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Development of Porphyrin as a Molecular Cutter of Genes

Research Project

Project/Area Number 13557199
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Physical pharmacy
Research InstitutionKumamoto University

Principal Investigator

UNO Tadayuki  Kumamoto University, Faculty of Pharmaceutical Sciences, Professor, 薬学部, 教授 (00183020)

Co-Investigator(Kenkyū-buntansha) SASAMOTO Kazumi  Dojin Chemical Institute, Technical Quarter, Director, 技術部長
ISHIKAWA Yoshinobu  Kumamoto University, Faculty of Pharmaceutical Sciences, Assistant, 薬学部, 助手 (00305004)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥14,000,000 (Direct Cost: ¥14,000,000)
Fiscal Year 2002: ¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 2001: ¥7,700,000 (Direct Cost: ¥7,700,000)
KeywordsPorphyrin / Photonuclease / Resonance Ramen Spectroscopy / Telomere / DNA
Research Abstract

In this project, we designed and synthesized novel water-soluble poiphyrins based on our previous research, and intended to develop DNA-cleaving reagent specific to base sequences, through the measurement of DNA-cleaving activity against DNA having various base sequences. The activity was found to be greatly enhanced by zinc insertion into the porphyrin core, and the effect of copper insertion was also examined. The binding property of copper porphyrin with DNA was examined by absorption and resonance Raman spectroscopic technique, and the self stacking of porphyrin was found to be enhanced by the flattening of the porphyrin macrocycle. This in mind, the porphyrin was applied to the inhibition of telomerase activity, expecting to be an anti-cancer drug. Human telomere is composed of thousands of repeats of TTAGGG sequence, and quadruplex structure is produced. The binding property of the copper porphyrin with this sequence was examined, and the external stacking of the porphyrin was suggested. The copper porphyrin greatly stabilized the quadruplex structure, and the inhibition of telomerase activity was strongly suggested. We further synthesized several kinds of porphyrins having long cationic peripheries on the macrocycle. These poiphyrins stabilized the quadruplex similarly, and therefore the cationic groups were supposed to contribute greatly in the binding. In conclusion, we could synthesize porphyrin drugs which bind specifically to a sequence-dependent DNA structure, recognize the structure, and bind selectively.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (14 results)

All Other

All Publications (14 results)

  • [Publications] Yoshinobu Ishikawa: "Efficient photocleavage of DNA by cationic porphyrin-acridine hybrids with the effective length of diamino alkyl linkage"Chem.Pharm.Bull.. 49. 287-293 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa: "Interaction of porphyrins bearing peripheral cationic heterocycles with G-quadruplex DNA"Nucleic Acids Res.Suppl.. 1. 107-108 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Naoki Yamakawa: "Solution Properties and Photonuclease Activity of Cationic Bis-porphyrins Linked with a Series of Aliphatic Diamines"Chem.Pharm.Bull.. 49. 1531-1540 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa: "Potent DNA Photocleavage by Zinc(II) Complexes of Cationic Bis-porphyrins Linked with Aliphatic Diamine"Bioorg.Med.Chem.. 10. 1953-1960 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tadayuki Uno: "Copper Insertion Facilitates Water-Soluble Porphyrin Binding to rA.rU and rA.dT Base Pairs in Duplex RNA and RNA DNA Hybrids"Biochemistry. 41. 13059-13066 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa, Aya Yamashita, and Tadayuki Uno: "Efficient Photocleavage of DNA by Cadonic Porphyrin-acridine Hybrids with the Effective Length of Diamino Alkyl Chain"Chem. Pharm. Bull.. 49. 287-293 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa, Takeshi Yamashita, Yoshikazu Tomisugi, and Tadayuki Uno: "Interaction of porphyrins bearing peripheral cationic heterocycles with G-quadruplex DNA"Nucleic Acids Res.. Suppl.1. 107-108 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Naoki Yamakawa, Yoshinobu Ishikawa, and Tadayuki Uno: "Solution Properties and Photomiclease Aclivity of Cadonic Bis-porphyrins Linked with a Series of Aliphatic Diamines"Chem. Pharm. Bull.. 49. 1531-1540 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa, Naoki Yamakawa, and Tadayuki Uno: "Potent DNA Photocleavage by Zinc(II) Complexes of Cadonic Bis-porphyrins Linked with Aliphatic Diamine"Bioorg. Med. Chem.. 10. 1953-1960 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tadayuki Uno, Katsumasa Aoki, Tomoko Shikimi, Yumi Hiranuma, Yoshikazu Tomisugi, and Yoshinobu Ishikawa: "Copper Insertion Facilitates Water-Soluble Porphyrin Binding to rA.rU and rA.dT Base Pairs in Duplex RNA and RN ADNA Hybrids"Biochemistry. 41. 13059-13066 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshinobu Ishikawa: "Efficient photocleavage of DNA by cationic porphyrin-acridine hybrids with the effective length of diamino alkyl linkage"Chem. Pharm. Bull.. 49. 287-293 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yoshinobu Ishikawa: "Interaction of porphyrins bearing peripheral cationic heterocycles with G-quadruplex DNA"Nucleic Acids Res. Suppl.. 1. 107-108 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Naoki Yamakawa: "Solution Properties and Photonuclease Activity of Cationic Bis-porphyrins Linked with a Series of Aliphatic Diamines"Chem. Pharm. Bull.. 49. 1531-1540 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yoshinobu Ishikawa: "Potent DNA Photocleavage by Zinc(II) Complexes of Cationic Bis-porphyrins Linked with Aliphatic Diamine"Bioorg. Med. Chem.. 10(in press). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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