001-24. 143-161 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa, Y.Sugimoto, T.Kobayashi, K.Wakabayashi: "Alteration of the helical twist associated with the shortening of the thin actin filaments upon activation of skeletal muscle"J.Muscle Res.Cell Motil.. 23. 176 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto, Y.Takezawa, S.Minakata, T.Kobayashi, H.Tanaka, K.Wakabayashi: "Time-resolved X-ray diffraction studies on skeletal muscle regulation Intensity changes of the troponin-associated meridional reflections"Photon Factory Activity Rep.. 20B. 237 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Yamada, Y, Takezawa, H.Iwamoto, S.Suzuki, K.Wakabayashi: "Rigor force producing cross-bridges in skeletal muscle fibers activated by a sub-stoichiomeric amount of ATP"Biophys.J.. 85. 1741-1753 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Oshima, Y.Takezawa, Y.Sugimoto, M.Kiyotoshi, K.Wakabayashi: "Modeling analysis of myoshin-based meridional X-ray reflections from frog skeletal muscle in relaxed and contracting states"Adv.Exp.Med.Biol.. 538. 243-249 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Takezawa, Y.Sugimoto, K.Wakabayashi: "Actin as the generator element of force in muscle contraction, in Highlight of PF Activity"KEK Prog.Rep.. 2001-1. 41-42 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto, T.Arata, K.Wkabayashi: "Energy transducing conformation changes of myosin motor proteins, in Highlight of PF Activity"KEK Prog.Rep.. 2002-20B. 42-43 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Wakabayashi, Y.Ueno, Y.Sugimoto, Y.Takezawa: "Macmillan Nature Publishing Group"Muscle contraction mechanism : Use of synchrotron radiation, Encyclopedia of Life Sciences.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Sugimoto: "Energy Transducing Conformation Changes of Myosin Motor Proteins"Photon Factory Act. Rep. Highlight. 2002-20B. 42-43 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Kobayashi: "The Effect of Successive Stretches on the X-ray Diffraction Pattern in Tetanized Frog Skeletal Muscle"Photon Factory Act.Rep.. 2002-20B. 223 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Oshima: "A Periodicity and an Axial Disposition of Two-Headed Myosin Crossbridges along the Thick Filaments of Frog Skeletal Muscles in Relaxed and Contracting States"Photon Factory Act.Rep.. 2002-20B. 236 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Sugimoto: "Time-resolved X-ray Diffraction Studies on Skeletal Muscle Regulation : Intensity Changes of the Troponin-associated Meridonal Reflections"Photon Factory Act.Rep.. 2002-20B. 237 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Fujiwara: "Analysis of the Muscle Structure from Neutron Fiber Diffraction Measurements Using the Contrast Variation Method"JAERI-Review. 2003-09. 280 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Yamada: "Rigor Force Producing Cross-bridges in Skeletal Muscle Fibers Activated by a Sub-stoichiometric Amount of ATP"Biophys.J.. 85. 1741-1753 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 若林克三: "タンパク質分子機械の作動機構の構造学的アプローチ-筋収縮のエネルギー変換の構造的基礎"物理学が拓くバイオサイエンス(日本物理学会大阪支部). 49-57 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Oshima: "Modeling Analysis of Myosin-based Meridional X-ray Reflections from Skeletal Muscle in Relaxed and Contraction States"Adv.Exp.Med.Biol.. 538. 243-249 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Okumura: "An X-ray Solution Scattering Study on the Conformation of Skeletal Muscle Myosin Subfragment-1 in the Presence of Mn^<2+> and ATP"Photon Factory Act. Rep.. 19, Part B. 203 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Takezawa: "Alteration of the Helical Twist Associated with the Shortening of the Thin Actin Filaments upon Activation of Skeletal Muscle"Photon Factory Act. Rep.. 19, Part B. 204 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Wakabayashi: "Molecular Mechanism of Muscle Contraction Studied by X-ray Diffraction Using PF Synchrotron Radiations"KEK Proceedings. 2001-24. 143-161 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Tanaka: "The Time Lag Between the X-ray Intensity Changes and the Tension Development on Muscle Contraction"KEK Proceedings. 2001-24. 162-170 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Takezawa: "Alteration of the Helical Twist Associated with the Shortening of the Thin Actin Filament upon Activation of Skeletal Muscle"J. Muscle Res. Cell Motility. 23. 176 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Fujiwara: "Neutron Fiber Diffraction of Frog Muscle Combined with the Construct Variation Measurements"JAERI-Review. 2002-014. 266 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Fujiwara: "Analysis of the Muscle Structure from Neutron Fiber Diffraction Measurements Using the Contrast Variation Method"JAERI-Review. 2002-028. 87 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 若林克三: "分子機械としての筋肉のエネルギー変換-原子レベルでの解明を目指して"生体医工学. 40,特別号. 31 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Wakabayashi: "Changes of the Helical Structure and Shortening of Thin Actin Filaments upon Activation of Skeletal Muscle"Biophys. J. 84,Suppul., No.2. 245a (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] N.Umeki: "Conformational Changes of Myosin Motor Domain Induced by Photochromic Molecules"Biophys. J. 84,Suppul., No.2. 453a (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Oshima: "Modeling Analysis of Myosin-based Meridional X-ray Reflections from Skeletal Muscles in Relaxed and Contraction States"Adv. Exp. Med. Biol.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Yamada: "Rigor Force Producing Cross-bridges in Skeletal Muscle Fibers Activated by a Sub-stoichiometric Amount of ATP"Biophys. J. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] J.Higo: "Collective Motions of Myosin Head Derived from Backbone Molecular Dynamics and Conformation with X-ray Scattering Data"J. Computational Chem.. 22. 1983-1994 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] k.Wakabayashi: "Muscle Contraction Mechanisum : Use of Synchrotron X-ray Diffraction"Encyclopedia of Life Sciences (Nature Publishing Group) www.els.net. 1-11 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Wakabayashi: "Actin as the Generator Elemenys of Force in Muscle Contraction"PHOTON FACTORY Act. Rep.. #18A. 41-42 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Y.Takezawa: "An alteration of the helical twist of the actin filaments accompanied by a force generation as revealed by the spacing change of the actin-based first layer"J. Muscle Res. Cell Motil.. 22. 205 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Y.Sugimoto: "Time-resolved X-ray diffraction studies on skeletal muscle regulation : intensity changes of the troponin-related meridional reflections during activation"J. Muscle Res. Cell Motil.. 22. 206 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] S.Fujiwara: "Neutron Fiber Diffraction of Frog Muscle with the Contrast Variation Measurements"J. Phys. Soc. Japan. 70 Suppl.A. 408-410 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Wakabayashi: "Proceedings of Photon Factory Workshop : New Prospects of Non-Crystalline Structural Science by X-ray and Neutron Diffraction/Scattering"High Energy Accelerator Research Organization (KEK). 245 (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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