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Studies on low-temperature sensors and the mechanisms of acclimation to low-temperature

Research Project

Project/Area Number 13854002
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field 植物生理
Research InstitutionNational Institute to Basic Biology (2004)
Okazaki National Research Institutes (2001-2003)

Principal Investigator

MURATA Norio  National Institute for Basic Biology, Division of Cellular Regulation, Professor, 環境適応研究部門, 教授 (90011569)

Co-Investigator(Kenkyū-buntansha) SUZUKI Iwane  University of Tsukuba, Graduate School of Life and Environmental Sciences, Assistant Professor, 大学院・生命環境科学研究科, 講師 (10290909)
三上 浩司  岡崎国立共同研究機構, 基礎生物学研究所, 助教授 (40222319)
西山 佳孝  岡崎国立共同研究機構, 基礎生物学研究所, 助手 (30281588)
Project Period (FY) 2001 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥123,370,000 (Direct Cost: ¥94,900,000、Indirect Cost: ¥28,470,000)
Fiscal Year 2004: ¥30,940,000 (Direct Cost: ¥23,800,000、Indirect Cost: ¥7,140,000)
Fiscal Year 2003: ¥30,940,000 (Direct Cost: ¥23,800,000、Indirect Cost: ¥7,140,000)
Fiscal Year 2002: ¥30,940,000 (Direct Cost: ¥23,800,000、Indirect Cost: ¥7,140,000)
Fiscal Year 2001: ¥30,550,000 (Direct Cost: ¥23,500,000、Indirect Cost: ¥7,050,000)
KeywordsCold sensor / Histidine kinase / DNA super-coiling / Response regulater / Cyanobacterium / Ser / Thr protein kinases / 遺伝子発現 / DNAミクロアレイ / セリン・スレオニン・キナーゼ / DNAマイクロアレイ / 酸化ストレスセンサー / ヒスチジン・キナーゼ / マルチ・ストレス・センサー / 塩センサー / マルチ・チャンネル・センサー / 浸透圧センサー / プロテオーム
Research Abstract

(1) The cyanobacterium Synechocystis sp. PCC 6803 contains 44 genes for histidine kinases (Hiks) and 42 genes for response regulators (Rres). We individually inactivated all of these signal transducers and generated knockout libraries. By screening these libraries by cold-inducible expression of genes with genome-wide DNA microarrays we identified Hik33 as only one Hik for cold sensing and Rre 26 and Rre 31 as response regulators located downstreem of Hik33 in the cold signal transduction pathway.
(2) We identified Hik33, which we previously identified as a cold sensor, as a component involved in the signal pathways of hyperosmotic, cold, strong-light and oxidative stress. These findings suggest that Hik33 itself is not specific to the individual stress and that the signal transduction pathways which include Hiks and Rres are more complicated than the simple two-component systems which have been established previously. It is very likely that Hik33 cooperates with other factors that give the specificity to individual stress. Identifications of such factors will be an important subject of further study.
(3) We demonstrated possibilities that some Ser/Thr protein kinases are involved in the cold-signal transduction pathway and that DNA supercoiling may directly sense the cold signals.

Report

(5 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (47 results)

All 2005 2004 2003 2002 2001 Other

All Journal Article (33 results) Publications (14 results)

  • [Journal Article] Osmotic shrinkage of cells of Synechostis sp. PCC6803 by water efflux via aquaporins regulates the osmostress gene expression.2005

    • Author(s)
      A.Shapiguzov, A.A.Lyukevich, S.I.Allakhverdiev, T.V.Sergeyenko, I.Suzuki, N.Murata, D.A.Los
    • Journal Title

      Microbiology 151

      Pages: 447-455

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Indentical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of indivisual genes to different extent in Synechocystis.2005

    • Author(s)
      M.Shoumskaya, K.Paithoonrangsarid, Y.Kanesaki, D.A.Los, V.Zinchenko, I.Suzuki, N.Murata
    • Journal Title

      The Journal of biological Chemistry (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Histidine kinase Hik34 regulates the expression of heat-shock genes and involved in thermo tolerance in Synechocystis2005

    • Author(s)
      I.Suzuki, Y.Kanesaki, J.J.Hall, W.J.Simon, A.Slabas, N.Murata, Suzuki, N.Murata
    • Journal Title

      Plant Physiology (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Osmotic shrinkage of cells of Synechocystis sp. PCC 6803 by water efflux via aquaporins regulates the osmostress-inducible gene expression.2005

    • Author(s)
      A.Shapiguzov, A.A.Lyukevich, S.I.Allakhverdiev, T.V.Sergeyenko, I.Suzuki, N.Murata, D.A.Los
    • Journal Title

      Microbiology 151

      Pages: 447-455

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Histidine kinase Hik34 regulates the expression of heat-shock genes and is involved in thermotolerance in Synechocystis2005

    • Author(s)
      I.Suzuki, Y.Kanesaki, J.J.Hall, A.Slabas, N.Murata
    • Journal Title

      Plant Physiol. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Identical Hik-Rre systems perceive and transduce salt signals and hyperosmotic signals but regulate the expression of distinct sets of genes in Synechocystis.2005

    • Author(s)
      M.Shoumskaya, K.Paithoonrangsarid, Y.Kanesaki, D.A.Los, V.Zinchenko, I.Suzuki, N.Murata
    • Journal Title

      J. Biol. Chem. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Osmotic shrinkage of cells of Synechocystis sp.PCC 6803 by water efflux via aquaporins regulates the osmostress-inducible gene expression.2005

    • Author(s)
      A.Shapiguzov, A.A.Lyukevich, S.I.Allakhverdiev, T.V.Sergeyenko, I.Suzuki, N.Murata, D.A.Los
    • Journal Title

      Microbiology 151

      Pages: 447-455

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extent in Synechocystis.2005

    • Author(s)
      M.Shoumskaya, K.Paithoonrangsarid, Y.Kanesaki, D.A.Los, V.Zinchenko, I.Suzuki, N.Murata
    • Journal Title

      The Journal of Biological Chemistry In press

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Histidine kinase Hik34 regulates the expression of heat-shock genes and involved in thermo tolerance in Synechocystis2005

    • Author(s)
      I.Suzuki, Y.Kanesaki, J.J.Hall, W.J.Simon, A.Slabas, N.Murata, Suzuki, N.Murata
    • Journal Title

      Plant Physiology In press

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The SphS-SphR two-component system is the exclusive sensor for the induction of gene expression in response to phosphate limitation in Synechocystis.2004

    • Author(s)
      S.Suzuki, A.Ferjani, T.Suzuki, N.Murata
    • Journal Title

      The Journal of Biological Chemistry 279

      Pages: 13234-13240

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Gene expression profiling reflects physiologycal processes in salt acclimation in Synechocystis sp. Strain PCC 68032004

    • Author(s)
      K.Marin, Y.Kanesaki, D.A.Los, N.Murata, I.Suzuki, M.Hagemann
    • Journal Title

      Plant Physiology 136

      Pages: 3290-3300

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Five histidine kinases perceive osmotic stress and regulate distinct sets of genes in Synechocystis.2004

    • Author(s)
      K.Paithoonrangsarid, M.Shoumskaya, Y.Kanesaki, S.Satoh, S.Tabata, D.A.Los, V.Zinchenko, H.Hayashi, M.Tanticharoen, I.Suzuki, N.Murata
    • Journal Title

      The Journal of Biological Chemistry 279

      Pages: 53078-53086

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Membrane fluidity and its roles in the perception of environmental signals.2004

    • Author(s)
      D.A.Los, N.Murata
    • Journal Title

      Biochimica et Biophysica Acta (Biomembrane) 1666

      Pages: 142-157

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The SphS-SphR two-component system is the exclusive sensor for the induction of gene expression in response to phosphate limitation in Synechocystis.2004

    • Author(s)
      S.Suzuki, A Ferjani, I.Suzuki, N.Murata
    • Journal Title

      J. Biol. Chem. 279

      Pages: 13234-13240

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Gene expression profiling reflects physiological processes in salt acclimation in Synechocystis sp. strain PCC 68032004

    • Author(s)
      K.Marin, Y.Kanesaki, D.A.Los, N.Murata, I.Suzuki, M.Hagemann
    • Journal Title

      Plant Physiol. 136

      Pages: 3290-3300

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Five histidine kinases perceive osmotic stress and regulate distinct sets of genes in Synechocystis.2004

    • Author(s)
      K.Paithoonrangsarid, M.Shoumskaya, Y.Kanesaki, S.Satoh, S.Tabata, D.A.Los, V.Zinchenko, M.Tanticharoen, I.Suzuki, N.Murata
    • Journal Title

      J. Biol. Chem. 279

      Pages: 53078-53086

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Membrane fluidity and its roles in the perception of environmental signals.2004

    • Author(s)
      D.A.Los, N.Murata
    • Journal Title

      Biochim. Biophys. Acta (Biomembrane) 1666

      Pages: 142-157

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The SphS-SphR two-component system is the exclusive sensor for the induction of gene expression in response to phosphate limitation in Synechocystis.2004

    • Author(s)
      S.Suzuki, A Ferjani, I.Suzuki, N.Murata
    • Journal Title

      The Journal of Biological Chemistry 279

      Pages: 13234-13240

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Gene expression profiling reflects physiological processes in salt acclimation in Synechocystis sp.Strain PCC 68032004

    • Author(s)
      K.Marin, Y.Kanesaki, D.A.Los, Murata, I.Suzuki, M.Hagemann
    • Journal Title

      Plant Physiology 136

      Pages: 3290-3300

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Membrane fluidity and its roles in the perception of environmental signals.2004

    • Author(s)
      D.A.Los, N.Murata
    • Journal Title

      Biochimica et Biophysics Acta(Biomembrane) 1666

      Pages: 142-157

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Gene engineered rigidification of membrane lipids enhances the cold inducibility of gene expression in Synechosystis.2003

    • Author(s)
      M.Inada, I.Suzuki, B.Szalontai, Y.Kanesaki, D.A.Los, H.hayashi, N.Murata
    • Journal Title

      The Journal of Biological Chemistry 278

      Pages: 12191-12198

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Indentification of histidine kinases that act as sensors in the perception of salt stress in synechocystis sp strain PCC 6803.2003

    • Author(s)
      K.Marin, I.Suzuki, K.Yamaguchi, H.Yamamoto, K.Ribbeck, Y.Kanesaki, M.Hagemann, N.Murata
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America 100

      Pages: 9061-9066

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Gene engineered rigidification of membrane lipids enhances the cold inducibility of gene expression in Synechosystis.2003

    • Author(s)
      M.Inaba, I.Suzuki, B.Szalontai, Y.Kanesaki, D.A.Los, H.Hayashi, N.Murata
    • Journal Title

      J. Biol. Chem. 278

      Pages: 12191-12198

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Identification of histidine kinases that act as sensors in the perception of salt stress in Synechocystis sp. strain PCC 6803.2003

    • Author(s)
      K.Marin, I.Suzuki, K.Yamaguchi, H.Yamamoto, K.Ribbeck, Y.Kanesaki, M.Hagemann, N.Murata
    • Journal Title

      Proc. Natl. Acad. Sci. USA 100

      Pages: 9061-9066

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp. PCC 6803.2002

    • Author(s)
      Y.Kanesaki, I.Suzuki, S.I.Allakhverdiev, K.Mikami, N.Murata
    • Journal Title

      Biochemical and Biophysical Research Communications 290

      Pages: 339-348

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Proteomic study of the soluble proteins from the unicellular cyanobacterium Synechocystis sp. PCC6803 using automated MALDI-tof peptide mass fingerprinting.2002

    • Author(s)
      W.J.Simon, J.J.Hall, I.Suzuki, N.Murata, A.R.Slabas
    • Journal Title

      Proteomics 2

      Pages: 1735-1742

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The histidine kinase Hik33 perceives osmotic stress and cold stress in Synechocystis sp. PCC 6803.2002

    • Author(s)
      K.Mikami, Y.Kanesaki, I.Suzuki, N.Murata
    • Journal Title

      Molecular Microbiology 46

      Pages: 905-915

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] A two-component Mn^<2+>-sensing system negatively regulates expression of the mntCAB operon in Sunechocystis.2002

    • Author(s)
      K.Yamaguchi, I.Suzuki, H.Yamamoto, A.Lyukevich, I.Bodrova, D.A.Los, T.Piven, V.Zinchenko, M.Kanehisa, N.Murata
    • Journal Title

      Plant Cell 14

      Pages: 2901-2913

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp. PCC 6803.2002

    • Author(s)
      Y.Kanesaki, I.Suzuki, S.I.Allakhverdiev, K.Mikami, N.Murata
    • Journal Title

      Biochem. Biophys. Res. Commun. 290

      Pages: 339-348

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The histidine kinase Hik33 perceives osmotic stress and cold stress in Synechocystis sp. PCC 68032002

    • Author(s)
      K.Mikami, Y.Kanesaki, I.Suzuki, N.Murata
    • Journal Title

      Mol. Microbiol. 46

      Pages: 905-915

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] A two-component Mn2+-sensing system negatively regulates expression of the mntCAB operon in Synechocystis.2002

    • Author(s)
      K.Yamaguchi, I.Suzuki, H.Yamamoto, A.Lyukevich, I.Bodrova, D.A.Los, I.Piven, V.Zinchenko, M.Kanehisa, N.Murata
    • Journal Title

      Plant Cell 14

      Pages: 2901-2913

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis.2001

    • Author(s)
      I.Suzuki, Y.Kanesaki, K.Mikami, N.Murata
    • Journal Title

      Molecular Microbiology 40

      Pages: 235-244

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis.2001

    • Author(s)
      I.Suzuki, Y.Kanesaki, K.Mikami, N.Murata
    • Journal Title

      Mol. Microbiol. 40

      Pages: 235-244

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] K.Marin: "Identification of histidine kinases that act as sensors in the perception of salt stress in Synechocystis sp.PCC 6803."Proceedings of the National Academy of Science U S A.. 100. 9061-9066 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Ferjani: "Glucosylglycerol, a compatible solute, sustains cell division under salt stress."Plant Physiology. 131. 1628-1637 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] M.Inaba: "Gene-engineered rigidification of membrane lipids enhances the cold inducibility of gene expression in Synechocystis."Journal of Biological Chemistry. 278. 12191-12198 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Suzuki: "The SphS-SphR two component system is the exclusive sensor for the induction of gene expression in response to phosphate limitation in Synechocystis."Journal of Biological Chemistry. In press. (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] R.Sulpice: "Enhanced formation of flowers in salt-stressed Arabidopsis after genetic engineering of the synthesis of glycine betaine."Plant Journal. 36. 165-176 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Mikami: "Membrane fluidity and the perception of environmental signals in cyanobacteria and plants."Progress in Lipid Research. 42. 527-543 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] W.J.Simon: "Proteomic study of the soluble proteins from the unicellular cyanobacterium Synechocystis sp. PCC 6803 using automated MALDI-tof peptide mass fingerprinting"Proteomics. 2. 1735-1742 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.I.Allakhverdiev: "Salt stress inhibits the repair of photodamaged photosystem II by suppressing the transcription and translation of ρsbA genes in Synechocystis"Plant Physiology. 130. 1443-1453 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Mikami: "The histidine kinase Hik33 perceives osmotic stress and cold stress in Synechocystis sp. PCC 6803"Molecular Micro biology. 46. 905-915 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Yamaguchi: "A two-component Mn^<2+-> sensing system negatively regulates expression of the mntCAB operon in Synechocystis"Plant Cell. 14. 2901-2913 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] D.A.Los: "Sensing and response to low temperature in cyanobacteria"Cell and Molecular Reponses to Stress (Elsevier Press). 3. 139-153 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Nishlyama et al.: "Oxidative stress inhibits the repair of photodamage to the photosynthetic machinery"The EMBO Journal. 20. 5587-5594 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Y.Kanesaki et al.: "Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp. PCC6803"Biochemical and Biophysical Research Communications. 290. 339-348 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] A.Sakamoto et al.: "The role of glycine betaine in the protection of plants from stress : clues from transgenic plants"Plant Cell Environment. 25. 163-171 (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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