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ER Stress-sensing system and Analyses of its signal transduction mechanism.

Research Project

Project/Area Number 14037240
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNara Institute of Science and Technology

Principal Investigator

KOHNO Kenji  Nara Institute of Science and Technology, Department of Cell Biology, Professor (50142005)

Co-Investigator(Kenkyū-buntansha) TSURU Akio  Nara Institute of Science and Technology, Department of Cell Biology, Assistant Professor (80273861)
木俣 行雄  奈良先端科学技術大学院大学, 遺伝子教育研究センター, 助手 (60263448)
Project Period (FY) 2002 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥139,300,000 (Direct Cost: ¥139,300,000)
Fiscal Year 2006: ¥24,600,000 (Direct Cost: ¥24,600,000)
Fiscal Year 2005: ¥24,600,000 (Direct Cost: ¥24,600,000)
Fiscal Year 2004: ¥26,100,000 (Direct Cost: ¥26,100,000)
Fiscal Year 2003: ¥36,500,000 (Direct Cost: ¥36,500,000)
Fiscal Year 2002: ¥27,500,000 (Direct Cost: ¥27,500,000)
KeywordsER stress / chaperone / quality control of proteins / stress-sensing / 小胞体 / 転写調節 / シグナル伝達 / 構造異常蛋白質 / unfolded protein response / 小胞体シャペロン / BiP / Ire1 / GFP / XBP1 / IRE1 / スプライシング / UPR / Bip / DnaJ
Research Abstract

In order to analyze the sensing mechanism of endoplasmic reticulum (ER)-stress at the molecular level, we have done systematic mutagenesis of N-terminal luminal region of ER stress sensor Ire1 in budding yeast. This result shows that the luminal region is divided into five subregions I to V and that subresions II and IV are essential for stress recognition. ER chaperone BiP associates subregion V under normal condition and the dissociation of BiP from Ire1 is required for the activation of unfolded protein response (UPR), which maintains the homeostasis of the ER under ER stress. However, dissociation of BiP from Ire1 is not sufficient for the activation of Ire1, another step is needed for full activation. Immunofluorescence and immunoelectron microscopic studies, reporter assay using various Ire1-luminal region mutants, and biochemical analysis of direct interaction between Ire1-luminal domain and unfolded proteins in vitro, these data suggested that activation of Ire1 is regulated by two steps. In the first step, BiP dissociation from Ire1 leads to its cluster formation, and in the second step, direct interaction of unfolded proteins with the core region induces the orientation of cytosolic domain of Ire, resulting in the full activation of Ire1.
We also analyzed the role of novel ER transmembrane protein, DNAJB12, which belongs to Hsp40 DnaJ protein family and locates in the ER membrane. Overexpression of DNAJB12 accelerates the degradation of CFTR (Cystic fibrosis transmembrane conductance regulator) by ERAD, while the knock down of DNAJB12 increases the formation and maturation of CFTR.

Report

(6 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (25 results)

All 2007 2006 2005 2004 Other

All Journal Article (14 results) (of which Peer Reviewed: 3 results) Presentation (2 results) Book (2 results) Remarks (1 results) Publications (6 results)

  • [Journal Article] Two regulatory steps of ER-stress sensor Ire1 involving its cluster formation and binding to unfolded proteins.2007

    • Author(s)
      Kimata, Y.
    • Journal Title

      Journal of Cell Biology 179

      Pages: 75-86

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Two regulatory steps of ER-stress sensor Irel involving its cluster formation and binding to unfolded proteins.2007

    • Author(s)
      Kimata, Y.
    • Journal Title

      Journal of Cell Biology Vol. 179

      Pages: 75-86

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Two regulatory steps of ER-stress sensor Irel involving its cluster formation and binding to unfolded proteins.2007

    • Author(s)
      Kimata, Y.
    • Journal Title

      J.Cell Biol. 179

      Pages: 75-86

    • Related Report
      2006 Annual Research Report
  • [Journal Article] How transmembrane proteins sense endoplasmic reticulum stress.2007

    • Author(s)
      Kohno, K.
    • Journal Title

      Antioxid. Redox Signal. (In press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Yeast unfolded protein response pathway regulates expression of genes for anti-oxidative stress and for cell surface proteins.2006

    • Author(s)
      Y.Kimata
    • Journal Title

      Genes Cells 11

      Pages: 59-69

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Saccharomyces cerevisiae Rotlp is an ER-localized membrane protein that may function with BiP/Kar2p in protein folding.2006

    • Author(s)
      M.Takeuchi
    • Journal Title

      J. Biochem. 139(in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] An essential dimer-forming subregion of the endoplasmic reticulum stress sensor Ire1.2005

    • Author(s)
      D.Oikawa
    • Journal Title

      Biochem. J. 391

      Pages: 135-142

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 小胞体ストレス感知機構2005

    • Author(s)
      及川大輔
    • Journal Title

      実験医学 23

      Pages: 2327-2332

    • Related Report
      2005 Annual Research Report
  • [Journal Article] A role for BiP as an adjustor for the endoplasmic reticulumstress-sensing protein Irel.2004

    • Author(s)
      Kimata, Y.
    • Journal Title

      Journal of Cell Biology 167

      Pages: 445-456

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A transgenic mouse model for monitoring endoplasmic reticulum stress.2004

    • Author(s)
      Iwawaki, T.
    • Journal Title

      Nature Medicine 10

      Pages: 98-102

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] A role for BiP as an adjustor for the endoplasmic reticulum stress-sensing protein Irel.2004

    • Author(s)
      Kimata, Y.
    • Journal Title

      Journal of Cell Biology Vol. 167

      Pages: 445-456

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A transgenic mouse model for monit oring endoplasmic reticulum stress.2004

    • Author(s)
      Iwawaki, T.
    • Journal Title

      Nature Medicine Vol. 10

      Pages: 98-102

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A role for BiP as an adjustor for the endoplasmic reticulum stress-sensing protein IRE12004

    • Author(s)
      Kimata, Y.
    • Journal Title

      Journal of Cell Biology 167

      Pages: 445-456

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 小胞体ストレス感知機構2004

    • Author(s)
      木俣行雄
    • Journal Title

      蛋白質核酸酵素 49

      Pages: 998-1001

    • Related Report
      2004 Annual Research Report
  • [Presentation] The ER stress-sensory mechanism by transmembrane protein Irel.2006

    • Author(s)
      Kohno, K.
    • Organizer
      Cold Spring Harbor meeting. Molecular chaperones and the heat shock response.
    • Place of Presentation
      Cold Spring Harbor, NY, USA
    • Year and Date
      2006-05-05
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Presentation] The ER stress-sensory mechanism by transmembrane protein Irel.2006

    • Author(s)
      Kohno, K.
    • Organizer
      Cold Spring Harbor Meeting Molecular chaperones and the heat shock response
    • Place of Presentation
      Cold Spring Harbor, NY, USA
    • Year and Date
      2006-05-05
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 改訂版細胞生物学2007

    • Author(s)
      森 正敬
    • Total Pages
      264
    • Publisher
      放送大学教育振興会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] Cell Biology (Second edition)2007

    • Author(s)
      Mori, M.
    • Total Pages
      264
    • Publisher
      The Society for the Promotion of the University of the Air
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Remarks] 「研究成果報告書概要(和文)」より

    • URL

      http://bsw3.naist.jp/kouno/index.html

    • Related Report
      2006 Final Research Report Summary
  • [Publications] Kimata, Y: "Genetic evidence for a role of BiP/Kar2 that regulates Ire1 in response to accumulation of unfolded proteins."Molecular Biology of the Cell. 14. 2559-2569 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Iwawaki, T.: "A transgenic mouse model for monitoring endoplasmic reticulum stress."Nature Medicine. 10. 98-102 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kimata, Y.: "Genetic evidence for a role of BiP/Kar2 that regulates Ire1 in response to accumulation of unfolded proteins"Mol. Biol. Cell. 14(in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hosoda, A.: "JPDI, a novel endoplasmic reticulum-resident protein containing both a BiP-interacting J domain and thioredoxin-like motif"J. Biol. Chem.. 278. 2669-2676 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Higashio, H.: "A genetic link between the unfolded protein response and vesicle formation from the endoplasmic reticulum"Biochem. Biophys. Res. Commun.. 296. 568-574 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Okushima, Y.: "Isolation and characterization of a putative transducer of endoplasmic reticulum stress in Oryza sativa"Plant Cell Physiol.. 43. 532-539 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2018-03-28  

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