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Research for the exonic splicing enhancer sequences in dysttrophin gene

Research Project

Project/Area Number 13670802
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionKobe University School of Medicine

Principal Investigator

TAKESHIMA Yasuhiro  Kobe University Hospital, Asistant Professor, 医学部附属病院, 助手 (40281141)

Co-Investigator(Kenkyū-buntansha) MATSUO Masafumi  Kobe University School of Medicine, Professor, 医学部, 教授 (10157266)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2002: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 2001: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordsdystrophin / splicing / splicing enhancer sequence / gene therapy / スプライシング
Research Abstract

We have proposed a novel molecular therapy for Duchenne muscular dystrophy (DMD), in which the frameshift mutation causing DMD is changed into the in-frame deletion characteristic of mild form Becker muscular dystrophy (BMD) by inducing exon skipping using an antisense oligonucleotide. We have already clarified that the antisense oligonucleotide against splicing enhancer sequence (SES) in exon 19 of dystrophin gene induced the skipping of exon 19, and the skipping of this exon resulted in the production of the dystrophin protein in DMD myocytes with the deletion of exon 20. To apply this strategy for the treatment of frequent deletion mutations, SES in the exons from deletion hot spot of dystrophin gene were examined.
Because purine-rich sequences within exons are proposed to promote proper splicing as splicing enhancers, purine-rich sequences from three exons (exons 43,46 and 53) were examined for their splicing enhancer activity by using a Drosophila doublesex pre-mRNA. The most powerful activating effect on upstream intron splicing was seen with a sequence from exon 43. A sequence from exon 53 showed relatively low activity, whilst that from exon 46 had little effect. To characterize the splicing enhancer sequences in exons 53 and 46 further, entire exons were divided into 30nt fragments that were examined separately for their splicing enhancer activity. In exon 53, two fragments located at the 5' and 3' ends, respectively, had strong splicing enhancer activity, although they were not the most purine-rich regions of the exon. In contrast, all of the fragments derived from exon 46 had little activity. These results suggest that the antisense oligonucleotide aginst these SESs are useful tool for DMD treatment.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (22 results)

All Other

All Publications (22 results)

  • [Publications] Ito T.: "One of three examined purine-rich sequences selected from dystrophin exons exhibits splicing enhancer activity"Acta Myologica. Vol.20. 151-153 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshima Y.: "Oligonucleotides against a splicing enhancer sequence led to dystrophin production in muscle cells from a Duchenne muscular dystrophy patient"Brain and Development. Vol.23. 788-790 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ito T.: "Purine-rich exon sequences are not necessarily splicing enhancer sequence in the dystrophin gene"Kobe Journal of Medical Science. Vol.23. 193-202 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] R.Suminaga: "A novel cryptic exon in intron 3 of the dystrophin gene was incorporated into dystrophin mRNA with a single nucleotide deletion in exon 5"Journal of Human Genetics. Vol.47. 196-201 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] P.S.Lai: "Comparative study on deletions of the dystrophin gene in three Asian populations"Journal of Human Genetics. Vol.47. 552-555 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] M.Yagi: "Two alternative exons can result from activation of the cryptic splice acceptor site deep within intron 2 of the dystrophin gene in a patient with as yet asymptomatic dystrophinopathy"Human Genetics. Vol.112. 164-170 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Adachi: "Heterogous dystrophin mRNA produced by a novel splice acceptor site mutation in intermediate dystrophinopathy"Pediatric Research. Vol.53. 125-131 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 足立佳代: "ジストロフィン異常症76家系の遺伝子解析"脳と発達. 34巻. 391-397 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ito,T.: "One of three examined purine-rich sequences selected from dystrophin exons exhibits splicing enhancer activity"Acta Myologica. 20. 151-153 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takeshima, Y.: "Oligonucleotides against a splicing enhancer sequence led to dystrophin production in muscle cells from a Duchenne muscular dystrophy patient"Brain and Development. 23. 788-790 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Ito,T.: "Purine-rich exon sequences are not necessarily splicing enhancer sequence in the dystrophin gene"Kobe J.Med.Sci.. 47. 193-202 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Suminaga,R.: "A novel cryptic exon in intron 3 of the dystrophin gene was incorporated into dystrophin mRNA with a single nucleotide deletion in exon 5"J.Hum.Genet.. 47. 196-201 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Lai, P.S.: "Comparative study on deletions of the dystrophin gene in three Asian populations"J.Hum.Genet.. 47. 552-555 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yagi,M.: "Two alternative exons can result from activation of the cryptic splice acceptor site deep within intron 2 of the dystrophin gene in a patient with as yet asymptomatic dystrophinopathy"Hum.Genet.. 112. 164-170 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Adachi, K.: "Heterogous dystrophin mRNA produced by a novel splice acceptor site mutation in intermediate dystrophinopathy"Pediatr.Res.. 53. 125-131 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] R.Suminaga: "A novel cryptic exon in intron 3 of the dystrophin gene was incorporated into dystrophin mRNA with a single nucleotide deletion in exon 5"Journal of Human Genetics. Vol.47. 196-201 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] P.S.Lai: "Comparative study on deletions of the dystrophin gene in three Asian populations"Journal of Human Genetic. Vol.47. 552-555 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Yagi: "Two alternative exons can result from activation of the cryptic splice acceptor site deep within intron 2 of the dystrophin gene in a patient with as yet asymptomatic dystrophinopathy"Human Genetics. Vol.112. 164-170 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Adachi: "Heterogous dystrophin mRNA produced by a novel splice acceptor site mutation in intermediate dystrophlnopathy"Pediatric Research. Vol.53. 125-131 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 足立佳代: "ジストロフィン異常症76家系の遺伝子解析"脳と発達. 34巻. 391-397 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ito T.: "One of three examined purine-rich sequences selected from dystrophin exons exhibits splicing enhancer activity"Acta Myologica. Vol.20. 151-153 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Takeshima Y.: "Oligonucleotides against a splicing enhancer sequence led to dystrophin Production in muscle cells from a Duchenne muscular dystrophy patient"Brain and Development. Vol.23. 788-790 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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