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Structures and functions of protein translocator systems

Research Project

Project/Area Number 14037225
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNagoya University

Principal Investigator

ENDO Toshiya  Nagoya University, Grad. Sch. Science, Professor (70152014)

Co-Investigator(Kenkyū-buntansha) YOSHIHISA Tohru  Nagoya Univ., RCMS, Associate Professor (60212312)
NISHIKAWA Shuh-ichi  Nagoya Univ., Grad, Sch, Science, Associate Prof. (10252222)
Project Period (FY) 2002 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥148,600,000 (Direct Cost: ¥148,600,000)
Fiscal Year 2006: ¥24,600,000 (Direct Cost: ¥24,600,000)
Fiscal Year 2005: ¥24,600,000 (Direct Cost: ¥24,600,000)
Fiscal Year 2004: ¥29,700,000 (Direct Cost: ¥29,700,000)
Fiscal Year 2003: ¥29,700,000 (Direct Cost: ¥29,700,000)
Fiscal Year 2002: ¥40,000,000 (Direct Cost: ¥40,000,000)
Keywordsmitochnodria / translocator / protein translocation / chaperone / unfolding / 酵母 / 膜透過 / NMR / 原子間力顕微鏡 / βバレルタンパク質
Research Abstract

The central process in the maintenance of functional integrity of mitochondria is the transport of 500-1000 different mitochondrial precursor proteins to mitochondria. Since mitochondria consist of four compartments, the outer and inner membranes, intermembrane space, and matrix, the flux of mitochondrial proteins from the cytosol should branch off in four different sub-fluxes that are directed for each of the four compartments. In the present study, we aimed at elucidation of the mechanisms for surveillance and control of the mitochondrial protein fluxes in yeast cells. We identified 5 new components, Tom38, Toml3, Tim4O, Timl5, and Tim4l, of the mitochondrial protein translocators. Besides, we determined the NMR structure of Timl5, and found that the ability of Tim15 to maintain solubility of mitochondrial Hsp70 represents one of the essential functions of Tim15 in yeast cell growth.
Mitochondrial proteins have to become unfolded to move through the translocator channels. Here we found that the translocation channel of the translocator (Tom40) itself has a chaperone-like activity, thereby promoting unfolding of the substrate proteins to be threaded into the narrow translocator channel. We also analyzed the effects of various stabilization/destabilization mutations in the immunoglobulin-like module of the muscle protein titin on its import from the N-terminus or C-terminus into mitochondria. The effects of mutations on the import of the titin module from the N-terminus correlate well with those on forced mechanical unfolding in atomic force microscopy (AFM) measurements. On the other hand, import of the titin module from the N-terminus is sensitive to mutations in the N-terminal region, but not the ones in the C-terminal region that affect resistance to global unfolding in AFM experiments. We propose that the mitochondrial import system can catalyze precursor unfolding by reducing the stability of unfolding intermediates.

Report

(6 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (53 results)

All 2007 2006 2005 2004 2003 Other

All Journal Article (29 results) (of which Peer Reviewed: 3 results) Presentation (2 results) Book (6 results) Publications (16 results)

  • [Journal Article] Identification of Tam41 maintaining integrity of the TIM23 protein translocator complex in mitochondria2006

    • Author(s)
      Y.Tamura, Y.Harada, K.Yamano, K.Watanabe, D.Ishikawa, C.Ohshima, S.Nishikawa, H.Yamamoto, T.Endo
    • Journal Title

      J. Cell Biol. 174

      Pages: 615-623

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Cytoplasmic splicing of tRNA in Saccharomyces cerevisiae2006

    • Author(s)
      T.Yoshihisa, C.Ohshima, K.Yunoki-Esaki, T.Endo
    • Journal Title

      Genes Cells 12

      Pages: 285-297

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 私のチャレンジしたい化学の未解決問題 : オルガネラ構造を自在に操り自らの手で細胞をつくりたい2006

    • Author(s)
      遠藤斗志也
    • Journal Title

      化学 62

      Pages: 20-21

    • Related Report
      2006 Annual Research Report
  • [Journal Article] 核内tRNAの生理的意義2006

    • Author(s)
      吉久 徹, 高野 晃, 遠藤斗志
    • Journal Title

      蛋白質核酸酵素増刊「細胞核の世界」 51

      Pages: 2232-2234

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Comparison of the protein unfolding pathways between mitochondrial protein import and atomic force microscopy measurements.2005

    • Author(s)
      T. Sato, M. Esaki, J. M. Fernandez, T. Endo
    • Journal Title

      Proc. Natl. Acad. Sci. USA 102

      Pages: 17999-18004

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Comparison of the protein unfolding pathways between mitochondrial protein import and atomic force microscopy measurements2005

    • Author(s)
      T. Sato, M. Esaki, J. M. Fernandez, T. Endo
    • Journal Title

      Proc. Natl. Acad. Sci. USA 102

      Pages: 17999-18004

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phosphate carrier has an ability to be sorted to either the TIM22 pathway or TIM23 pathway for its import into yeast mitochondria.2005

    • Author(s)
      K.Yamano, D.Ishikawa, M.Esaki, T.Endo
    • Journal Title

      J.Biol.Chem. 280

      Pages: 10011-10017

    • Related Report
      2005 Annual Research Report 2004 Annual Research Report
  • [Journal Article] Identification of a novel member of yeast mitochondrial Hsp70-associated motor and chaperone proteins that facilitates protein translocation across the inner membrane.2005

    • Author(s)
      H.Yamamoto et al.
    • Journal Title

      FEBS Lett. 579

      Pages: 507-511

    • Related Report
      2005 Annual Research Report 2004 Annual Research Report
  • [Journal Article] Crystallization and preliminary X-ray analysis of mitochondrial presequence receptor Tom20 in complexes with a presequence from ALDH2005

    • Author(s)
      M.Igura, T.Ose, T.Obita, C.Sato, Maenaka, T.Endo, D.Kohda
    • Journal Title

      Acta Cryst Section F61

      Pages: 514-517

    • Related Report
      2005 Annual Research Report
  • [Journal Article] tRNA actively shuttles between the nucleus and cytosol in yeast.2005

    • Author(s)
      A.Takano, T.Endo, T.Yoshihisa
    • Journal Title

      Science 309

      Pages: 140-142

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Comparison of the protein unfolding pathways between mitochondrial protein import and atomic force microscopy measurements2005

    • Author(s)
      T.Sato, M.Esaki, J.M.Fernandez, T.Endo
    • Journal Title

      Proc. Natl. Acad. Sci. USA 102

      Pages: 17999-18004

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 「タンパク質社会学」とは何か2005

    • Author(s)
      永田和宏, 遠藤斗志也
    • Journal Title

      実験医学増刊23「細胞内タンパク質の社会学」

      Pages: 2213-2214

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 概論:タンパク質の一生とタンパク質社会学2005

    • Author(s)
      遠藤斗志也, 永田和宏
    • Journal Title

      実験医学増刊23「細胞内タンパク質の社会学」

      Pages: 2228-2233

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 概説:タンパク質の配送・搬入とタンパク質が通る孔2005

    • Author(s)
      遠藤斗志也
    • Journal Title

      実験医学増刊23「細胞内タンパク質の社会学」

      Pages: 2272-2275

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ミトコンドリアの外膜内膜の孔2005

    • Author(s)
      遠藤斗志也, 山本 林
    • Journal Title

      実験医学増刊23「細胞内タンパク質の社会学」

      Pages: 2297-2301

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ミトコンドリアの膜透過装置2005

    • Author(s)
      西川周一, 遠藤斗志也
    • Journal Title

      細胞工学 24

      Pages: 786-790

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ミトコンドリア内にタンパク質が取込まれる仕掛け2005

    • Author(s)
      遠藤斗志也
    • Journal Title

      現代化学 2月号

      Pages: 28-33

    • NAID

      40006595656

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Two novel proteins in the mitochondrial outer membrane mediate β-barrel protein assembly.2004

    • Author(s)
      D. Ishikawa, H. Yamamoto, Y. Tamura, K. Moritoh, T. Endo
    • Journal Title

      J. Cell Biol. 166

      Pages: 621-627

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Two novel proteins in the mitochondrial outer membrane mediate β-barrel protein assembly2004

    • Author(s)
      D. Ishikawa, H. Yamamoto, Y. Tamura, K. Moritoh, T. Endo
    • Journal Title

      J. CellBiol. 166

      Pages: 621-627

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 小胞体品質管理におけるシャペロンと糖鎖の役割:何が異常で何を除去すべきか2004

    • Author(s)
      西川周一, 中務邦雄, 遠藤斗志也
    • Journal Title

      蛋白質核酸酵素増刊「細胞における蛋白質の一生」 49

      Pages: 988-991

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 総論 蛋白質の移動(真核生物):細胞内の交通管制システムがはたらく仕組み2004

    • Author(s)
      遠藤斗志也, 吉久 徹
    • Journal Title

      蛋白質核酸酵素増刊「細胞における蛋白質の一生」 49

      Pages: 877-888

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Protein transport to and within plant chloroplasts2004

    • Author(s)
      T.Endo
    • Journal Title

      Endocytobiosis Cell Res. 15

      Pages: 294-299

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Roles of O-mannosylation of aberrant proteins in reduction of the load for endoplasmic reticulum chaperones in yeast2004

    • Author(s)
      K.Nakatsukasa et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 49762-49772

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Identification of Tim40 that mediates protein sorting to the mitochondrial intermembrane space2004

    • Author(s)
      M.Naoe et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 47815-47821

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Mitochondrial protein import : Requirement of the presequence elements and TOM components for precursor binding to the TOM complex2004

    • Author(s)
      M.Esaki et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 45701-45707

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Two novel proteins in the mitochondrial outer membrane mediate β-barrel protein assembly2004

    • Author(s)
      D.Ishikawa et al.
    • Journal Title

      J.Cell Biol. 166

      Pages: 621-627

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Re-investigation of the requirement of cytosolic ATP for mitochondrial protein import2004

    • Author(s)
      T.Asai et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 19464-19470

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Tom40 protein import channel binds to non-native proteins and prevents their aggregation.2003

    • Author(s)
      M. Esaki, T. Kanamori, S. Nishikawa, I. Shin, P. G Schultz, T. Endo
    • Journal Title

      Nature Struct. Biol. 10

      Pages: 988-994

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Tom40 protein import channel binds to non-native proteins and prevents their aggregation2003

    • Author(s)
      M. Esaki, T. Kanamori, S. Nishikawa, I. Shin, P. G. Schultz, T. Endo
    • Journal Title

      Nature Struct. Biol. 10

      Pages: 988-994

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Functional network of mitochondrial translocator complexes2007

    • Author(s)
      Toshiya Endo
    • Organizer
      GRC Protein Transport Across Cell Membranes
    • Place of Presentation
      I1 Ciosso, Italy
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] Functional network of mitochondrial translocator complexes2007

    • Author(s)
      T. Endo
    • Organizer
      GRC Protein Transport Across Cell Membranes
    • Place of Presentation
      I1Ciosso, Italy
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] タンパク質の一生 : 集中マスター(研究の歴史 : 渾沌の前史から「タンパク質の一生」研究が開花するまで)2007

    • Author(s)
      遠藤斗志也, 吉久 徹, 森 和俊, 田口英樹
    • Total Pages
      12
    • Publisher
      羊土社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Book] In 'Bio-research master series : Life of proteins'2007

    • Author(s)
      T. Endo, T. Yoshihisa, K. Mori, H. Taguchi
    • Total Pages
      146
    • Publisher
      Yodo-sha
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] タンパク質の一生 : 集中マスター(ブレイクスルーとなった実験法を中心に : そのとき「タンパク質の一生」研究の歴史が動いた)2007

    • Author(s)
      遠藤斗志也, 吉久 徹, 森 和俊, 田口英樹
    • Publisher
      羊土社
    • Related Report
      2006 Annual Research Report
  • [Book] タンパク質の一生 : 集中マスター(ブローベル・コード : 交通管制という問題)2007

    • Author(s)
      遠藤斗志也, 吉久 徹, 森 和俊, 田口英樹
    • Publisher
      羊土社
    • Related Report
      2006 Annual Research Report
  • [Book] タンパク質の一生 : 集中マスター(トランスロコンはどうやって組立てられるのか)2007

    • Author(s)
      遠藤斗志也
    • Publisher
      羊土社
    • Related Report
      2006 Annual Research Report
  • [Book] タンパク質科学:構造,物性,機能 第11章(1)タンパク質の膜透過装置2005

    • Author(s)
      西川周一, 遠藤斗志也
    • Total Pages
      379
    • Publisher
      化学同人
    • Related Report
      2005 Annual Research Report
  • [Publications] 遠藤斗志也, 江崎雅俊, 山本 林, 古久 徹: "ミトコンドリアをめぐるタンパク質フラックス"実験医学増刊 細胞内輸送研究の最前線. 21. 1889-1895 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 遠藤斗志也: "序にかえて:細胞内タンパク質の運命"実験医学. 21. 866-868 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 山本 林, 江崎雅俊, 遠藤斗志也: "ミトコンドリアトランスロケータの連係プレー:タンパク質配送の迷宮 2つの膜で囲まれたミトコンドリアの問題"実験医学. 21. 880-885 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Nishikawa et al.: "Nep98p is a component of the yeast spindle pole body and essential for nuclear division and fusion"J.Biol.Chem.. 278. 9938-9943 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Obita et al.: "Peptide library approach with a disulfide tether to refine the Tom20 recognition motif in mitochondrial presequences."J.Mol.Biol.. 328. 495-504 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Endo et al.: "Functional cooperation and separation of translocators in protein import into mitochondria, the double-membrane bounded organelles. (Commentary Article)"J.Cell Science. 116. 3259-3267 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Yoshihisa et al.: "Possibility of Cytoplasmic pre-tRNA Splicing : the Yeast tRNA Splicing Endonuclease Mainly Localizes on the Mitochondria"Mol.Biol.Cell. 14. 3266-3279 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] M.Esaki et al.: "Tom40 protein import channel binds to non-native proteins and prevents their aggregation"J.Cell Science. 116. 3259-3267 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Asai et al.: "Re-investigation of the requirement of cytosolic ATP for mitochondrial protein import"J.Biol.Chem.. (印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Yamamoto et al.: "Tim50 is a subunit of the TIM23 complex that links protein ranslocation across the outer and inner mitochondrial membranes"Cell. 111. 519-528 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Nishikawa et al.: "Nep98p is a component of the yeast spindle pole body and essential for nuclear division and fusion"J.Biol.Chem.. 278. 9938-9943 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Obita et al.: "Peptide library approach with a disulfide tether to refine the Tom20 recgnition motif in mitochondrial presequences"J.Mol.Biol.. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Endo, D.Kohda: "Functions of outer membrane receptors in mitochondrial protein import"Biochim.Biophys.Acta. 1592. 3-14 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 遠藤斗志也, 小代俊浩, 江崎雅俊: "ミトコンドリアへのタンパク質移行:難問/論争にいかに決着をつけたか"実験医学. 20. 980-986 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 遠藤斗志也: "オルガネラ形成と分子シャペロン-細胞が用意したタンパク質支援システム"生物の科学-遺伝 別冊. 14. 96-106 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Endo(分担執筆): "Genome Science -Towards a New Paradaigm? (H.Yoshikawa, N.Ogasawara, and N.Satoh, eds) (Elsevier Science Amsterdam)"Mitochondrial protein flux. 274 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2018-03-28  

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