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Desigh Syntlesis and Biological Application of Fluorescence Probes

Research Project

Project/Area Number 13672321
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 医薬分子機能学
Research InstitutionThe University of Tokyo

Principal Investigator

KIKUCHI Kazuya  The University of Tokyo, Graduate School of Pharmaceutical Sciences, Associate Professor, 大学院・薬学系研究科, 助教授 (70292951)

Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2002: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2001: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsFluorescence / Probe / laser / IP_3 / receptor / inactiuation / calcicum / imaging / 小分子CALI / 容量性Ca^<2+>流入 / カルシウムチャネル / IP_3受容体 / タプシガルジン / 小胞体 / 蛍光プローブ / 細胞内Ca^<2+> / Ca^<2+> / クロモフォア / 平滑筋 / 光照射 / 合成小分子
Research Abstract

Chromophore-assisted laser inactivation (CALI) is a powerful method for the study of in situ protein function in cellular processes. By using CALI, it is possible to abrogate the function of a target protein with unprecedented spatiotemporal resolution. However, CALI has some limitations, which restrict wider biological application, owing mainly to the use of antibody for target recognition. One of the undesirable limitations of CALI is the necessity to use invasive methods to introduce antibodies into cells. To solve this problem, we have developed membrane-permeant synthetic small molecules instead of antibodies for molecular recognition, so that we can carry out CALI experiments under physiological conditions. For the implementation of small molecule-based CALI (smCALI), we targeted inositol 1,4,5-trisphosphate receptor (IP_3R), which regulates intracellular Ca^<2+> dynamics and thereby plays an important role in various physiological functions. We synthesized a malachite green-conjugated IP3 analog (MGIP_3/PM) as a smCALI probe and examined the effect of MGIP_3/PM-based CALI in intact DT40 chicken B cells. It was confirmed that smCALI was effective at the cellular level, so we then applied smCALI to clarify the mechanism of capacitative Ca^<2+> entry (CCE), in which involvement of IP_3R was suggested. The thapsigargin-induced CCE remained unaffected in DT40 chicken B cells even after inactivation of IP_3R by smCALI, suggesting that activation of IP_3R is not essential for CCE. Our results demonstrate that smCALI should be a useful method to study spatiotemporal differences of protein function in living cells.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] T.Inoue, K.Kikuchi, K.Hirose, M.Iino, T.Nagano: "Small Molecule-based Laser Inactivation of Inositol 1,4,5-Trisphosphate Receptor"Chemistry & Biology. 8. 9-15 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Hirano, K.Kikuchi, Y.Urano, T.Nagano: "Improved Fluorescent Probes for Zinc, ZnAFs, Suitable for Biological Applications"J. Am. Chem. Soc.. 124. 6555-6562 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Mizukami, T.Nagano, Y.Urano, A.Odani, K.Kikuchi: "A Fluorescent Anion Sensor That Works in Neutral Aqueous Solution for Bioanalytical Application"J. Am. Chem. Soc.. 124. 3920-3925 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H.Takakusa, K.Kikuchi, Y.Urano, S.Sakamoto, K.Yamaguchi, T.Nagano: "Design and Synthesis of an Enzyme-Cleavable Sensor Molecule for Phosphodiesterase Activity Based on Fluorescence Resonance Energy Transfer"J. Am. Chem. Soc.. 124. 1653-1657 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Maruyama, K.Kikuchi, T.Hirano, Y.Urano, T.Nagano: "A Novel, Cell-Permeable, Fluorescent Probe for Ratiometric Imaging of Zinc Ion"J. Am. Chem. Soc.. 124. 10650-10651 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Haruoka, K.Kikuchi et al.: "Design and Synthesis of a Novel Magnetic Resonance Imaging Contrast Agent for Selective Sensing of Zinc Ion"Chem. Biol.. 9. 1027-1032 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Inoue, K. Kikuchi. K. Hirose, M. lino & T. Nagano: "Small Molecule-based Laser Inactivation of Inositol 1, 4, 5-Triphosphate Receptor"Chemistry & Biol. 8. 9-15 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Hirano, K. Kikuchi, Y. Urano & T. Nagano: "Improved Fluorescent Probes for Zinc, ZnAFs, Suitable for Biological Applications"J. Am. Chem. Soc.. 124. 6555-6562 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S. Mizukami, T. Nagano, Y. Urano, A, Odani & K. Kikuchi: "Fluorescent Anion Sensor That Works in Neutral Aqueous Solution for Bioanalytical Application"Am. Chem. Soc.. 124. 3920-3925 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Takakusa, K. Kikuchi, Y. Urano, S. Sakamoto, K. Yamaguchi & T. Nagano: "Design and Synthesis of an Enzyme-Cleavable Sensor Molecule for Phosphodiesterase Activity Based on Fluorescence Resonance Energy Transfer"Am. Chem. Soc.. 124. 1653-1657 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S. Maruyama, K. Kikuchi, T. Hirano, Y. Urano & T. Nagano: "Permeable, Fluorescent Probe for Ratiometric Imaging of Zinc Ion"J. Am. Chem. Soc.. 124. 10650-10651 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Hanaoka, K. Kikuchi. Y. Urano, M. Narazaki, T. Yokawa, S. Sakamoto, K. Yamaguchi & T. Nagano: "Design and Synthesis of a Novel Magnetic Resonance Imaging Contrast Agent for Selective Sensing of Zinc Ion"Chem. Biol.. 9. 1027-1032 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Hirano, K.Kikuchi, Y.Urano, T.Nagano: "Improved Fluorescent Probes for Zinc, ZnAFs Suitable for Biological Applications"J.Am.Chem.Soc.. 124. 6555-6562 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Mizukami, T.Nagano, Y.Urano, A.Odani, K.Kikuchi: "A Fluorescent Anion Sensor that Works in Neutral Aqueous Solution for Biological Application"J.Am.Chem.Soc.. 124. 3920-3925 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Takakusa, K.Kikuchi, Y.Urano, S.Sakamoto, K.Yamaguchi, T.Nagano: "Design and Synthesis of an Enzyme-Cleavable Sensor Molecule for Phosphodiesterase Activity Based on Fluorescence Resonance Energy Transfer"J.Am.Chem.Soc.. 124. 1653-1657 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Maruyama, K.Kikuchi, T.Hirano, Y.Urano, T.Nagano: "A Novel, Cell-Permeable, Fluorescent Probe for Ratiometric Imaging of Zinc Ion"J.Am.Chem.Soc.. 124. 10650-10651 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Hanaoka, K.Kikuchi, Y.Urano, M.Narazaki, T.Yokono, S.Sakamoto, K.Yamaguchi, T.Nagano: "Design and Synthesis of a Novel Magnetic Resonance Imaging Contrast Agent for Selective Sensing of Zinc Ion"Chem.Biol.. 9. 1027-1032 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Ueno, M.Tsukamoto, T.Hirano, K.Kikuchi, M.K.Yamada, N.Nishiyama, T.Nagano, N.Matsuki, Y.Ikegaya: "Mossy Fiber Zn^<2+> Spillover Modulates Heterosynaptic N-methyl-D-aspartate Receptor Activity in Hippocampel CA3 Circuits"J.Cell Biol.. 158. 215-220 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Hanaoka, K.Kikuchi, Y.Urano, T.Nagano: "Selective Sensing of Zic Ion with a Novel Magnetic Resonance Imaging Contrast"J. Chem. Soc. Perkin Trans. 2. 1840-1843 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Inoue, K.Kikuchi, K.Hirose, M.Iino, T.Nagano: "Small Molecule-based Laser Inactivation of Inositol 1, 4, 5-Triphosphatc"Chem. Biol. 8. 9-15 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Takakusa, K.Kikuchi, Y.Urano, T.Hisuchi, T.Nagano: "Intramolecular Fluorescence Resonance Energy Transfer System with Coumarin Donor Included in beta-Cyclodexfrin"Aral. Chem. 73. 1967-1973 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Kojima, M.Hirotani, N.Nakatsubo, K.Kikuchi, Y.Hirata, T.Nagano: "Bioimaging of Nihic Oxide with Fluorescent Indicators Based on Rhodamire Chromophore"Aral. Chem. 73. 939-942 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] H.Kojima, M.Hirata, Y.Kudo, K.Kikuchi, T.Nagano: "Visualization of Oxygen Consumption-dependent Production of Nitric Oxide in Rat Hippocampal Slices during Aglycernia"J. Neurochem. 76. 1404-1410 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] N.Suzuki, H.Kojima, Y.Urano, K.Kikuchi, Y.Hirata, T.Nagano: "Orthogonality of Calcium Concentration and Ability of 4, 5-Diamino fluorescein(DAF-2)to Detect NO"J. Biol. Chem. 277. 47-49 (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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