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Viral factors that determine viremia titers of hepatitis C virus in Indonesia

Research Project

Project/Area Number 13576015
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Virology
Research InstitutionKobe University

Principal Investigator

HOTTA Hak  Kobe Univ, Grad Sch Med, Professor, 大学院・医学系研究科, 教授 (40116249)

Co-Investigator(Kenkyū-buntansha) OHGIMOTO Shinji  Kobe Univ, Grad Sch Med, Assistant, 大学院・医学系研究科, 助手 (80292853)
NAGANO Motoko  Kobe Univ, Grad Sch Med, Assistant, 大学院・医学系研究科, 助手 (90304089)
ISHIDO Satoshi  Kobe Univ, Grad Sch Med, Associate Professor, 大学院・医学系研究科, 助教授 (10273781)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥9,700,000 (Direct Cost: ¥9,700,000)
Fiscal Year 2002: ¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2001: ¥6,000,000 (Direct Cost: ¥6,000,000)
KeywordsIndonesia / hepatitis C virus / subtype / viremiatiter / NS5A / interferon / ISDR / mutation
Research Abstract

1. Correlation between ISDR mutations and HCV RNA titers:
HCV strains obtained from patients in Surabaya, Indonesia, and their serum HCV RNA titers were examined. The number of amino acid mutations in IFN sensitivity-determining region (ISDR) and PKR-binding domain of NS5A of HCV-1b, -1c and -2a were inversely correlated with serum HCV RNA titers. HCV strains with 4 more mutations in ISDR had significantly lower HCV RNA titers than those with fewer mutations.
2. Interaction between HCV NS5A and 2',5'-oligoadenylate synthetase.
Possible interaction between HCV NS5A and 2',5'-oligoadenylate synthetase (2-5AS), a key molecule for IFN-mediated antiviral action, was studied. NS5A and 2-5AS were colocalized in cultured cells, especially in the perinuclear region of the cytoplasm. NS5A physically interacted with 2-5AS in cultured cells, with an N-terminal region of 148 residues (aa1-148) of NS5A, which lacks ISDR and PKR-binding domain, being responsible for the interaction. On the other hand, two separate regions of 2-5AS were independently involved in the interaction with NS5A. Single point mutations were introduced to the 37th residue of NS5A(1-148), such as Phe-to-Leu (F37L), F37N, F37S and F37Y, and effects of those mutations on the degree of interaction with 2-5AS were studied. The results showed that the F37L mutation increased binding to 2-5AS while the F37N mutation decrease it. Virus rescue assay revealed that NS5A(1-148) counteracted antiviral activity of IFN to practically the same extent as that achieved by the full-length NS5A. Interestingly, NS5A(1-148)F37N, which bound to 2-5AS less efficiently, had weaker activity to counteract IFN antiviral activity compared with the wild-type NS5A(1-148).
3. Summary of the present study.
Our present results collectively suggest that NS5A counteracts IFN antiviral activity not only through an ISDR-dependent mechanism but also through an ISDR-independent mechanism, which possibly involves interaction with 2-5AS.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] Ogata, Satoshi: "Competitive sequence analysis of the core protein and its frameshift product, the F protein, of hepatitis C virus subtype 1b strains obtained from patients with and without hepatocellular carcinoma"J Clin Microbiol. 40. 3625-3630 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Correlation between secondary structure of an amino-terminal portion of the nonstructural protein 3 (NS3) of hepatitis C virus and development of hepatocellular carcinoma"Microbiol Immunol. 46. 549-554 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Florese, Ruth: "Inhibition of protein synthesis by the nonstructural proteins NS4A and NS4B of hepatitis C virus"Virus Res. 90. 119-13 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tong, Wen-Yan: "Physical interaction between hepatitis C virus NS4B protein and CREB-RP/ATF6b"Biochem Biophys Res Commun. 299. 366-372 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Oka, Kiyomasa: "Hepatitis C virus core protein selectively inhibits synthesis and accumulation of p21/Wafl and certain nuclear proteins"Microbiol Immunol. 47(In press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Identification of hepatitis C virus (HCV) subtype 1b strains that are highly, or only weakly, associated with hepatocellular carcinoma on the basis of secondary structure of an amino-terminal portion of the HCV NS3 protein"J Clin Microbiol. 41(In press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Itoh, Masae: "Comparative analysis of serum antibody titers against measles virus in vaccinated and naturally infected Japanese individuals of different age groups"J Clin Microbiol. 40. 1733-1738 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Lusida, Maria Inge: "Correlation between mutations in the interferon sensitivity-determining region of NS5A protein and viral load of hepatitis C virus subtypes 1b, 1c, and 2a"J Clin Microbiol. 39. 3858-3864 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshida, Isao: "Inhibition of p21/Waf1/Cip1/Sdi1 expression by hepatitis C virus core protein"Microbiol Immunol. 45. 689-697 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takamatsu, Manabu: "Suppression of serum starvation-induced apoptosis by hepatitis C virus core protein"Kobe J Med Sci. 47. 97-112 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ono, Kazuo: "Contamination of river water by Cryptosporidium parvum oocysts in western Japan"Appl Environ Microbiol. 67. 3832-3836 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ono, Kazuo: "Seasonal distribution of enteropathogens detected from diarrheal stool and water samples collected in Kathmandu, Nepal"Southeast Asian J Trop Med Public Health. 32. 520-526 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Comparative sequence analysis of the core protein and its frameshift product, the F protein, of hepatitis C virus subtype 1b strains obtained from patients with and without hepatocellular carcinoma"J Clin Microbiol. 40. 3625-3630 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Correlation between secondary structure of an amino-terminal portion of the nonstructural protein 3 (NS3) of hepatitis C virus and development of hepatocellular carcinoma"Microbiol Immunol. 46. 549-554 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Florese, Ruth: "Inhibition of protein synthesis by the nonstructural proteins NS4A and NS4B of hepatitis C virus"Virus Res. 90. 119-131 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tong, Wen-Yan: "Physical interaction between hepatitis C virus NS4B protein and CREB-RP/ATF6b"Biochem Biophys Res Commun. 299. 366-372 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Oka, Kiyomasa: "Hepatitis C virus core protein selectively inhibits synthesis and accumulation of p21/Waf1 and certain nuclear"Microbiol Immunol. 47 (in press). (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Identification of hepatitis C virus (HCV) subtype 1b strains that are highly, or only weakly, associated with hepatocellular carcinoma on the basis of secondary structure of an amino-terminal portion of the HCV NS3 protein"J Clin Microbiol. 41 (in press). (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Itoh, Masae: "Comparative analysis of serum antibody titers against measles virus in vaccinated and naturally infected Japanese individuals of different age groups"J Clin Microbiol. 40. 1733-1738 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Lusida, Maria Inge: "Correlation between mutations in the interferon sensitivity-determining region of NS5A protein and viral load of hepatitis C virus subtypes 1b, 1c, and 2a"J Clin Microbiol. 39. 3858-3864 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshida, Isao: "Inhibition of p21/Waf1/Cip1/Sdi1 expression by hepatitis C virus core protein"Microbiol Immunol. 45. 689-697 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takamatsu, Manabu: "Suppression of serum starvation-induced apoptosis by hepatitis C virus core protein"Kobe J Med Sci. 47. 97-112 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ono, Kazuo: "Contamination of river water by Cryptosporidium parvum oocysts in western Japan"Appl Environ Microbiol. 67. 3832-3836 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ono, Kazuo: "Seasonal distribution of enteropathogens detected from diarrheal stool and water samples collected in Kathmandu, Nepal"Southeast Asian J Trop Med Public Health. 32. 520-526 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ogata, Satoshi: "Comparative sequence analysis of the core protein and its frameshift product, the F protein, of hepatitis C virus obtained from patients with and without hepatocellular carcinoma"J Clin Microbiol. 40・10. 3625-3630 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ogata, Satoshi: "Correlation between secondary structure of an amino-terminal portion of the nonstructural protein 3 (NS3) of hepatitis C virus and development of hepatocellular carcinoma"Microbiol Immunol. 46・8. 549-554 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Florese, Ruth: "Inhibition of protein synthesis by the nonstructural proteins NS4A and NS4B of hepatitis C virus"Virus Res. 90. 119-131 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tong, Wen-Yan: "Physical interaction between hepatitis C virus NS4B protein and CREB-RP/ATF6b"Biochem Biophys Res Commun. 299. 366-372 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Oka, Kiyomasa: "Hepatitis C virus core protein selectively inhibits synthesis and accumulation of p21/Waf1 and certain nuclear proteins"Microbiol Immunol. 47・6(In press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Itoh, Masae: "Comparative analysis of serum antibody titers against measles virus in vaccinated and naturally infected Japanese individuals of different age groups"J Clin Microbiol. 40・5. 1733-1738 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Lusida, Maria Inge: "Correlation between mutations in the interferon sensitivity-determining region of NS5A protein and viral load of hepatitis C virus subtypes 1b, 1c, and 2a"J. Clin. Microbiol. 39・11. 3858-3864 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yoshida, Isao: "Inhibition of p21/Waf1/Cip1/Sdi1 expression by hepatitis C virus core protein"Microbiol. Immunol. 45・10. 689-697 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takamatsu, Manabu: "Suppression of serum starvation-induced apoptosis by hepatitis C virus core protein"Kobe J. Med. Sci.. 47. 97-112 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ono, Kazuo: "Contamination of river water by Cryptosporidium parvum oocysts in western Japan"Appl. Environ. Microbiol. 67・9. 3832-3836 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ono, Kazuo: "Seasonal distribution of enteropathogens detected from diarrheal stool and water samples collected in Kathmandu, Nepal"Southeast Asian J. Trop. Med. Public Health. 32・3. 520-526 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Itoh, Masae: "Comparative analysis of serum antibody titers against measles virus in vaccinated and naturally infected Japanese individuals of different age groups"J. Clin. Microbiol. 40(In press). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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