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Research on genetic alterations in colorectal carcinomas using the crypt isolation method.

Research Project

Project/Area Number 13670187
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionIwate Medical University

Principal Investigator

SUGAI Tamotu  Iwate Med.univ., school of medicine, Assistant Professor, 医学部, 助教授 (20187628)

Project Period (FY) 2001 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2004: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 2003: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2002: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2001: ¥1,900,000 (Direct Cost: ¥1,900,000)
KeywordsCrypt isolation method / Colorectal cancer / Loss of heterozygosity / Microsatellite instability / Tumor heterogeneiry / 腫瘍内遺伝子多様 / LOH / CIMP / 腺管分離 / 単一腺管 / 大腸腺腫 / APC / DNA ploidy / Ki-ras / MSI / p53 / Loss of heterozygisity / ATM / Genomic instability
Research Abstract

Genetic changes related to colorectal carcinomas are accumulated in individual tumor glands during disease progression. Microsatellite allelic analysis of individual tumor glands from 30 colorectal carcinomas using a polymerase chain reaction (PCR) assay coupled with crypt isolation was used to detect intratumoral genetic heterogeneity, the sequence of allelic imbalances (AIs), and the microsatellite instability (MSI) status of single tumor glands during neoplastic progression. In addition, the CpG islands methylated phenotype (CIMP) status was examined using a methylation-specific PCR method. The specimens were divided into two groups: a pooled gland sample, which was composed of more than 50 tumor glands, and a single tumor gland sample. The latter consisted of ten single tumor glands, which were obtained from the same tumor separately. Most colorectal carcinomas (27 of 30 tumors) examined were heterogeneous for at least one genetic alteration, with from two to seven genotypically different subclones detected per tumor. In 12 of the 27 heterogenous tumors, it was possible to define the order of genetic alterations during the tumor progression. By analyzing multiple single tumor glands within the same tumor, we found that various subclonal expansions were seen within the same tumors. Finally, the Al pattern of single tumor glands was not correlated with CIMP status. Most carcinomas appeared to have a heterogenous composition. This may have resulted from the successful progression of one clone that had different Ms in many chromosomal regions. This suggests that knowledge of the different genotypes of multiple single tumor glands may help to clarify the process of tumor progression.

Report

(5 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (53 results)

All 2005 2004 2003 2002 2001 Other

All Journal Article (36 results) Publications (17 results)

  • [Journal Article] Analysis of allelic imbalances at multiple cancer-related chromosomal loci and microsatellite instability within the same tumor using a single tumor gland from colorectal carcinomas.2005

    • Author(s)
      Sugai T, Habano W, et al.
    • Journal Title

      Int J Cancer 114

      Pages: 337-345

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Resection of liver metastasis from extrahepatic bile duct carcinoma previously treated by pancreatoduodenectomy.2004

    • Author(s)
      Sasaki R, Sugai T, et al.
    • Journal Title

      Hepatogastroenterology 51

      Pages: 245-246

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of the Crypt Isolation Technique to the Flow Cytometric Analysis of DNA Content in gastric Carcinoma.2004

    • Author(s)
      Jiao YF, Sugai T, et al.
    • Journal Title

      Hum Pathol 35・5

      Pages: 587-593

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of mucin, p53 protein, and Ki-67 expressions in gastric differentiated-type intramucosal neoplastic lesions obtained from endoscopic mucosal resection samples : A proposal for a new classification of intramucosal neoplastic lesions based on nuclear atypia.2004

    • Author(s)
      Sugai T, Inomata M, et al.
    • Journal Title

      Pathol Int 54・6

      Pages: 425-435

    • NAID

      10020556156

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Ki-ras gene mutations within the same tumor using a single tumor crypt in colorectal carcinomas.2004

    • Author(s)
      Ishii M, Sugai T, et al.
    • Journal Title

      J Gastroenterol 39・6

      Pages: 544-549

    • NAID

      10013296228

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Analysis of microsatellite alterations in gastric carcinoma using the crypt isolation technique.2004

    • Author(s)
      Jiao Yu, Sugai T, et al.
    • Journal Title

      J Pathol 204

      Pages: 200-207

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Three independent genetic profiles based on mucin expression in early differentiated-type gastric cancers-a new concept of genetic carcinogenesis of esrly differentiated-type adenocarcinomas.2004

    • Author(s)
      Sugai T, Habano W, et al.
    • Journal Title

      Modern Pathol 17

      Pages: 1223-1234

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Promoter hypermethylation of DAP-kinase is associated with poor survival in primary biliary tract carcinoma patients.2004

    • Author(s)
      Tozawa T, Sugai T, et al.
    • Journal Title

      Cancer Sci 95

      Pages: 741-744

    • NAID

      10014197338

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of the Crypt Isolation Technique to the Flow Cytometric Analysis of DNA Content in Gastric Carcinoma.2004

    • Author(s)
      Jiao YF, Sugai T, et al.
    • Journal Title

      Hum Pathol 35

      Pages: 587-593

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of mucin, p53 protein and Ki-67 expressions in gastric differentiated-type intramucosal neoplastic lesions obtained from endoscopic mucosal resection samples : A proposal for a new classification of intramucosal neoplastic lesions based on nuclear atypia.2004

    • Author(s)
      Sugai T, Inomata M, et al.
    • Journal Title

      Pathol Int 54

      Pages: 425-435

    • NAID

      10020556156

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Ki-ras gene mutations within the same tumor using a single tumor crypt in colorectal carcinomas.2004

    • Author(s)
      Ishii M., Sugai T., et al.
    • Journal Title

      J Gastroenterol 39

      Pages: 544-549

    • NAID

      10013296228

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of microsatelilte alterations in gastric carcinoma using the crypt isolation technique.2004

    • Author(s)
      Jiao Yu, Sugai T, et al.
    • Journal Title

      J Pathol 204

      Pages: 200-207

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Three independent genetic profiles based on mucin expression in early differentiated-type gastric cancers-a new concept of genetic carcinogenesis of esrly differentiated-type adenocarcinomas.2004

    • Author(s)
      Sugai T, Habano W, et al.
    • Journal Title

      Modem Pathol 17

      Pages: 1223-1234

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of allelic imbalances at multiple cancer-related loci and microsatellite' instability within the same tumor using a single chromosomal tumor gland from colorectal carcinomas.2004

    • Author(s)
      Sugai T, Habano W, et al.
    • Journal Title

      Int Cancer 114

      Pages: 337-345

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of the Crypt Isolation Technique to the Flow Cytometric Analysis of DNA Content in Gastric Carcinoma.2004

    • Author(s)
      Jiao YF, Sugai T, et al.
    • Journal Title

      Hum Pathol 35・5

      Pages: 587-593

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Analysis of mucin, p53 protein and Ki-67 expressions in gastric differentiated-type intramucosal neoplastic lesions obtained from endoscopic mucosal resection samples : A proposal for a new classification of intramucosal neoplastic lesions based on nuclear atypia.2004

    • Author(s)
      Sugai T, Inomata M, et al.
    • Journal Title

      Pathol Int 54・6

      Pages: 425-435

    • NAID

      10020556156

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Three independent genetic profiles based on mucin expression in early differentiated-type gastric cancers-a new concept of genetic carcinogenesis of esrlv differentiated-type adenocarcinomas.2004

    • Author(s)
      Sugai T, Habano W, et al.
    • Journal Title

      Modern Pathol 17

      Pages: 1223-1234

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Analysis of genetic alterations, classified according to their DNA ploidy pattern, in the progression of colorectal adenomas and early colorectal carcinomas.2003

    • Author(s)
      Sugai T, et al.
    • Journal Title

      J Pathol 200

      Pages: 168-176

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Evolution of DNA ploidy state and DNA index in colorectal adenomas and carcinomas using the crypt isolation technique : New hypothesis in colorectal tumorigenesis.2003

    • Author(s)
      Sugai T, et al.
    • Journal Title

      Pathol Int 53

      Pages: 154-162

    • NAID

      10010532858

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Adenoma, adenocarcinoma and mixed carcinoid-adenocarcinoma arising in a small lesion of the colon.2003

    • Author(s)
      Jiao YF, Sugai T, et al.
    • Journal Title

      Pathol Int 53

      Pages: 457-462

    • NAID

      50000278433

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Reduced expression and loss of heterozygosity of the SDHD gene in colorectal and gastric cancer.2003

    • Author(s)
      Habano W, Sugai T, et al.
    • Journal Title

      Oncol Rep 10

      Pages: 1375-1380

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Ki-ras and p53 gene mutations in laterally spreading tumors of the colorectum.2003

    • Author(s)
      Noro A, Sugai T, et al.
    • Journal Title

      Pathol Int 53

      Pages: 828-836

    • NAID

      10012162275

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of genetic alterations, classified according to their DNA ploidy pattern, in the progression of colorectal adenomas and early colorectal carcinomas.2003

    • Author(s)
      Sugal T, et al.
    • Journal Title

      J Pathol 200

      Pages: 168-176

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Adenoma, adenocarcinoma and mixed carcinoid-adenocarcinoma arising in a small lesion of the colon.2003

    • Author(s)
      Jiao YF, Sugal T, et al.
    • Journal Title

      Pathol Int 53

      Pages: 457-462

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Reduced expression and loss of heterozygosity of the SDHD gene in colorectal and gastric cancer.2003

    • Author(s)
      Habano W, Sugal T, et al.
    • Journal Title

      Oncol Rep 10

      Pages: 1375-1380

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Allelotype Analysis of the PTEN, Smad4 and DCC Genes in Biliar Tract Cancer.2002

    • Author(s)
      Suto T, Sugai T, et al.
    • Journal Title

      Anticanser Res 22

      Pages: 1529-1536

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular Validation of the Modified Vienna Classification of Colorectal Tumors.2002

    • Author(s)
      Sugai T, et al.
    • Journal Title

      J Mole Diagn 4

      Pages: 191-200

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of the crypt isolation technique to the assessment of genetic alterations of colorectal carcinomas.2002

    • Author(s)
      Takahashi H, Sugai T, et al.
    • Journal Title

      Pathol Int 52

      Pages: 628-635

    • NAID

      50000723602

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Allelotype Analysis of the FTEN, Smad4 and DCC Genes In Biliary Tract Cancer.2002

    • Author(s)
      SutoT, SugaiT, et al.
    • Journal Title

      Anticanser Res 22

      Pages: 1529-1536

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular Validation of the Modified Vienna Classification of Colorectal Thmors.2002

    • Author(s)
      Sugal T, et al.
    • Journal Title

      J Mole Diagn 4

      Pages: 191-200

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Frequent allelic imbalance at the ATM locus in DNA multiploid colorectal carcinomas.2001

    • Author(s)
      Sugai T, et al.
    • Journal Title

      Oncogene 20

      Pages: 6095-6101

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Ki-ras gene mutations associated with DNA diploid, aneuploid, and multiploid colorectal carcinomas using a crypt isolation technique.2001

    • Author(s)
      Sugai T, et al.
    • Journal Title

      Cytometry 46

      Pages: 345-350

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Infrequent microsatellite instability in biliary tract cancer.2001

    • Author(s)
      Suto T, Habano W, Sugai T, et al.
    • Journal Title

      J Surg Oncol 76

      Pages: 121-126

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Frequent allelic imbalance at the ATM locus in DNA multiploid colorectal carcinomas.2001

    • Author(s)
      Sugai, T.et al.
    • Journal Title

      Oncogene 20

      Pages: 6095-6101

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Ki-ras gene mutations associated with DNA diploid, aneuploid, and multiploid colorectal carcinomas using a crypt isolation technique.2001

    • Author(s)
      Sugai, T.et al.
    • Journal Title

      Cytometry 46

      Pages: 345-350

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Infrequent microsatellite instability in biliary tract cancer.2001

    • Author(s)
      Suto T, Habano W, Sugal T, et al.
    • Journal Title

      J Surg Oncol 76

      Pages: 121-126

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Sugai T, et al.: "Analysis of genetic alterations, classified according to their DNA ploidy pattern, in the progression of colorectal adenomas and early colorectal carcinomas."J Pathol. 200. 168-176 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sugai T, et al.: "Evolution of DNA ploidy state and DNA index in colorectal adenomas and carcinomas using the crypt isolation technique -a new hypothesis in colorectal tumorigenesis."Pathol Int. 53. 154-162 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Jiao Y-F, Sugai T, et al.: "Adenoma, adenocarcinoma and mixed carcinoid-adenocarcinoma arising in a small lesion of the colon."Pathol Int. 53. 457-462 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Habano W, Sugai T, et al.: "Reduced expression and loss of heterozygisity of the SDHD gene in colorectal and gastric cancer."Oncol Rep. 10. 1375-1380 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Noro A, Sugai T, et al.: "Analysis of Ki-ras and p53 gene mutations in laterally spreading tumors of the colorectum."Pathol Int. 53. 829-836 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ishii M, Sugai T, et al.: "Analysis of Ki-ras gene mutations within the same tumor using a single tumor crypt in colorectal carcinomas."J Gastroenterol. (in press).

    • Related Report
      2003 Annual Research Report
  • [Publications] Jiao Y-F, Sugai T, et al.: "Application of the crypt isolation technique to the flow cytometric analysis of DNA content in gastric carcinoma."Hum Pathol. (in press).

    • Related Report
      2003 Annual Research Report
  • [Publications] Sugai T, et al.: "Analysis of mucin, p53 protein and Ki-67 expressions in gastric differentiated-type intramucosal neoplastic esions obtained from endoscopic mucosal resection samples : A proposal for a new classification of intramucosal neoplastic lesions based on nuclear atypia."Pathol Int. (in press).

    • Related Report
      2003 Annual Research Report
  • [Publications] Suto T, Sugai T, et al.: "Allelotype analysis of the PTEN, Smad 4 and DCC genes in biliary tract cancer"Anticancer Res. 22. 1529-1536 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sugai T, et al.: "Molecular validation of the modified Vienna classification of colorectal tumors"J Mol Diagn. 4. 191-200 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takahashi H, Sugai T, et al.: "Application of the crypt isolation technique to the assessment of genetic alterations of colorectal carcinomas"Pathol Int. 52. 628-635 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sugai T, et al.: "Analysis of genetic alterations, classified according to their DNA ploidy pattern, in the progression of colorectal adenomas and early colorectal carcinomas"J Pathol. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Sugai T, et al.: "Evolution of DNA ploidy state and DNA index in colorectal adenomas and carcinomas using the crypt isolation technique -a new hypothesis in colorectal tumorigenesis"Pathol Int. 53. 154-162 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Habano W, Sugai T, et al.: "Reduced expression and loss of lieterozygisity of the SDHD gene in colorectal and gastric cancer"Oncol Rep. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Sugai T., et al.: "Frequent allelic imbalance at the ATM locus in DNA multiploid colorectal carcinomas"Oncogene. 20. 6095-6101 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sugai T., et al.: "Analysis of Ki-ras gene mutations associated with DNA diploid, aneuploid and multiploid colorectal carcinomas using a crypt isolation technique"Cytometry. 46. 345-350 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Suto T, Sugai T, et al.: "Infrequent microsatellite instability in biliaiy tract cancer"J Surg Oncol. 76. 121-126 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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