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Analysis of the preiotropic effects of a nucleus-encoded σ factor during chloroplast development

Research Project

Project/Area Number 13640641
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionThe University of Tokyo

Principal Investigator

KANAMARU Kengo  institute of Molecular and Cellular Biosciences, Assistant professor, 分子細胞生物学研究所, 助手 (90260025)

Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2002: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2001: ¥3,300,000 (Direct Cost: ¥3,300,000)
Keywordschloroplast / σ factor / transcriptional regulation / tRNA / tetrapyrrole / 転写制御 / シロイヌナズナ / テトラピロール合成
Research Abstract

A eubacterial-type RNA polymerase (PEP) in higher plants plays crucial roles in chloroplast development. Six regulatory sigma factor genes (SIG1 to SIG6) encoded in the nuclear DNA are found in Arabidpopsis, however, the definite gene specificity of each sigma factor is still unknown. We recently identified an Arabidopsis recessive pale-green mutant sig2-1 (formerly named abc1) in which T-DNA is inserted in SIG2 (formerly named sigB ; Atlg08540). This mutant could develop almost normal etioplasts under dark conditions but barely develop the small chloroplasts with poor thylakoid membranes and stacked lamellar under light conditions. In the sig2-1 mutant, both chlorophyll and photosynthetic and photosynthesis-related proteins were remarkably reduced. However, amounts of mRNAs for these plastid-encoded proteins were not altered.
Further analyzes revealed that several plastid-encoded tRNAs including trnE-UUC were drastically reduced in the mutant. The plastid-encoded tRNA-Glu is indispensable for not only protein synthesis (translation) but also tetrapyrrole (chlorophyll and heme) biogenesis. We could assign -35 like and -10 like sequences to upstream of these SIG2-dependent tRNA genes, which are conserved in Arabidopsis, tobacco, spinach, rice and maize. On the other hand, transcripts of nucleus-encoded T7 phage-type RNA polymerase (NEP)-dependent genes were steadily accumulated in this mutant. These results indicate that SIG2 plays crucial roles in chloroplast development mediated by expression of some plastid-encoded tRNAs and negative regulation of NEP.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] Kanamaru, K., Tanaka, K.: "Function of a nuclear-encoded sigma factor in chloroplasts ; SIG2-dependent expression of some plastid-encoded tRNA genes including trnE in Arabidopsis thaliana"Symbiosis and Cellular Organelles (Proceedings of Endocytobiology VIII). (in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kanamaru, K.et al.: "An Arabidopsis sigma factor (SIG2)-dependent expression of plastid-encoded tRNAs in chloroplasts"Plant & Cell Physiology. 42. 1034-1043 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 藤原徹, 太田啓之, 金丸研吾: "シロイヌナズナDNAアレイコンソーシアム(JCAA)の活動"蛋白質・核酸・酵素. 47. 91-93 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kanamaru, K. & Tanaka, K.: "Function of a nuclear-encoded sigma factor in chloroplasts ; SIG2-dependent expression of some plastid-encoded tRNA genes including trnE in Arabidopsis thaliana"Symbiosis and Cellular Organelles (Proceedings of Endocytobiology VIII). in press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kanamaru, K. et al.: "An Arabidopsis sigma factor (SIG2)-dependent expression of plastid-encoded tRNAs in chloroplasts"Plant & Cell Physiology. 42. 1034-1043 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kengo KANAMARU: "Function of a nuclear-encoded sigma factor in chloroplasts; SIG2-dependent expression of some plastid-encoded tRNA genes including trnE in Arabidopsis thaliana"Symbiosis and Cellular Organelles. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kengo KANAMARU: "An Arabidopsis sigma factor (SIG2)-dependent expression of plastid-encoded tRNAs in chloroplasts"Plant & Cell Physiology. 42. 1034-1043 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Kanamaru, A.Nagashima, M.Fujiwara, et al.: "An Arabidopsis sigma factor (SIG2)-dependent expression of plastid-encoded tRNAs in chioroplasts"Plant & Cell Physiology. 42(10). 1034-1043 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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