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Molecular Mechanisms underlying membrane localization and qualify control of lipoproteins in Escherichia coli cell surface

Research Project

Project/Area Number 14037212
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionThe University of Tokyo

Principal Investigator

TOKUDA Hajime (2003-2006)  The University of Tokyo, Institute of Molecular and Cellular Biosciences, Professor (40125943)

松山 伸一 (2002)  東京大学, 分子細胞生物学研究所, 助教授 (50183108)

Co-Investigator(Kenkyū-buntansha) MATSUYAMA Shin-ichi  Rikkyo University, Faculty of Science, Professof (50183108)
徳田 元  東京大学, 分子細胞生物学研究所, 教授 (40125943)
Project Period (FY) 2002 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥129,200,000 (Direct Cost: ¥129,200,000)
Fiscal Year 2006: ¥24,600,000 (Direct Cost: ¥24,600,000)
Fiscal Year 2005: ¥26,400,000 (Direct Cost: ¥26,400,000)
Fiscal Year 2004: ¥29,200,000 (Direct Cost: ¥29,200,000)
Fiscal Year 2003: ¥30,000,000 (Direct Cost: ¥30,000,000)
Fiscal Year 2002: ¥19,000,000 (Direct Cost: ¥19,000,000)
Keywordslipoprotein / ABC transporter / molecular chaperone / Escherichia coli / mambrane localization / outer mambrane / Reconstruction / リポ蛋白質 / 品質管理 / ペリプラズム / プロテアーゼ / 細胞表層 / タンパク質局在化
Research Abstract

An E. coli mutant, which transports the inner membrane-specific lipoprotein to the outer membrane, was isolated. The mutant carried the Asp to Pro mutation in Lo1C subunit of the Lo1CDE complex. The inner membrane-specific sorting signal was found to be a Lo1CDE avoidance signal, thereby causing the retention of lipoproteins in the inner membrane. It was then found that the Lo1CDE avoidance function was affected by phospholipids compositions.
The crystal structures of Lo1A and Lo1B were solved. Their structures were very similar despite that their amino acid sequences were dissimilar. Lo1A and Lo1B have a hydrophobic cavity, which is most likely the binding site for lipoproteins. Functionally important Trp residues in Lo1B were identified. Arg at position 43 of Lo1A was mutated to other residues. Activities of these mutants revealed that differences in the strength of hydrophobic interaction with lipoproteins between Lo1A and Lo1B are critically important for efficient transfer of lipoproteins from Lo1A to Lo1B. Isolation of Lo1A mutants suggested that the hydrophobic cavity undergoes opening and closing upon the binding and release of lipoproteins. Lo1CDE was purified with tightly associated lipoproteins. This is the first example of an ABC transporter that can be isolated with its substrate.
It was found that Pseudomonas aeruginosa also possesses five Lo1 proteins, which play an important role in the outer membrane sorting of lipoproteins. However, the sorting signal in P. aeruginosa was found to be different from that in E. coli.

Report

(6 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (50 results)

All 2007 2006 2005 2004 2003 Other

All Journal Article (31 results) (of which Peer Reviewed: 3 results) Presentation (5 results) Book (2 results) Remarks (1 results) Publications (11 results)

  • [Journal Article] Amino acids at positions 3 and 4 determine the membrane specificity of Pseudomonas aeruginosa lipoproteins.2007

    • Author(s)
      Narita, S.
    • Journal Title

      J. Biol. Chem. 282

      Pages: 13372-13378

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] The Periplasm: Structure, function, and transport of lipoproteins in Escherichia coli.2007

    • Author(s)
      Tokuda, H.
    • Journal Title

      ASM press

      Pages: 67-79

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The Enzymes: The function of the ABC transporter LolCDE in protein transport to the outer membrane of E.coli.2007

    • Author(s)
      Narita, S.
    • Journal Title

      Academic press 25

      Pages: 149-172

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Structure, function and transport of lipoproteins in Escherichia coli.2007

    • Author(s)
      Tokuda, H.
    • Journal Title

      The Periplasm, M. Ehrmann(ed), ASM press

      Pages: 67-79

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A new screening method to identify inhibitors of Lol(localization of lipoproteins)system, a novel antibacterial target.2007

    • Author(s)
      Ito, H.
    • Journal Title

      Microbiol. Immunol. 51

      Pages: 263-270

    • Related Report
      2006 Annual Research Report
  • [Journal Article] The function of the ABC transporter LolCDE in protein transport to the outer membrane of E. coli.2007

    • Author(s)
      Narita, S.
    • Journal Title

      The Enzymes 25

      Pages: 149-172

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Characterization of the Pseudomonas aeruginosa Lol system as a lipoprotein sorting mechanism.2007

    • Author(s)
      Tanaka, S.
    • Journal Title

      J. Biol. Chem. 282

      Pages: 13379-13384

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Diverse effects of phospholipids on lipoprotei sorting and ATP hydrolysis by the ABC transporter LolCDE complex.2007

    • Author(s)
      Miyamoto, S.
    • Journal Title

      Biochim. Biophys. Acta. 1768

      Pages: 1848-1854

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Complete reconstitution of an ATP-binding cassette transporter LolCDE complex from separately isolated subunits.2007

    • Author(s)
      Kanamaru, K
    • Journal Title

      FEBS. J 274

      Pages: 3034-3043

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Roles of the hydrophobic cavity and lid of LolA in the lipoprotein transfer reaction in Escherichia coli.2006

    • Author(s)
      Watanabe, S.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 3335-3342

    • Related Report
      2006 Annual Research Report
  • [Journal Article] (Invited review)An ABC transporter mediating the membrane detachment of bacterial lipoproteins depending on their sorting signals.2006

    • Author(s)
      Narita, S
    • Journal Title

      FEBS Lett. 580

      Pages: 1164-1170

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Purification crystallization and preliminary X-ray crystallographic analysis of the outer membrane lipoprotein NlpE from Escherichia coli.2006

    • Author(s)
      Hirano, Y.
    • Journal Title

      Acta Cryst. F62

      Pages: 1227-1230

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A derivative of lipid A is involved in Signal Recognition Particle/SecYEG-dependent and-independent membrane integarations.2006

    • Author(s)
      Nishiyama, K.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 35667-35676

    • Related Report
      2006 Annual Research Report
  • [Journal Article] A novel ligand bound ABC transporter, LolCDE, provides insights into the molecular mechanisms underlying membrane detachment of bacterial lipoproteins.2006

    • Author(s)
      Ito, Y
    • Journal Title

      Mol. Microbiol. 62

      Pages: 1064-1075

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Genetic analysis of the mode of interplay between an ATP ase subunit and membrane subunits of lipoprotein-releasing ABC transporter LolCDE.2006

    • Author(s)
      Ito, Y
    • Journal Title

      J. Bacteriol. 188

      Pages: 2856-2864

    • Related Report
      2006 Annual Research Report
  • [Journal Article] An ABC transporter mediating the membrane detachment of bacterial lipoproteins depending on their sorting signals.2006

    • Author(s)
      Narita, S.
    • Journal Title

      FEBS Lett. 580

      Pages: 1164-1170

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Roles of the hydrophobic cavity and lid of LolA in the lipoprotein transfer reaction in Escherichia coli.2006

    • Author(s)
      Watanabe, S.
    • Journal Title

      J.Biol.Chem. 281

      Pages: 3335-3342

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structure, function and transport of lipoproteins in Escherichia coli.2006

    • Author(s)
      Tokuda, H.
    • Journal Title

      In The Periplasm(M.Ehrmann(ed))(ASM press) (印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] H.Genetic analysis of the mode of interplay between an ATPase subunit and membrane subunits of lipoprotein-releasing ABC transporter LolCDE.2006

    • Author(s)
      Ito, Y.
    • Journal Title

      J.Bacteriol. (印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mechanisms underlying energy-independent transfer of lipoproteins from LolA to LolB, which have similar unclosed β-barrel structures.2005

    • Author(s)
      Tanigichi, N.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 34481-34488

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Disruption of rpmJ encoding ribosomal protein L36 decreases the expression of secY upstream of the spc operon and inhibits protein translocation in Escherichia coli.2005

    • Author(s)
      Ikegami, A.
    • Journal Title

      Biosci.Biotechnol.Biochem. 69

      Pages: 1595-1602

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 大腸菌リポタンパク質の輸送2005

    • Author(s)
      成田新一郎
    • Journal Title

      実験医学 23

      Pages: 2283-2288

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Sorting of lipoproteins to the outer membrane in E.coli.2004

    • Author(s)
      Tokuda, H.
    • Journal Title

      BBA-Molecular Cell Research 1693

      Pages: 5-13

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Lipoprotein trafficking in Escherichia coli.2004

    • Author(s)
      Narita, S.
    • Journal Title

      Arch.Micorbiol. 182

      Pages: 1-6

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Overexpression of gnsA, a multicopy suppressor of the secG null mutation, increases acidic phospholipid contents by inhibiting phosphatidylethanolamine synthesis at low temperature.2004

    • Author(s)
      Sugai, R.
    • Journal Title

      J.Bacteriol. 186

      Pages: 5968-5971

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Effects of lipoprotein overproduction on the induction of DegP (HtrA) involved in the quality control of Escherichia coli periplasm.2004

    • Author(s)
      Miyadai, H.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 39807-39813

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Targeted mutagenesis of five conserved tryptophan residues of LolB involved in membrane localization of Escherichia coli lipoproteins.2004

    • Author(s)
      Wada, R.
    • Journal Title

      Biochem.Biophys.Res.Commun. 323

      Pages: 1069-1074

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 蛋白質輸送とエンベロープの形成(原核細胞)2004

    • Author(s)
      徳田 元
    • Journal Title

      蛋白質核酸酵素 49

      Pages: 942-949

    • Related Report
      2004 Annual Research Report
  • [Journal Article] A mutation in the membrane subunit of an ABC transporter LolCDE complex causingouter membrane localization of lipoproteins against their inner membrane-specific signals.2003

    • Author(s)
      Narita, S.
    • Journal Title

      Mol. Microbiol. 49

      Pages: 167-177

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Crystal Structures of Bacterial Lipoprotein Localization Factors, LolA and LolB.2003

    • Author(s)
      Takeda, K.
    • Journal Title

      EMBO J. 22

      Pages: 3199-3209

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A mutation in the membrane subunit of an ABC transporter LolCDE complex causing outer membrane localization of lipoproteins against their inner membrane-specific signals.2003

    • Author(s)
      Narita, S.
    • Journal Title

      Mol. Microbiol. 49

      Pages: 167-177

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Sorting of lipoproteins to the outer membrane of gram-negative bacteria2007

    • Author(s)
      Tokuda, H.
    • Organizer
      ASBMB Annual Meeting
    • Place of Presentation
      USA
    • Year and Date
      2007-05-03
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Sorting of lipoproteins to the outer membrane of E. coli2006

    • Author(s)
      Tokuda, H.
    • Organizer
      ASM Conference on Protein traffic in Prokaryotes
    • Place of Presentation
      Greece
    • Year and Date
      2006-05-10
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Sorting of lipoproteins to the outer membrane of E. coli.2006

    • Author(s)
      Tokuda, H.
    • Organizer
      ASM Conference on Protein traffic in Prokaryotes
    • Place of Presentation
      Greece
    • Year and Date
      2006-03-10
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Transport of Lipoproteins to the Outer Membranes by the LOLPathway2003

    • Author(s)
      Tokuda, H.
    • Organizer
      103rd American Society for Microbiology GeneralMeeting : Symposium : Protein Trafficking and Secretion
    • Place of Presentation
      USA
    • Year and Date
      2003-05-21
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Transport of Lipoproteins to the Outer Membranes by the Lol Pathway.2003

    • Author(s)
      Tokuda, H.
    • Organizer
      103rd American Society for Microbiology General Meeting : Symposium : Protein Trafficking and Secretion
    • Place of Presentation
      USA
    • Year and Date
      2003-03-21
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] The Periplasm2007

    • Author(s)
      Tokuda, H.
    • Total Pages
      415
    • Publisher
      ASM press
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] The Enzymes2007

    • Author(s)
      Narita, S.
    • Total Pages
      636
    • Publisher
      Academic press
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://www.iam.u-tokyo.ac.jp/sec/

    • Related Report
      2006 Final Research Report Summary
  • [Publications] Narita, S: "A mutation in the membrane subunit of an ABC transporter LolCDE complex causing outer membrane localization of lipoproteins against their inner membrane-specific signals"Mol.Microbiol.. 49. 167-177 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takeda, K.: "Crystallization and preliminary crystallographic study of the outer membrane lipoprotein receptor LolB. a member of the lipoprotein localization factors"Acta Cryst.. D59. 1224-1226 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takeda, K.: "A practical phasing procedure of MAD method without the aid of XAFS measurements : successful solution in the structure determination of the outer membrane lipoprotein cerrier LolA"Acta Cryst.. D59. 1440-1446 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takeda, K.: "Crystal Structures of Bacterial Lipoprotein Localization Factors, LolA and LolB"EMBO J.. 22. 3199-3209

    • Related Report
      2003 Annual Research Report
  • [Publications] Kato, Y.: "Depletion of SecDF-YajC causes a decrease in the level of SecG : Implication for their functional interaction"FEBS Lett.. 550. 114-118 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hara, T.: "Mechanism underlying the inner membrane retention of E.coli lipoproteins caused by Lol avoidance signals"J.Biol.Chem.. 278. 40408-40414 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 松山伸一: "水に溶けないものが水路を渡る:細菌リポタンパク質の運び屋たち -大腸菌リポタンパク質の選択的膜局在化機構-"実験医学. (印刷中).

    • Related Report
      2002 Annual Research Report
  • [Publications] Fukuda, A.: "Amino-acylation of the N-terminal cysteine is essential for Lol-dependent release of lipoproteins from membranes but does not depend on lipoprotein sorting signals"J. Biol. Chem.. 277. 43512-43518 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Narita, S.: "Disruption of lolCDE, encoding an ATP-binding cassette transporter is lethal for Escherichia coli and prevents the release of lipoproteins from the inner membrane"J. Bacteriol.. 184. 1417-1422 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Masuda, K.: "Elucidation of the function of lipoprotein-sorting signals that determine membrane localization"Proc. Natl. Acad. Sci. USA. 99. 7390-7395 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Miyamoto, A.: "Dominant negative mutant of a lipoprotein-specific molecular chaperone, LolA, tightly associates with LolCDE"FEBS Lett.. 528. 193-196 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2018-03-28  

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