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Investigation of the imprinted domain located at the chromosomal deletion associated with Prader-Willi syndrome

Research Project

Project/Area Number 13670858
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionNational Center of Neurology and Psychiatry

Principal Investigator

KUBOTA Takeo  National Center of Neurology and Psycniatry, Head, 疾病研究第2部, 室長 (70293511)

Co-Investigator(Kenkyū-buntansha) FUKUSHIMA Yoshimitsu  Shinshu University School of Medicine, Professor, 医学部・社会予防医学講座, 教授 (70273084)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2002: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 2001: ¥2,000,000 (Direct Cost: ¥2,000,000)
Keywordsimprinting / domain / methylation / Prader-Willi Syndrome / methylation-specific PCR / translocation / deletion / mono allelic / 染色体 / 欠失 / DNA / 遺伝子
Research Abstract

Prader-Willi syndrome (PWS) is one of the famous diseases that are characterized by obesity and mental retardation. Most of the patients share the same chromosome deletion at 15q11-q13. The deletion always occurs on the paternal chromosome, suggesting involvement of the genomic imprinting. Although several imprinted genes has been discovered within this deletion, it has yet not known whether some additional imprinted genes exist outside of the deletion, "an imprinted domain".
We found a severe PWS patient with a large chromosome 15 deletion and found that its distal breakpoint was located approximately 20kb more telomeric from the common breakpoint of that of the usual PWS patient. Using the cultured cells from this severe patient, we investigated genes (ESTs) mapped in the extra deleted whether some of these are imprinted. As a result, we found that none of these genes was imprinted at least in the lymphoblast cells. Therefore, we could not obtain the proof that indicates the imprinted domain was larger than thought. These above data have recently been published in Clinical Genetics.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] Sakashita K, Kubota T, et al.: "DNA methylation change in the CpG island region of..."J Clin Invest. 108. 1195-1204 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Inoue K, Kubota T, et al.: "Prenatal interphase FISH diagnosis of PLP1 duplication..."Prenat Diagn. 21. 1133-1136 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Akahoshi K, Kubota T, et al.: "Duplication of 15q11.2-q14, including the P gene..."Am J Med Genet. 104. 299-302 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kubota T: "A new assay for the analysis of X-chromosome inactivation in"Brain Dev. 23. S177-S181 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wakui K, Kubota T, et al.: "Familial 14-Mb interstitial deletion at 21q11.2-q21.3 and..."J Hum Genet. 47. 511-516 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Matsumura M, Kubota T, et al.: "Severe Prader-Willi syndrome"Clinical Genet. 63. 79-81 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakashita K, Koike K, Kinoshita T, Shiohara M, Kamijo T, Taniguchi S, Kubota T: "Dynamic DNA methylation change in the CpG island region of p15 during human myeloid development"J Clin Invest. 108. 1195-1204 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Inoue K, Kanai M, Tanabe Y, Kubota T, Kashork CD, Wakui K, Fukushima Y, Lupski JR, Shaffer LG: "Prenatal interphase FISH diagnosis of PLP1 duplication associated with Pelizaeus-Merzbacher disease"Prenat Diagn. 21. 1133-1136 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Akahoshi K, Fukai K, Kato A, Kimiya S, Kubota T, Spritz RA: "Duplication of 15q11.2-q14, including the P gene, in a woman with generalized skin hyperpigmentation"Am J Med Genet. 104. 299-302 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Kubota T: "A new assay for the analysis of X-chromosome inactivation in carriers with an X-linked disease"Brain Dev. 23 Suppl 1. S177-S181 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Wakui K, Toyoda A, Kubota T, Hidaka E,Ishikawa I, Katsuyama T, Sakaki Y, Hattori M,Fuikushima Y: "Familial 14-Mb interstitial deletion at 21q11.2-q21.3 and variable phenotypic expression"J Hum Genet. 47. 511-516 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Matsumura M, Kubota T, Hidaka E, Wakui K, Kadowaki S, Ueta I, Shimizu T, Ueno I, Yamauchi K, Herzing LB, Nurmi E, Sutcliffe JS, Fukushima Y, Katsuyama T: "Severe Prader-Willi syndrome with a large deletion of chromosome 15 due to an unbalanced t(15 ; 22)(q14 ; 11.2) translocation"Clinical Genet. 63. 79-81 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Sakashita K, Kubota T, et al.: "DNA methylation change in the CpG island region of p15 during human myeloid development"J Clin Invest. 108. 1195-1204 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Inoue K, Kubota T, et al.: "Prenatal interphase FISH diagnosis of PLP1 duplication associated with Pelizaeus-Merzbacher disease"Prenat Diagn. 21. 1133-1136 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Akahoshi K, Kubota T, et al.: "Duplication of 15q11.2-q14, including the P gene, in a woman with generalized skin hyperpigmentation"Am J Med Genet. 104. 299-302 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kubota T: "A new assay for the analysis of X-chromosome inactivation in carriers with an X-linked disease"Brain Dev. 23. S177-S181 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Wakui K, Kubota T, et al.: "Familial 14-Mb interstitial deletion at 21q11.2-q21.3 and variable phenotypic expression"J Hum Genet. 47. 511-516 (2001)

    • Related Report
      2002 Annual Research Report
  • [Publications] Matsumura M, Kubota T, et al.: "Severe Prader-Willi syndrome"Clinical Genet. 63. 79-81 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakashita k, et al.: "DNA methylation change in the CpG island region of p15 during human myeloid development"J Clin Invest. 108. 1195-1204 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kondoh T. et al.: "Severe cervical kyphosis in osteopathia striata with cranial sclerosis : case report"Pediatr Radiol. 31. 659-662 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kanegane H, et al.: "Clinical and mutational characteristics of X-linked agammaglobulinemia"J Allerg Clin Immunol. 108. 1012-1020 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Inoue K, et al.: "Prenatal interphase FISH diagnosis of PLP1 duplication associated with Pelizaeus-Merzbacher disease"Prenat Diagn. 21. 1133-1136 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Seki H, et al.: "Mutation frequencies of EXT1 and EXT2 in 43 Japanese families..."Am J Med Genet. 99. 59-62 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Akahoshi K, et al.: "Hyperpigmentation is related to excess copy of P genes a patient with duplication of 15q11.2-q14"Am J Med Genet. 104. 299-302 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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