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Analysis of Microbial Community in Soil to Evaluate Greenhouse Effective Gas, Methane from Siberia.

Research Project

Project/Area Number 13680640
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 環境保全
Research InstitutionNagaoka University of Technology

Principal Investigator

OHASHI Akiyoshi  Nagaoka University of Technology, Associate Professor, 工学部, 助教授 (70169035)

Co-Investigator(Kenkyū-buntansha) ARAKI Nobuo  Nagaoka National College of Technology, Associate Professor, 環境都市工学科, 助教授 (30193072)
HARADA Hideki  Nagaoka University of Technology, Professor, 工学部, 教授 (70134971)
Project Period (FY) 2001 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2002: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywordsgreenhouse effect / FISH technique / high sensitive detection / methane / microorganisms / Siberia / CARD-FISH / soil
Research Abstract

It was difficult to quantify methanogens in Siberia marshland by Fluorescence in situ hybridization (FISH). To overcome problems of FISH with mono fluorescent dye labeled oligonucleotide, we studied methanogens' cell-wall treatments technique to apply high sensitive FISH methods. Targeted four types of methanogenetic cell wall, psudomurein, S-layer, methanochondroitin and sheath, were tested using pure methanogens. Cell wall structure of s-layer and methanochondroitin did not require any further treatments. For cell wall structure specific to pseudomurein and sheath, we found enzymatic treatment is the most effective among all tested treatment methods such various physical and/or chemical treatments. ECF-FISH, HNPP-FISH, and CARD-FISH were tested to select the high sensitive FISH. CARD-FISH has the highest intensity in tested and fluorescent signal was up to 15-folds. The application of cell wall treatment techniques with CARD-FISH for UASB granule sludge and anaerobic digested sludge was successful, indicating the application for other environmental samples.

Report

(3 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "Tyramide Signal Amplificationによるメタン生成古細菌の検出"土木学会年次講演概要集. 57, No.7. 280 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "高感度FISH法による低16S rRNA含量微生物の検出"水環境学会年会講演概要集. 36. 302 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "高感度CARD-FISH法による16S rRNA含量の少ない環境微生物の検出"水環境学会年会講演概要集. 37. 423 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 大橋晶良, 福田江津子, 原田秀樹: "リアルタイムPCR法によるメタン生成古細菌の定量および各種消化汚泥のメタン生成活性評価への適用"水環境学会年会講演概要集. 37. 285 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 大橋晶良, 福田江津子, 原田秀樹: "低活性な汚泥における回分試験からの比活性値評価図解法"水環境学会誌. 26, No3. 167-170 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A. Ohashi, E. Fukuda, H. Harada: "Graphical Estimation of Specific Biological Activity on Sludge with Low Biodegradability by Batch Test and New Analytical Method"Journal of Japan Society on Water environment. 26. 167-170 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Kubota, A. Ohashi, H. Harada: "Identification of Low 16S rRNA Content Microbes in Environments by Fluorescence in situ Hybridization Combined with Catalyzed Reporter Deposition."Proceeding of Annual Conference of Japan Society on Water environment. Kumamoto. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] A. Ohashi, E. Fukuda, H. Harada: "Evalution of Methane Production Activity of Didested Sludge Based on Methanogens Quanitified by Real-time PCR."Proceeding of Annual Conference of Japan Society on Water environment. Kumamoto. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Maki, H. Imachi, Y. Sekiguchi, A. Ohashi, H. Harada: "Attempts at Cultivation of Novel Methanogens by Using Anaerobic, Syntrophic Enrichment Cultures with Molecular Approaches."Proceeding of Annual Conference of Japan Society on Water environment. Kumamoto. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Kubota, A. Ohashi, H. Harada: "Identification of Low 16S rRNA Content Microbes in Environmments by High Sensitive Fluorescence in situ Hybridization."Proceeding of Annual Conference of Japan Society on Water environment. Okayama. (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "Tyramide Signal Amplificationによるメタン生成古細菌の検出"土木学会年次講演概要集. No.7 57. 280 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "高感度CARD-FISH法による16S rRNA含量の少ない環境微生物の検出"水環境学会年会. 37. 423 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 大橋晶良, 福田江津子, 原田秀樹: "低活性な汚泥における回分試験からの比活性値評価図解法"水環境学会誌. 26,No3. 167-170 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 大橋晶良, 福田江津子, 原田秀樹: "リアルタイムPCR法によるメタン生成古細菌の定量および各種消化汚泥のメタン生成活性評価への適用"水環境学会年会. 37. 285 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 久保田健吾, 大橋晶良, 原田秀樹: "高感度FISH法による低16SrNA含量微生物の検出"水環境学会年会講演概要集. (in press). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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