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Discovery of new DNA polymorphic markers and those applications to forensic medicine and humah genetics.

Research Project

Project/Area Number 14207022
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionUniversity of Fukui (2004-2005)
福井医科大学 (2002-2003)

Principal Investigator

MATSUKI Takasumi  University of Fukui, Faculty of Medicine, Dept.Forensic Medicine and Human Genetics, Professor, 医学部, 教授 (10126617)

Co-Investigator(Kenkyū-buntansha) IIDA Reiko  University of Fukui, Faculty of Medicine, Dept.Forensic Medicine and Human Genetics, Assist.Prof, 医学部, 助手 (40139788)
TAKATSUKA Hisakazu  University of Fukui, Faculty of Medicine, Dept.Forensic Medicine and Human Genetics, Assist.Prof, 医学部, 助手 (40242490)
Project Period (FY) 2002 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥41,730,000 (Direct Cost: ¥32,100,000、Indirect Cost: ¥9,630,000)
Fiscal Year 2005: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2004: ¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2003: ¥12,870,000 (Direct Cost: ¥9,900,000、Indirect Cost: ¥2,970,000)
Fiscal Year 2002: ¥20,410,000 (Direct Cost: ¥15,700,000、Indirect Cost: ¥4,710,000)
KeywordsDXS10011 / Yfm1 / DYS441 / DYS442 / DYS443 / DYS444 / Mpv17-like protein / mitochondrial DNA / 遺伝子 / 社会医学 / 遺伝子多型 / Y-STR / 年齢依存性マーカー / ミトコンドリアDNA / DYS441〜DYS445 / 陳旧・混合資料 / deoxyribonuclease I / ミトコンドリアDNA定量 / マウス脳 / M-LP(Mpv17-like protein) / DYS445 / DNA多型 / Multiplex PCR
Research Abstract

1. Development and application of DNA polymorphic markers
We collected 869 chromosome data on our developed marker DXS10011, and found three new mutants.
Our developed DNA marker Yfm1 was localized on long arm of Y chromosome as a multi-copy polymorphic marker.
New five short tandem repeats markers on Y chromosome (DYS441, DYS442, DYS443, DYS444, DYS445) were found and developed multiplex PCR method. The multiplex PCR method for these STR markers was useful for forensic materials like old samples or mixed samples, and applicable on the distinction of the race from Japanese, white American and African American.
2. Development of age related markers for forensic medicine
We found new and functionally unknown gene named as M-LP (Mpv17-like protein) on mouse kidney and spleen by differential display method. The M-LP gene was expressed as age dependent manner, and possibly regulated activities and gene expressions of antioxidant enzymes from experiments of the M-LP gene expressions in COS-7 cells.
We developed a new method for the estimation of mitochondrial DNA (mtDNA) amounts on mouse organs. Amounts of mtDNA in bone marrow, spleen and lung were relatively low, and relatively high in heart and skeletal muscles. Amounts of mtDNA, translational products of mtDNA and protein expressions of mtDNA showed gradual increase according to aging in heart, lung, kidney, spleen and skeletal muscles.

Report

(5 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (54 results)

All 2006 2005 2004 2003 2002 Other

All Journal Article (29 results) Book (13 results) Publications (12 results)

  • [Journal Article] Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.2006

    • Author(s)
      Iida R.et al.
    • Journal Title

      Biochem Biophys Res Commun. 344(3)

      Pages: 948-954

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.2006

    • Author(s)
      Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
    • Journal Title

      Biochem Biophys Res Commun 344(3)

      Pages: 948-954

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quantitative change in mitochondrial DNA content in various mouse tissues during aging.2005

    • Author(s)
      Masuyama M. et al.
    • Journal Title

      Biochem Biophys Acta. 1723

      Pages: 302-308

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Improvement of a multiplex PCR system for DYS441, DYS442, DYS443, DYS444 and DYS445, and a population study in 340 Japanese males.2005

    • Author(s)
      Ogata Y. et al.
    • Journal Title

      Legal Med. 7

      Pages: 183-189

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel alternative spliced Mpv17-like protein isoform localizes in cytosol and is expressed in a kidney-specific and adult-specific manner.2005

    • Author(s)
      Iida R.et al.
    • Journal Title

      Exp Cell Res. 302

      Pages: 22-30

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quantitative change in mitochondrial DNA content in various mouse tissues during aging.2005

    • Author(s)
      Masuyama M, Iida R, Takatsuka H, Yasuda T, Matsuki T.
    • Journal Title

      Biochem Biophys Acta 1723

      Pages: 302-308

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Improvement of a multiplex PCR system for DYS441, DYS442, DYS443, DYS444 and DYS445, and a population study in 340 Japanese males.2005

    • Author(s)
      Ogata Y, Yamaba T, Sawazaki K,.Iida R, Tsubota E, Ueki M, Takatsuka H, Matsuki T, Yasuda T, Kishi K
    • Journal Title

      Legal Med 7

      Pages: 183-189

    • NAID

      10027261063

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel alternative spliced Mpv17-like protein isoform localizes in cytosol and is expressed in a kidney-specific and adult-specific manner.2005

    • Author(s)
      Iida R, Yasuda T, Tsubota E, Takatsuka H, Masuyama M, Matsuki T, Kishi K
    • Journal Title

      Exp Cell Res 302

      Pages: 22-30

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Quantitative change in mitochondrial DNA content in various mouse tissues during aging.2005

    • Author(s)
      Masuyama M.et al.
    • Journal Title

      Biochem.Biophys.Acta 1723

      Pages: 302-308

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Improvement of a multiplex PCR system for DYS441, DYS442, DYS443, DYS444 and DYS445, and a population study in 340 Japanese males.2005

    • Author(s)
      Ogata Y.et al.
    • Journal Title

      Legal Med. 7

      Pages: 183-189

    • Related Report
      2005 Annual Research Report
  • [Journal Article] A novel alternative spliced Mpv17-like protein isoform localizes in cytosol and is expressed in a kidney-specific and adult-specific manner.2005

    • Author(s)
      Iida R.et al.
    • Journal Title

      Exp.Cell.Res. 302

      Pages: 22-30

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Identification, characterization and forensic application of novel Y-STRs.2005

    • Author(s)
      Iida R., Kishi K.
    • Journal Title

      Legal Med 7

      Pages: 255-258

    • NAID

      10027261370

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Y染色体のSTR6座位の法医学への応用2005

    • Author(s)
      松木 孝澄 他
    • Journal Title

      日本法医学雑誌 59

      Pages: 68-68

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Improvement of a multiplex PCR system for DYS441, DYS442, DYS443, DYS444 and DYS445, and a population study in 340 Japanese males.2005

    • Author(s)
      Ogata Y. et al.
    • Journal Title

      Legal Medicine 7(印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Quantitative change in mitochondrial DNA content in various mouse tissues during aging.2005

    • Author(s)
      Masuyama M. et al.
    • Journal Title

      Biochem.Biophys.Acta(General Subj.) (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] A novel 56-bp variable tandem repeat polymorphism in the human deoxyribonuclease I gene and its population data.2004

    • Author(s)
      Yasuda T. et al.
    • Journal Title

      Legal Med 6

      Pages: 242-245

    • Related Report
      2004 Annual Research Report
  • [Journal Article] M-LP, Mpv17-like protein, has a peroxisomal membrane targeting signal comprising a transmembrane domain and apositively charged loop and up-regulates expression of the manganese superoxide dismutase gene.2003

    • Author(s)
      Iida R.et al.
    • Journal Title

      J Biol Chem. 278(8)

      Pages: 6301-6306

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Screening of the early growth response 2 gene in Japanese patients with Charcot-Marie-Tooth disease Type 1.2003

    • Author(s)
      Numakura C. et al.
    • Journal Title

      J Neurological Sciences 210(1-2)

      Pages: 61-64

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel multiplex PCR system consisting of Y-STRs DYS441, DYS442, DYS443, DYS444 and DYS445.2003

    • Author(s)
      Iida R.et al.
    • Journal Title

      J Forensic Sci. 48(5)

      Pages: 1088-1090

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] DXS10011 : a hypervariable TTTC/GAAA repeat marker on human chromosome Xq27-q28.2003

    • Author(s)
      Matsuki T, Sawazaki K, Tsubota E, Iida R
    • Journal Title

      Progress in Forensic Genetics, International Congress Series 1239. ((Ed) Brinkmann B, Carracedo A) (Elsevier, Amsterdam) 9

      Pages: 363-366

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Structure of three mutations in DXS10011 locus.2003

    • Author(s)
      Sawazaki K, Matsuki T, Tsubota E, Iida R, Takatsuka H, Masuyama M, Yamaba T
    • Journal Title

      DNA Polymorphism. ((Ed) Japanese Society for DNA Polymophism Research) (Toyoshoten, Tokyo) vol.11

      Pages: 102-104

    • NAID

      10013995500

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] M-LP, Mpv17-like protein, has a peroxisomal membrane targeting signal comprising a transmembrane domain and a positively charged loop and up-regulates expression of the manganese superoxide dismutase gene.2003

    • Author(s)
      Iida R, Yasuda T, Tsubota T, Takatsuka T, Masuyama M, Matsuki T, Kishi K
    • Journal Title

      J Biol Chem 278(8)

      Pages: 6301-6306

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Screening of the early growth response 2 gene in Japanese patients with Charcot- Marie-Tooth disease Type 1.2003

    • Author(s)
      Numakura C, Shirahata E, Yamashita S, Kanai M, Kijima K, Matsuki T, Hayasaka K
    • Journal Title

      J Neurological Sciences 210(1-2)

      Pages: 61-64

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel multiplex PCR system consisting of Y- STRs DYS441, DYS442, DYS443, DYS444 and DYS445.2003

    • Author(s)
      Iida R, Sawazaki K, Ikeda H, Miyamoto T, Tsubota E, Takatsuka H, Masuyama M, Matsuki T, Yasuda T, Kishi K
    • Journal Title

      J Forensic Sci 48(5)

      Pages: 1088-1090

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Five age-dependently expressed genes in mouse brain revealed by the fluorescence differential display-PCR technique.2002

    • Author(s)
      Iida R.et al.
    • Journal Title

      Exp Geronto. 37(8-9)

      Pages: 1121-1126

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Characterization and haplotype analysis of the polymorphic Y-STRs DYS443, DYS444 and DYS445 in a Japanese Population.2002

    • Author(s)
      Iida R.et al.
    • Journal Title

      Int J Legal Med. 116(3)

      Pages: 191-194

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Yfm1 : a polymorphic multicopy marker on human Y chromosome.2002

    • Author(s)
      Matsuki T, Tsubota E, Iida R, Kuroki Y, Nakahori Y
    • Journal Title

      DNA Polymorphism ((Ed) Japanese Society for DNA Polymophism Research) (Toyoshoten, Tokyo) vol.10.

      Pages: 173-175

    • NAID

      10013994961

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Characterization and haplotype analysis of the polymorphic Y-STRs DYS443, DYS444 and DYS445 in a Japanese population.2002

    • Author(s)
      Iida R, Tsubota E, Sawazaki K, Masuyama M, Matsuki T, Yasuda T, Kishi K
    • Journal Title

      Int J Legal Med 116(3)

      Pages: 191-194

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Five age-dependently expressed genes in mouse brain revealed by the fluorescence differential display-PCR technique.2002

    • Author(s)
      Iida R, Yasuda T, Tsubota E, Takatsuka H, Masuyama M, Matsuki T, Kishi K
    • Journal Title

      Exp Gerontol 37(8-9)

      Pages: 1121-1126

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第14巻2006

    • Author(s)
      飯田礼子 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第14巻2006

    • Author(s)
      飯田 礼子 他
    • Publisher
      東洋書店(印刷中)
    • Related Report
      2005 Annual Research Report
  • [Book] DNA多型第13巻2005

    • Author(s)
      小形泰宏 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第13巻2005

    • Author(s)
      安田 年博 他
    • Publisher
      DNA多型学会(印刷中)
    • Related Report
      2004 Annual Research Report
  • [Book] DNA多型第13巻2005

    • Author(s)
      小形 泰宏 他
    • Publisher
      DNA多型学会(印刷中)
    • Related Report
      2004 Annual Research Report
  • [Book] DNA多型第12巻2004

    • Author(s)
      坪田悦子 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第12巻2004

    • Author(s)
      坪田 悦子 他
    • Publisher
      DNA多型学会
    • Related Report
      2004 Annual Research Report
  • [Book] DNA多型第12巻2004

    • Author(s)
      安田 年博 他
    • Publisher
      DNA多型学会
    • Related Report
      2004 Annual Research Report
  • [Book] Progress in Forensic Genetics 9 (International Congress Series 1239)2003

    • Author(s)
      Matsuki T. et al.
    • Publisher
      Elsevier
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第11巻2003

    • Author(s)
      澤崎一三 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第11巻2003

    • Author(s)
      飯田礼子 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第10巻2002

    • Author(s)
      飯田礼子 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] DNA多型第10巻2002

    • Author(s)
      松木孝澄 他
    • Publisher
      東洋書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] Iida R.et al.: "A novel multiplex PCR system consisting of Y-STRs DYS441, DYS442, DYS443, DYS444 and DYS445"J Forensic Sci. 48. 1088-1090 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Iida R.et al.: "M-LP, Mpv17-like protein, has a peroxisomal membrane targeting signal comprising a transmembrane domain and a positively charged loop and up-regulaies expressin of the manganese superoxide dismutase gene"J Biol Chem. 278. 6301-6306 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 増山みか 他: "リアルタイムPCR法によるミトコンドリアDNA定量法の開発"日法医誌. 57. 83 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Matsuki T. et al.: "Progress in Forensic Genetics 9 (International Congress Series 1239)"ELSEVIER. 4(363-366) (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 澤崎一三 他: "DNA多型第11巻"DNA多型学会. 3(102-104) (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 飯田礼子 他: "DNA多型第11巻"DNA多型学会. 5(113-117) (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 松木 孝澄 ほか: "Y染色体多型マーカーDYS441,DYS442,DYS443,DYS444及びDYS445の性状とハブロタイプ解析"日本人類遺伝学会第47回大会抄録集. 136 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 松木 孝澄 ほか: "DXS10011型変異型3例の構造"日本DNA多型学会第11回学術集会抄録集. 84 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Iida R et al.: "Characterization and haplotype analysis of the polymorphic Y-STRs DYS443,DYS444 and DYS445 in a Japanese population"Int J Legal Med. 116(3). 191-194 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 松木 孝澄 ほか: "ヒトY染色体の新規多型マーカー5種の性状"日本医誌. 56(1). 97 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 飯田 礼子 ほか: "DNA多型 第10巻"日本DNA多型学会. 160-163 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 松木 孝澄 ほか: "DNA多型 第10巻"日本DNA多型学会. 173-175 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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