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Specific Metal Ion Recognition Mechanism by Protein Molecule

Research Project

Project/Area Number 13640553
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Inorganic chemistry
Research InstitutionIbaraki University

Principal Investigator

KOHZUMA Takamitsu  Ibaraki University, College of Science, Associate Professor, 理学部, 助教授 (50215183)

Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2003: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2002: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2001: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsMetalloprotein / Copper Protein / Molecullar Recognition / Pseudoazurin / Plastocyanin / UV Resonance Raman / 金属蛋白質 / 弱い相互作用 / ブルー銅蛋白質 / スタッキング / 常磁性NMR / 紫外共鳴ラマンスペクトル / 銅蛋白質
Research Abstract

The UV resonance Raman spectrum of pseudoazurin gives a copper coordinated histidine imidazole band at 1385 cm^<-1>. A characteristic histidine imidazolium Raman band at 1408 cm^<-1> is detected in the UVRR spectrum of Cu(I) pseudoazurin at acidic pH. This supports the protonation of the His81 ligand in the reduced protein at low pH values. The imidazolium Pseudoazurin substituted with Zn^<2+> gave characteristic Raman Bands for the metal ion coordinated imidazole at 1388 cm^<-1> at neutral pH. The histidine imidazole band diminishes in intensity in Zn^<2+> pseudoazurin upon lowering the pH. In all of the metal-substituted pseudoazurins an imidazolium band at 1408 cm^<-1> appears at pH < 4.0. Pseudoazurin substituted with Zn^<2+>, Cd^<2+>, and Ni^<2+> give very similar pH dependence of their X-Pro Raman bands as apo-pseudoazurin. These findings indicate that the metal ion is released from the active site of Zn^<2+>, Cd^<2+>, and Ni^<2+> pseudoazurin at acidic pH accompanied by a change in the protein's secondary structure. This behavior is clearly absent in both the Cu(I) and CU(II) proteins indicating that pseudoazurin discriminates between copper and the other metal ions studied.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (43 results)

All Other

All Publications (43 results)

  • [Publications] Katsuko Sato: "Pseudospecificity of the Acidic Patch of Plastocyanin for the Interaction with Cytochrome f"J.Am.Chem.Soc.. 126. 3028-3029 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hiroko Kodama: "Biochemical Indicator for Evaluation of Connective Tissue Abnormalities in Menkes' Disease"The Journal of Pediatics. 726-728 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sachiko Yanagisawa: "Introduction of a π-π Interaction at the Active Site of a Cupredoxin : Charcterization of the Met16Phe Pseudoazurin Mutant"Biochemistry. 42. 6853-6862 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hyato Morita: "Heteronuclear NMR and UV-Resonance Raman Studies on the molecular mechanism of Zn^<2+> sensing with cyanobacterial transcription factor, SmtB"J.Inorg.Biochem.. 96. 196 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yoshiko Uchida: "Spectroscopic and Electrochemical Properties of the Blue Copper Protein Pseudoazurin H6K Mutant"J.Inorg.Biochem.. 96. 242 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Takamitsu Kohzuma: "Weak Non-Covalent Interaction between a Coordinated Imidazole and an Aromatic Ring Induces New Insights into Protein Function in the Met16 Pseudoazurin Mutants"J.Inorg.Biochem.. 96. 169 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katsuko Sato: "UV Resonance Raman and NMR Spectroscopic Studies on the pH Dependent Metal Ion Release from Pseudoazurin"Inorg.Chim.Acta. 339. 383-392 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Christopher Dennison: "Unusual Properties of Plastocyanin from the Dryopteris crassirhizoma"Biochemistry. 41. 552-560 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 高妻孝光: "タンパク質構造の総合的理解と機能解析へのアプローチ"構造生物. 8. 31-46 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Takamitsu Kohzuma: "Metal ion release mechanism of the copper protein pseudoazurin"J.Inorg.Biochem.. 86. 298 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Claudio Fernandez: "Paramagnetic ^1H NMR study of the metal site in Cu(II) and Co(II)-pseudoazurin"J.Inorg.Biochem.. 86. 217 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sachiko Yanagisawa: "UV resonance Raman spectroscopic studies of redox state dependent behavior of histidine residues in pseudoazurin"J.Inorg.Biochem. 86. 486 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katsuko Sato, Takamitsu Kohzuma, Christopher Dennison: "Pseudospecificity of the Acidic Patch of Plastocyanin for the Interaction with Cytochrome f"J.Am.Chem.Soc.. 126. 3028-3029 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hiroko Kodama, Emi Sato, Yukisige Yanagawa, Hiroshi Ozawa, Takamitsu Kohzuma: "Biochemical Indicator for Evaluation of Biochemical Indicator for Evaluation of Connectie Tissue Abnormalities in Menkes' Disease"The Journal of Pediatics. 142. 726-728 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sachiko Yanagisawa, Katsuko Sato, Makiko Kikuchi, Takamitsu Kohzuma, Christopher Dennison: "Introduction of a π-π Interaction at the Active Site of a Cupredoxin: Characterization of the Met16Phe Pseudoazurin Mutant"Biochemistry. 42. 6853-6862 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Claudio O.Fernandez, Tomotaka Niizeki, Takamitsu Kohzuma, Alejandro J.Vila: "Metal-ligand interactions in perturbed blue copper sites: A Paramagnetic 1H NMR Study of Co(II)-pseudoazurin"JBIC. 8. 75-82 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katsuko Sato, Takamitsu Kohzuma, Christopher Dennison: "Active-Site Structure and Electron-Transfer Reactivity of Plastocyanins"J.Am.Chem.Soc.. 125. 2101-2112 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Takamitsu Kohzuma, Masaya Seki, TOmotake Niizeki: "Weak Non-Covalent Interaction between a Coordinated Imidazole and an Aromatic Ring Induces New Insights into Protein Function in the Met16 Pseudoazurin Mutants"J.Inorg.Biochem.. 96. 169 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hayato Morita, Miki Wakamatsu, Shinjiro Okuro, Takamitsu Kohzuma, Hidenori Hayashi: "Heteronuclear NMR and UV-Resonance Raman Studies on the molecular mechanism of Zn^<2+> sensing with cyanobacterial transcription factor, SmtB"J.Inorg.Biochem.. 96. 194 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yoshiko Uchida, Rehab F.Abdelhamid, Takamitsu Kohzuma: "Spectroscopic and Electrochemical Properties of the Blue Copper Protein Pseudoazurin H6K Mutant"J.Inoug.Biochem.. 96. 242 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Antonio Donaire, Beatriz jimenez, Claudio O.Fernandez, Roberta Pierattelli, Tomotake Niizeki, Jose-Maria Moratal, John F.Hall, Takamitsu Kohzuma, S.Samar Hasnain, Alejandro J.Vila: "Metal-ligand ingerplay in blue copper proteins studied by 1H NMR spectroscopy Cu(II)-pseudoazurin and Cu(II)-rusticyanin"J.Am.Chem.Soc.. 124. 13698-13708 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katsuko Sato, Shigenori Nagatomo, Christopher Dennison, Tomotake Niizeki, Teizo Kitagawa, Takamitsu Kohzuma: "UV Resonance Raman and NMR Spectroscopic Studies on the pH Dependent Metal Ion Release from pseudoazurin"Inorg.Chim.Acta. 339. 383-392 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] C.Dennison, A.T.Lawler, T.Kohzuma: "Unusual Properties of Plastocyanin from the Fern Dryopteris crasshirhizoma"Biochemistry. 41. 552-560 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Kohzuma, T.Niizeki, K.Sato, C.Dennison, S.Nagatomo, T.Kitagawa: "Metal Ion Release Mechanism of the Blue Copper Protein Pseudoazurin"J.Inorg.Biochem.. 86. 298 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Yanagisawa, M.Aki, T.Kitagawa, T.Kohzuma: "UV Resonance Raman Spectroscopic Studies of Redox State Dependent Behavior of Histidine Residues in Pseudoazurin"J.Inorg.Biochem.. 86. 486 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] C.O.Fernandez, T.Kohzuma, A.J.Villa: "Paramagenetic 1H NMR Study of the Metal Site in CU(II) and Co(II)-pseudoazurin"J.Inorg.Biochem.. 86. 217 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hiroko Kodama: "Biochemical Indicator for Evaluation of Connective Tissue Abnormalities in Menkes' Disease"The Journal of Pediatics. 142. 726-728 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sachiko Yanagisawa: "Introduction of a π-π Interaction at the Active Site of a Cupredoxin : Charcterization of the Met16Phe Pseudoazurin Mutant"Biochemistry. 42. 6853-6862 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hayato Morita: "Heteronuclear NMR and UV-Resonance Raman Studies on the molecular mechanism of Zn^<2+> sensing with cyanobacterial transcription factor, SmtB"J.Inorg.Biochem.. 96. 194 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yoshiko Uchida: "Spectroscopic and Electrochemical Properties of the Blue Copper Protein Pseudoazurin H6K Mutant"J.Inorg.Biochem.. 96. 242 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takamitsu Kohzuma: "Weak Non-Covalent Interaction between a Coordinated Imidazole and an Aromatic Ring Induces New Insights into Protein Function in the Met16 Pseudoazurin Mutants"J.Inorg.Biochem.. 96. 169 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Claudio O.Fernandez: "Metal-ligand interactions in perturbed blue copper sites : A Paramagnetic 1H NMR Study of Co(II)-pseudoazurin"JBIC. 8. 75-82 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Katsuko Sato: "Active-Site Structure and Electron-Transfer Reactivity of Plastocyanins"J. Am. Chem. Soc.. 125. 2101-2112 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Antonio Donaire: "Metal-ligand interplay in blue copper proteins studied by 1H NMR spectroscopy : Cu(II)-pseudoazurin and Cu(II)-rusticyanin"J. Am. Chem. Soc.. 124. 13698-13708 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Katsuko Sato: "UV Resonance Raman and NMR Spectroscopic Studies on the pH Dependent Metal Ion Release from Pseudoazurin"Inorg. Chim. Acta. 339. 383-392 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takamitsu Kohzuma: "A Mechanistic Approach to the Space Experiment of Crystal Growth of a Heme Protein"J. Japanise Assoc. Crystal Growth. 29. 385-395 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] C.Dennison: "Unusual Properties of Plastocyanin from the Fern Dryopteris crasshirhizoma"Biochemistry. 41. 552-560 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 高妻孝光 他5名: "UV Resonance Raman and NMR Spectroscopic Studies on the pH Dependent Metal lon Release from Pseudoazurin"Inorg. Chim. Acta. (in press).

    • Related Report
      2001 Annual Research Report
  • [Publications] 高妻孝光 他5名: "Metal ion release mechanism of the copper protein pseudoazurin"J. Inorg. Biochem.. 86・1. 298 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 高妻孝光 他2名: "Paramagnetic ^1H NMR study of the metal site in Cu(II) and Co(II)-pseudoazurin"J. Inorg. Biochem.. 86・1. 217 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 高妻孝光 他3名: "UV resonance Raman spectroscopic studies of redox state dependent behavior of histidine residues in pseudoazurin"J. Inorg. Biochem.. 86・1. 486 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 高妻孝光 他2名: "Unusual Properties of Plastocyanin from the Dryopteris crassirhizoma"Biochemistry. 41・2. 552-560 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] 高妻孝光 他2名: "タンパク質構造の総合的理解と機能解析へのアプローチ"構造生物学. (印刷中).

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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