• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

CONSTRUCTION AND APPLICATION OF CDNA MICROARRAY SPECIALIZED FOR PERIODONTAL IIGAMENT

Research Project

Project/Area Number 13557190
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Periodontal dentistry
Research InstitutionOSAKA UNIVERSITY

Principal Investigator

MURAKAMI Shinya  OSAKA UNIVERSITY, GRADUATE SCHOOL OF DENTISTRY DEPARTMENT OF PERIODNTOLOGY, PROFESSOR, 大学院・歯学研究科, 教授 (70239490)

Co-Investigator(Kenkyū-buntansha) NOZAKI Takenori  OSAKA UNIVERSITY, GRADUATE SCHOOL OF DENTISTRY DEPARTMENT OF PERIODNTOLOGY, ASSISTANT PROFESSOR, 大学院・歯学研究科, 助手 (30263304)
IKEZAWA Kazuhiro  OSAKA UNIVERSITY, DENTAL HOSPITAL DEPARTMENT OF PERIODONTICS, ASSISTANT PROFESSOR, 歯学部附属病院, 講師 (80294114)
SHIMABUKURO Yoshio  OSAKA UNIVERSITY, GRADUATE SCHOOL OF DENTISTRY DEPARTMENT OF PERIODNTOLOGY, ASSOCIATE PROFESSOR, 大学院・歯学研究科, 助教授 (50231361)
MATSUBARA Kenichi  NARA INSTITUTE OF SCIENCE AND TECHNOLOGY DEPARTMENT OF BIOLOGICAL SCIENCE, PROFESSOE, バイオサイエンス研究科, 客員教授
YAMADA Satoru  OSAKA UNIVERSITY, GRADUATE SCHOOL OF DENTISTRY DEPARTMENT OF PERIODNTOLOGY, ASSISTANT PROFESSOR, 大学院・歯学研究科, 助手 (40359849)
高山 真一  大阪大学, 大学院・歯学研究科, 助手 (00314386)
Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥12,100,000 (Direct Cost: ¥12,100,000)
Fiscal Year 2003: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2002: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2001: ¥9,300,000 (Direct Cost: ¥9,300,000)
Keywordsperiodontal ligament / cDNA microarray / gene expression / periodontal disease / cytodifferentiation of PDL cells / 遣伝子発現 / 骨芽細胞 / セメント芽細胞 / ヒト歯根膜 / 3'末端cDNAライブラリ / gene expression profile / DNAチップ / Gene signature / BodyMap
Research Abstract

1. Analysis of gene expression profile of human periodontal ligament
We collected sequences with the 3 -directed cDNA library of human periodontal ligament (PDL), which faithfully represents the composition of the mRNA population. Utilizing the information, we investigated the expression profile of the active genes. We revealed that PDL has a unique active gene expression profile.
2. Identification and characterization of a novel gene, PLAP-1
By analyzing the a gene expression profile of human PDL, we identified a novel gene, which encodes a new member of the small let cine-rich repeat proteoglycan family. We designated it PLAP-1(periodontal ligament associated protein-1). It was shown that PLAP-1 is expressed specifically in PDL in vivo and plays an important role in maintaining homeostasis of PDL.
3. Construction of customized cDNA microarray specialized for human PDL
Selecting genes that are expressed in human PDL, we constructed in-house cDNA microarrays specialized for human PDL, which … More we named PerioGen Chip PerioGen Chip contained 1,600 cDNA clones obtained from the 3 -directed cDNA library of human PDL.
4. Gene expression analysis of PDL utilizing PerioGen Chip Utilizing PerioGen Chip
we analyzed the patterns of gene expression during the cytodifferentiation of PDL cells in vitro. PerioGen Chip analysis identified 15 genes showing twofold or more differential expression during the cytodifferentiation. Among these genes, we focused on DAN gene and Periostin gene which showed strong induction of their transcript. We demonstrated that DAN and Periostin have crucial roles to regulate cytodifferentiation of PDL cells.
5. Gene expression analysis of in vivo periodontal tissues by PerioGen Chip
We performed gene expression analysis of periodontal tissues which were derived from patients with periodontal diseases. We were able to identify several genes which were expressed predominantly in periodontal lesions. This demonstrated that PerioGen Chip can be useful for clinical application. Less

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (13 results)

All Other

All Publications (13 results)

  • [Publications] Satoru Yamada et al.: "Expression profile of active genes in human periodontal ligament and isolation of PLAP-1, a novel SLRP family gene"Gene. 275. 279-286 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shin-ichi Takayama e t al.: "Effects of basic fibroblast growth factor on human gingival epithelial cells"J.Periodontol.. 73. 1467-1473 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 村上 伸也: "塩基性線維芽細胞増殖因子による歯周組織再生の試み"大阪大学歯学雑誌. 47・2. 75-84 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 山田 聡, 村上 伸也: "ゲノム科学時代の歯周病学"日本歯周病学会会誌. 46・1. 1-9 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Satoru Yamada et al.: "Expression profile of active genes in human periodontal ligament and isolation of PLAP-1, a novel SLRP family gene."Gene. 275. 279-286 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shin-ichi Takayama, et al.: "Effects of basic fibroblast growth factor on human gingival epithelial cells."J. Periodontol.. 73. 1467-1473 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shinya Murakami: "Periodontal regeneration using basic fibroblast growth factor."J. of Osaka University Dental Society. 47. 75-84 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Satoru Yamada: "Periodontal researches in the era of genome science."46. 1-9 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Satoru Yamada et al.: "Expression profile of active genes in human periodontal ligament and isolation of PLAP-1.a novel SLRP family gene"Gene. 275. 279-286 (2001)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shin-ichi Takayama et al.: "Effects of basic fibroblast growth factor on human gingival epithelial cells"J.Periodontol.. 73. 1467-1473 (2002)

    • Related Report
      2003 Annual Research Report
  • [Publications] 村上 伸也: "塩基性線維芽細胞増殖因子による歯周組織再生の試み"大阪大学歯学雑誌. 47・2. 75-84 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shin-ichi TAKAYAMA: "Effects of Basic Fibroblast Growth Factor on Human Gingival Epithelial Cells"J. Periodontol. 73. 1467-1473 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Satoru Yamada: "Expression profile of active genes in human periodontal ligament and isolation of PLAP-1, a novel SLRP family gene"Gene. 275・2. 279-289 (2001)

    • Related Report
      2001 Annual Research Report

URL: 

Published: 2001-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi