• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

VIRAL DISPLAY OF MEMBRANE PROTEINS AND ITS APPLICATION TO PROTEIN INTERACTION ANALYSIS

Research Project

Project/Area Number 13558084
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Functional biochemistry
Research InstitutionTHE UNIVERSITY OF TOKYO

Principal Investigator

HAMAKUBO Takao  RESEARCH CENTER FOR ADVANCED SCIENCE AND TECNOLOGY, PROFESSOR, 先端科学技術研究センター, 教授 (90198797)

Co-Investigator(Kenkyū-buntansha) TANAKA Toshiya  GRELAN PHARMACEUTICAL CO. LTD., RESEARCH ASSOCIATE, 研究開発部開発研究所, 研究員
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥14,100,000 (Direct Cost: ¥14,100,000)
Fiscal Year 2002: ¥5,200,000 (Direct Cost: ¥5,200,000)
Fiscal Year 2001: ¥8,900,000 (Direct Cost: ¥8,900,000)
KeywordsMEMBRANE PROTEIN / BACULOVIRUS / NUCLEAR RECEPTOR / MONOCLONAL ANTIBODY / GATA / GPCR / コレステロール代謝 / 蛋白質相互作用
Research Abstract

Membrane proteins are the major targets for the genome based drug discovery in the post-genomic era. In this research we developed a novel expression system for membrane proteins using baculovirus and utilized it to raise specific antibodies against membrane proteins and nuclear receptor superfamily. We found that a novel property of baculovirus expression system that some membrane proteins can be displayed on the budded virus itself. To date we have observed the membrane display of several ER proteins such as sterol regulatory element-binding proteirt-2 (SREBP-2), SREBP cleavage-activating protein (SCAP), HMG-CoA reductase, presenilin, and nicastrin. All of them had proper activities. Also we have succeeded to reconstitute the trimeric G proteins and G protein coupled receptors on the budded baculovirus. Those reconstituted GPCR had high affinity for ligand binding. Thus this viral expression system considered to be very useful for the analysis of membrane proteins. We then utilized this system for making antibody against membrane proteins. We have been succeeded to generate specific monoclonal antibodies against several membrane proteins such as transporter, SCAP, and nicastrin. On the other hand, using gp64 fusion protein, a membrane protein of baculovirus itself, series of monoclonal antibodies has been generated against superfamily of nuclear receptor. We have been achieved to raise 30 monoclonal antibodies out of 48 nuclear receptor family proteins using this system. Thus we have been developed novel viral display system for membrane proteins and its application for antibody generation.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (40 results)

All Other

All Publications (40 results)

  • [Publications] Masuda K, Itoh H, Sakihama T, Akiyama C, Takahashi K, Fukuda R, Yokomizo T, Shimizu T, Kodama T, Hamakubo T.: "A combinatorial G protein-coupled receptor reconstitution system on budded baculovirus : Evidence for Galpha i and Galpha o coupling to a human leukotriene B4 receptor"J Biol Chem.. Apr29(In print). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada Y, Sugiyama A, Yamamoto T, Naito M, Noguchi N, Yokoyama S, Tsujita M, Kawabe Y, Kobayashi M, Izumi A, Kohro T, Tanaka T, Taniguchi H, Koyama H, Hirano K, Yamashita S, Matsuzawa Y, Niki E, Hamakubo T, Kodama T.: "Lipid accumulation in smooth muscle cells under LDL loading is independent of LDL receptor pathway and enhanced by hypoxic conditions"Arterioscler Thromb Vasc Biol.. Oct1;22(10). 1712-1719 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Morikawa S, Takabe W, Mataki C, Kanke T, Itoh T, Wada Y, Izumi A, Saito Y, Hamakubo T, Kodama T.: "The Effect of Statins on mRNA Levels of Genes Related to Inflammation, Coaulation, and Vascular Constriction in HUVEC"J Atheroscler Thromb.. 9(4). 178-183 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Uchiyama Y, Huang Y, Kanamori H, Uchida M, Doi T, Takamizawa A, Hamakubo T, Kodama T.: "Measurement of HCV RdRp activity with C-terminal 21 aa truncated NS5b protein : optimization of assay conditions"Hepatol Res.. Jun;23. 90-97 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saiura A, Kohro T, Yamamoto T, Izumi A, Wada Y, Aburatani H, Sugawara Y, Hamakubo T, Taniguchi T, Naito M, Kodama T, Makuuchi M.: "Detection of an up-regulation of a group of chemokine genes in murine cardiac allograft in the absence of interferon-gamma by means of DNA microarray"Transplantation. May15;73(9). 1480-1486 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Inoue K, Cynshi O, Kawabe Y, Nakamura M, Miyauchi K, Kimura T, Daida H, Hamakubo T, Yamaguchi H, Kodama T.: "Effect of BO-653 and probucol on c-MYC and PDGF-A messenger RNA of the iliac artery after balloon denudation in cholesterol-fed rabbits"Atherosclerosis. Apr;161(2). 353-363 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saiura A, Sugawara Y, Harihara Y, Sata M, Hamakubo T, Kodama T, Makuuchi M.: "Gene expression profile during acute rejection in rat-to-mouse concordant cardiac xenograft by means of DNA microarray"Transpl lnt.. Apr;161. 353-363 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tanaka T, Takeno T, Watanabe Y, Uchiyama Y, Murakami T, Yamashita H, Suzuki A, Aoi R, Iwanari H, Jiang SY, Naito M, Tachibana K, Doi T, Shulman AI, Mangelsdorf DJ, Reiter R, Auwerx J, Hamakubo T, Kodama T.: "The Generation of Monoclonal Antibodies against Human Peroxisome Proliferator-activated Receptors (PPARs)"J Atheroscler Thromb. 9(5). 233-242 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada H, Hashimoto K, Wada Y, Kobayashi M, Izumi A, Sugiyama A, Kohro T, Hamakubo T, Kodama T.: "Extensive oligonucleotide microarray transcriptome analysis of the rat cerebral artery and arachnoid tissue"J Atheroscler Thromb.. 9(5). 224-232 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Mashiba S., Wada Y., Takeya, M., Sugiyama A., Hamakubo T., Nakamura A., Noguchi N., Niki E., Izumi A., Kobayashi M., Uchida K., Kodama T.: "In Vivo Complex Formation of Oxidized 1-Antitrypsin and LDL"Arterioscler.Thromb.Vasc. Biol.21. 1801-1808 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takabe W, Kodama T, Hamakubo T, Tanaka K, Suzuki T, Aburatani H, Matsukawa N, Noguchi N.: "Anti-atherogenic antioxidants regulate the expression and function of proteasome {alpha}-type subunits in human endothelial cells"J Biol Chem. 276(44). 40497-40501 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Umetani M, Mataki C, Minegishi N, Yamamoto M, Hamakubo T, Kodama T.: "Function of GATA transcription factors in induction of endothelial vascular cell adhesion molecule-1 by tumor necrosis factor-alpha"Arterioscler.Thromb.Vasc.Biol. Jun;21(6). 917-922 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Huang Y, Uchiyama Y, Fujimura T, Kanamori H, Doi T, Takamizawa A, Hamakubo T, Kodama T.: "A human hepatoma cell line expressing hepatitis c virus nonstructural proteins tightly regulated by tetracycline"Biochem Biophys Res Commun.. Mar2;281(3). 732-740 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Masuda K, Itoh H, Sakihama T, Akiyama C, Takahashi K, Fukuda R, Yokomizo T, Shimizu T, Kodama T, Hamakubo T.: "A combinatorial G protein-coupled receptor reconstitution system on cudded bacutovirus : Ecidence for Galpha i and Galpha o coupling to a human leukotriene B4 receptor"J Biol Chem.. in print. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada Y, Sugiyama A, Yamamoto T, Naito M, Noguchi N, Yokoyama S, Tsujita M, Kawabe Y, Kobayashi M, Izumi A, Kohro T, Tanaka T, Taniguchi H, Koyama H, Hirano K, Yamashita S, Matsuzawa Y, Niki E, Hamakubo T, Kodama T: "Lipid accumulation in smooth muscle cells under LDL loading is independent of LDL receptor pathway and enhanced by hypoxic conditions"Arterioscler Thromb Vase Biol. 22(10). 1712-1719 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Morikawa S, Takabe W, Mataki C, Kanke T, Itoh T, Wada Y, Izumi A, Saito Y, Hamakubo T, Kodama T: "The Effect of Statins on mRNA Levels of Genes Related to Inflammation, Coagulation, and Vascular Constriction in HUVEC"J Atheroscler Thromb. 9(4). 178-183 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Uchiyama Y, Huang Y, Kanamori H, Uchida M, Doi T, Takamizawa A, Hamakubo T, Kodama T: "Measurement of HCV RdRp activity with C-terminal 21 aa truncated NS5b protein : optimization of assay conditions"Hepatol Res. 23(2). 90-97 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saiura A, Kohro T, Yamamoto T, Izumi A, Wada Y, Aburatani H, Sugawara Y, Hamakubo T, Taniguchi T. Naito M, Kodama T, Makuuchi M: "Detection of an up-regulation of a group of chemokine genes in murine cardiac allograft in the absence of interferon-gamma by means of DNA microarray"Transplantation. 73(9). 1480-1486 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Inoue K, Cynshi O, Kawabe Y, Nakamura M, Miyauchi K, Kimura T, Daida H, Hamakubo T, Yamaguchi H, Kodama T: "Effect of BO-653 and probucol on c-MYC and PDGF-A messenger RNA of the iliac artery after balloon denudation in cholesterol-fed rabbits"Atherosclerosis. 161(2). 353-363 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Saiura A, Sugawara Y, Harihara Y, Sata M, Hamakubo T, Kodama T, Makuuchi M: "Gene expression profile during acute rejection in rat-to-mouse concordant cardiac xenograft by means of DNA microanay"Transpl Int.. 15(11). 535-540 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tanaka T, Takeno T, Watanabe Y, Uchiyama Y, Murakami T, Yamashita H, Suzuki A, Aoi R, Iwanari H, Jiang SY, Naito M, Tachibana K, Doi T, Shulman Al, Mangelsdorf DJ, Reiter R, Auwerx J, Hamakubo T, Kodama T: "The Generation of Monoclonal Antibodies against Human Peroxisome Proliferator-activated Receptors (PPARs)"J Atheroscler Thromb. 9(5). 233-242 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wada H, Hashimoto K, Wada Y, Kobayashi M, Izumi A, Sugiyama A, Kohro T, Hamakubo T, Kodama T: "Extensive oligonucleotide microarray transcriptome analysis of the rat cerevral artery and arachnoid tissue"J Atheroscler Thromb. 9(5). 224-232 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Mashiba S. Wada Y. Takeya, M., Sugiyama A., Hamakubo T, Nakamura A., Noguchi N , Niki E., Izumi A., Kobayashi M., Uchida K., and Kodama T: "In Vivo Complex Formation of Oxidized 1-Antitrypsin and LDL"Arterioscler. Thromb. Vase. Biol.. 21. 1801-1808 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takabe W, Kodama T, Hamakubo T, Tanaka K, Suzuki T, Aburatani H, Matsukawa N, Noguchi N: "Anti-atherogenic antioxidants regulate the expression and function of proteasome {alpha}-type subunits in human endothelial cells"J Biol Chem.. 276(44). 40497-40501 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Umetani M, Mataki C, Minegishi N, Yamamoto M, Hamakubo T, Kodama T: "Function of GATA transcription factors in induction of endothelial vascular cell adhesion molecule-1 by tumor necrosis factor-alpha"Arterioscler Thromb Vase Biol.. 21(6). 917-922 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Huang Y, Uchiyama Y, Fujimura T, Kanamori H, Doi T, Takamizawa A, Hamakubo T, Kodama T: "A human hepatoma cell line expressing hepatitis c virus nonstructural proteins tightly regulated by tetracyclme"Biochem Biophys Res Commun.. 281(3). 732-740 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takao Hamakubo, Tatsuhiko Kodama: "Application of Baculovirus Membrane Display to Antibody Production"Artificial Blood. 11. 54 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Wada Y, Sugiyama A, Yamamoto T, Naito M, Noguchi N, Yokoyama S, Tsujita M, Kawabe Y, Kobayashi M, Izumi A, Kohro T, Tanaka T, Taniguchi H, Koyama H, Hirano K, Yamashita S, Matsuzawa Y, Niki E, Hamakubo T, Kodama T: "Lipid accumulation in smooth muscle cells under LDL loading is independent of LDL receptor pathway and enhanced by hypoxic conditions"Arterioscler Thromb Vasc Biol.. Octl;22(10). 1712-1719 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Morikawa S, Takabe W, Mataki C, Kanke T, Itoh T, Wada Y, Izumi A, Saito Y, Hamakubo T, Kodama T: "The Effect of Statins on mRNA Levels of Genes Related to Inflammation, Coagulation, and Vascular Constriction in HUVEC"J Atheroscler Thromb. 9(4). 178-183 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Uchiyama Y, Huang Y, Kanamori H, Uchida M, Doi T, Takamizawa A, Hamakubo T, Kodama T: "Measurement of HCV RdRp activity with C-terminal 21 aa truncated NS5b protein : optimization of assay conditions"Hepatol Res.. Jun;23. 90-97 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Saiura A, Kohro T, Yamamoto T, Izumi A, Wada Y, Aburatani H, Sugawara Y, Hamakubo T, Taniguchi T, Naito M, Kodama T, Makuuchi M: "Detection of an up-regulation of a group of chemokine genes in murine cardiac allograft in the absence of interferon-gamma by means of DNA microarray"Transplantation. May;73(9). 1480-1486 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Inoue K, Cynshi O, Kawabe Y, Nakamura M, Miyauchi K, Kimura T, Daida H, Hamakubo T, Yamaguchi H, Kodama T: "Effect of BO-653 and probucol on c-MYC and PDGF-A messenger RNA of the iliac artery after balloon denudation in cholesterol-fed rabbits"Atherosclerosis. Apr;161(2). 353-363 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Saiura A, Sugawara Y, Harihara Y, Sata M, Hamakubo T, Kodama T, Makuuchi M: "Gene expression profile during acute rejection in rat-to-mouse concordant cardiac xenograft by means of DNA microarray"Transpl Int.. Nov;15(11). 535-540 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tanaka T, Takeno T, Watanabe Y, Uchiyama Y, Murakami T, Yamashita H, Suzuki A, Aoi R, Iwanari H, Jiang SY, Naito M, Tachibana K, Doi T, Shulman AI, Mangelsdorf DJ, Reiter R, Auwerx J, Hamakubo T, Kodama T: "The Generation of Monoclonal Antibodies against Human Peroxisome Proliferator-activated Receptors (PPARs)"J. Atheroscler Thromb. 9(5). 233-242 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Wada H, Hashimoto K, Wada Y, Kobayashi M, Izumi A, Sugiyama A, Kohro T, Hamakubo T, Kodama T: "Extensive oligonucleotide microarray transcriptome analysis of the rat cerebral artery and arachnoid tissue"J. Atheroscler Thromb. 9(5). 224-232 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Mashiba S. Wada Y. Takeya, M., Sugiyama A., Hamakubo T., Nakamura A., Noguchi N., Niki E., Izumi A., Kobayashi M., Uchida K., Kodama T.: "In Vivo Complex Formation of Oxidized 1-Antitrypsin and LDL"Arterioscler. Thromb. Vasc. Biol.. 21. 1801-1808 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takabe W, Kodama T, Hamakubo T, Tanaka K, Suzuki T, Aburatani H, Matsukawa N, Noguchi N.: "Anti-atherogenic antioxidants regulate the expression and function of proteasome{alpha}-type subunits in human endothelial cells"J Biol Chem.. 276(44). 40497-40501 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Saiura A, Mataki C, Murakami T, Umetani M, Wada Y, Kohro T, Aburatani H, Harihara Y, Hamakubo T, Yamaguchi T, , Hasegawa G, Naito M, Makuuchi M, Kodama T.: "A comparison of gene expression in murine cardiac allografts and isografts by means DNA microarray analysis"Transplantation. 72(2). 320-329 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Umelani M, Mataki C, Minegishi N, Yamamoto M, Hamakubo T, Kodama T.: "Function of GATA transcription factors in induction of endothelial vascular cell adhesion molecule-1 by tumor necrosis factor-alpha"Arterioscler Thromb Vasc Biol.. 21(6). 917-922 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Huang Y, Uchiyama Y, Fujimura T, Kanamori H, Doi T, Takamizawa A, Hamakubo T, Kodama T.: "A human hepatoma cell line expressing hepatitis c virus nonstructural proteins tightly regulated by tetracycline"Biochem Biophys Res Commun.. 281(3). 732-740 (2001)

    • Related Report
      2001 Annual Research Report

URL: 

Published: 2001-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi