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Study on the uronate-cycle oxidoreductases that are expressed highly in kidney

Research Project

Project/Area Number 13672290
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionGifu Pharmaceutical University

Principal Investigator

HARA Akira  Gifu Pharmaceutical University, Pharmaceutical Science, Professor, 薬学部, 教授 (00094334)

Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2002: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2001: ¥2,400,000 (Direct Cost: ¥2,400,000)
KeywordsL-xylulose reductase / crystal structure / uranate cycle / xylitol dehydrogenase / L-gulonate dehydrogenase / drug metabolism / SDRファミリー / ジアセチル還元酵素 / 結晶化 / イサチン
Research Abstract

Five percent of glucose metabolized in the uronate cycle, xylitol produced in this cycle has been suggested to be involved in development of diabetic complications. However, the structure and properties of enzymes that produce and metabolize xylitol have not been well studied. In this study, we characterized the following three enzymes of this cycle to elucidate roles other than sugar metabolism.
1. L-Xylulose reductase (XR). The cDNAs for XRs of human and four rodents were isolated, and the properties of the recombinant enzymes were studied. Mammalian XRs are homotetramers belonging to the short-chain dehydrogenase/reductase family, are identical to diacetyl reductase, and reduce various dicarbonyl compounds, some aldehydes and ketones. The enzyme was distributed in many mammalian tissues, in which liver and kidney show high contents of the enzyme. The enzyme was localized on brush-border membranes of renal tubular cells. Human XR was crystallized and determined its crystal structure, … More which had a intramolecular disulfide bond per subunit. In addition, three residues involving in the catalytic mechanism, five substrate-binding residues and structural factors of cold inactivation were elucidated by site-directed mutagenesis. Some specific and selective inhibitors of XR were found by screening and computer-modeling based on the crystal structure, and their permeability into the cell was tested using XR-overexpressed cells. Physiological effects of the XR-gene transgenic and knockout mice were examined.
2. L-Xylitol dehydrogenase (XDH). XDH was highly distributed in liver and kidney of many mammalian tissues. Purification of cytosolic and mitochondrial XDHs of guinea pig liver revealed that they are identical and are sorbitol dehydrogenase that belongs to the medium-chain dehydrogenase/reductase family. The enzyme oxidized several aromatic alcohols.
3. L-Gulonate dehydrogenase (GDH). The tissue distribution of GDH was also the same as those of XR and XDH. The enzymes purified from rabbit liver was dimeric, and its amino acid sequence analysis suggested that this enzyme belongs to the 3-hydroxyacyl CoA dehydrogenase family. GDH accepts several no-sugar compounds as the substrates. Less

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] S.Ishikura, et al.: "Molecular cloning, expression and tissue distribution of hamster diacetyl reductase. Identity with L-xylulose reductase"Chem.-Biol. Interact.. 130-132. 879-889 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Tanaka, et al.: "SDR : Structure, mechanism of action, and substrate recognition"Current Organic Chemistry. 5. 89-111 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Usami et al.: "Characterization of a major form of human isatin reductase and the reduced metabolite"Eur. J. Biochem.. 268. 5755-5763 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishikura, et al.: "Enzymatic Characterization and Subcellular Distribution of a Short-chain Dehydrogenase/Reductase Family Protein, P26h, in Hamster Testis and Epididymis"Biochemistry. 130-132. 879-889 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] J.Nakagawa, et al.: "Molecular characterization of mammalian dicarbonyl/L-xylulose reductase and its localization in kidney"J. Biol. Chem.. 277. 1788-17891 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] O.El-Kabbani, et al.: "Crystallization and preliminary crystallographic analysis of human L-xylulose reductase"Acta Crystallographica. D58. 1379-1380 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishikura, et al.: "Identification of amino acid residues involved in substrate recognition of L-xylulose reductase by site-directed mutagenesis"Chem.Biol. Interact.. 143-144. 543-550 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] V.Carbone, et al.: "Structure-Based Design of Inhibitors of Human L-Xylulose Reductase Modelled into the Active-Site of the Enzyme"Bioorg. Med. Chem. Lett.. (印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishikura., et al.: "Molecular Cloning of a cDNA for Hamster Diacetyl Reductase that Is Identical with L-Xylulose Reductase"Chemico-Biological Interactions. 130-132,879-889 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Tanaka., et al.: "SDR: Structure, Mechanism of Action, and Substrate Recognition"Current Organic Chemistry. 5. 89-111 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishikura., et al.: "Enzymatic Characterization and Subcellular Distribution of a Short-chain Dehydrogenase/Reductase Family Protein, P26h, in Hamster Testis and Epididymis"Biochemistry. 40. 214-224 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Usami., et al.: "Characterization of a Major Form of Human Isatin Reductase and the Reduced Metabolite"European Journal of Biochemistry. 268. 5755-5763 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] J.Nakagawa., et al.: "Molecular Characterization of Mammalian Dicarbonyl/L-Xylulose Reductase and its Localization in Kidney"Journal of Biological Chemistry. 277. 17883-17891 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] O.El-Kabbani., et al.: "Crystallization and Preliminary Crystallographic Analysis of Human L-Xylulose Reductase"Acta Crystallographica. D58. 1379-1380 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishikura., et al.: "Identification of Amino Acid Residues Involved in Substrate Recognition of L-Xylulose Reductase by Site-Directed Mutagenesis"Chemico-Biological Interactions. 143-144,543-550 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] V.Carbone, C., et al.: "Structure-Basee Design of Inhibitors of Human L-Xylulose Reductase Modelled into the Active-Site of the Enzyme"Bioorg. Med. Chem. Lett..

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] J.Nakagawa, et al.: "Molecular characterization of mammalian dicarbonyl/L-xylulose reductase and its localization in kidney"J.Biol.Chem.. 277. 17883-17891 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] O.El-Kabbani, et al.: "Crystallization and preliminary crystallographic analysis of human L-xylulose reductase"Acta Crystallographica. D58. 1379-1380 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Ishikura, et al.: "Identification of amino acid residues involved in substrate recognition of L-xylulose reductase by site-directed mutagenesis"Chem.-Biol.Interact.. 143-144. 543-550 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] V.Carbone, et al.: "Structure-Based Design of Inhibitors of Human L-Xylulose Reductase Modelled into the Active-Site of the Enzyme"Bioorg.Med.Chem.Lett.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Ishikura, et al.: "Molecular cloning, expression and tissue distribution of hamster diacetyl reductase. Identity with L-xylulose reductase"Chem.-Biol.Interact.. 130-132. 879-889 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] N.Tanaka, et al.: "SDR : Structure, mechanism of action, and substrate recognition"Current Organic Chemistry. 5. 89-111 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Usami et al.: "Characterization of a major form of human isatin reductase and the reduced metabolite"Eur.J.Biochem.. 268. 5755-5763 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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