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Mechanistsic Studies on the Catalase Reactions: Introduction of Catalase Activity into Heme Proteins.

Research Project

Project/Area Number 14209019
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field 広領域
Research InstitutionNagoya University

Principal Investigator

WATANABE Yoshihito  Graduate School of Science, Department of Chemistry, Professor, 大学院理学研究科, 教授 (10201245)

Co-Investigator(Kenkyū-buntansha) NAKAJIMA Hiroshi  Graduate School of Science, Department of Chemistry, Associate Professor, 大学院理学研究科, 助教授 (00283151)
上野 隆史  名古屋大学, 物質科学国際研究センター, 助手 (70332179)
Project Period (FY) 2002 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥45,500,000 (Direct Cost: ¥35,000,000、Indirect Cost: ¥10,500,000)
Fiscal Year 2005: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
Fiscal Year 2004: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
Fiscal Year 2003: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
Fiscal Year 2002: ¥20,930,000 (Direct Cost: ¥16,100,000、Indirect Cost: ¥4,830,000)
Keywordscatalase / myoglobin / heme / high valeent / oxidation / 西洋ワサビペルオキシダーゼ / P450BSβ / 西洋わさびペルオキシダーゼ
Research Abstract

The catalase reaction has been studied in detail by using myoglobin (Mb) mutants. Compound I of Mb mutants (Mb-I), a ferryl species (Fe^<IV>=O) paired with a porphyrin radical cation, is readily prepared by the reaction with a nearly stoichiometric amount of m-chloroperbenzoic acid (mCPBA). Upon the addition of H_2O_2 to an Mb-I solution, Mb-1 is reduced back to the ferric state without forming any intermediates. This indicates that Mb-I is capable of performing two-electron oxidation of H_2O_2 (catalatic reaction). GC-MS analysis of the evolved O2 from a 50:50 mixture of H_218O_2/H_2^<16>O_2 solution containing H64D or F43H/H64L Mb showed the formation of 18O2 (m/e=36) and 16O2 (m/e = 32) but not ^<16>O^<18>O (m/e = 34). This implies that O2 is formed by two electron oxidation of H_2O_2 without breaking the O-O bond. Deuterium isotope effects on the catalatic reactions of Mb mutants and catalase suggest that the catalatic reactions of Micrococcus lysodeikticus Catalase (MLC) and F43H/H64L Mb proceed via an ionic mechanism with a small isotope effect of less than 4.0, since the distal histidine residue is located at a proper position to act as a general acid-base catalyst for the ionic reaction. In contrast, other Mb mutants such as H64X (X: A, S, and D) and L29H/H64L Mb oxidize H_2O_2 via a radical mechanism in which a hydrogen atom is abstracted by Mb-I with a large isotope effect in a range of 10 to 29, due to a lack of the general acid-base catalyst

Report

(5 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (50 results)

All 2005 2004 Other

All Journal Article (30 results) Book (1 results) Publications (19 results)

  • [Journal Article] Monooxygenation of an Aromatic Ring by F43W/H64D/V68I Myoglobin Mutant and Hydrogen Peroxide2005

    • Author(s)
      T.D.Pfister, T.Ohki, T.Ueno, I.Hara, S.Adachi, Y.Makino, N.Ueyama, Y.Lu, Y.Watanabe
    • Journal Title

      J. Biol. Chem. 280

      Pages: 12858-12866

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Coordinated Design of Cofactor and Active Site Structure in Development of Nnew Protein Catalysts2005

    • Author(s)
      T.Ueno, T.Koshiyama, M.Ohashi, K.Kondo, M.Kono, A.Suzuki, T.Yamane, Y.Watanabe
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 6556-6562

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Reversible and regioselective Reaction of La@C62 with Cyclepentadiene2005

    • Author(s)
      Y.Maed, J.Miyashita, T.Hasegawa, T.Wakahara, T.Tsuchiya, T.Nakahodo, T.Akasaka, N.Mizorogi, K.Kobayashi, S.Nagase, T.Kato, N.Ban, H.Nakajima, Y.Watanabe
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 12190-12191

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Structural and Spectroscopic Characterization of (μ-Hydroxo or μ-oxo)(μ-Peroxo)diiron(III) Complexes : Models for Peroxo Intermediates of Non-Heme Diiron Proteins2005

    • Author(s)
      X.Zhang, H.Furutachi, S.Fujinami, S.Nagatomo, Y.Maeda, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 826-827

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Reversible O-O Bond Cleavage and Formation of a Peroxo Moiety of a Peroxocarbonate Ligand Mediated by an Iron(III) Complex2005

    • Author(s)
      H.Furutachi, K.Hashimoto, S.Nagatomo, T.Endo, S.Fujinami, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 4550-4551

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Watanabe, Monooxygenation of an Aromatic Ring by F43W/H64D/V681 Myoglobin Mutant and Hydrogen Peroxide.2005

    • Author(s)
      T.D.Pfister, T.Ohki, T.Ucno, I.Hara, S.Adachi, Y.Makino, N.Ueyama, Y.Lu, Y.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 12858-12866

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Coordinated Design of Cofactor and Active Site Structures in Development of Nnew Protein Catalysts.2005

    • Author(s)
      T.Ueno, T.Koshiyama, M.Ohashi, K.Kondo, M.Kono, A.Suzuki, T.Yamane, Y.Watanabe
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 6556-6562

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Reversible and Regioselective Reaction of La@C62 with Cyclopentadiene.2005

    • Author(s)
      Y.Maed, J.Miyashit, T.Hasegawa, T.Wakahara, T.Tsuchiya, T.Nakahodo, T.Akasaka, N.Mizorogi, K.Kobayashi, S.Nagase, T.Kato, N.Ban, H.Nakajima, Y.Watanabe
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 12190-12191

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Structural and Spectroscopic Characterization of (μ-Hydroxo or μ-Oxo)(μ-Peroxo)diiron(111) Complexes : Models for Peroxo Intermediates of Non-Heme Diiron Proteins.2005

    • Author(s)
      X.Zhang, H.Furutachi, S.Fujinami, S.Nagatomo, Y.Maeda, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 826-827

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Reversible O-O Bond Cleavage and Formation of a Peroxo Moiety of a Peroxocarbonate Ligand Mediated by an Iron(1ll) Complex.2005

    • Author(s)
      H.Furutachi, K.Hashimoto, S.Nagatomo, T.Endo, S.Fujinami, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 4550-4551

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Functionalization of Myoglobin.2005

    • Author(s)
      Y.Watanabe, T.Hayashi
    • Journal Title

      in Progress in Inorganic Chemistry.(Wiley-Interscience)

      Pages: 449-493

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Monooxygenation of an Aromatic Ring by F43W/H64D/V68I Myoglobin Mutant and Hydrogen Peroxide2005

    • Author(s)
      T.D.Pfister, T.Ohki, T.Ueno, I.Hara, S.Adachi, Y.Makino, N.Ueyama, Y.Lu, Y.Watanabe
    • Journal Title

      J.Biol.Chem. 280

      Pages: 12858-12866

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Reversible and Regioselective Reaction of La@C62 with Cyclopentadiene2005

    • Author(s)
      Y.Maed, J.Miyashit, T.Hasegawa, T.Wakahara, T.Tsuchiya, T.Kato, N.Ban, H.Nakajima, Y.Watanabe
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 12190-12191

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Coordinated Design of Cofactor and Active Site Structures in Development of New protein Catalysts2005

    • Author(s)
      T.Ueno, T.Koshiyama, M.Ohashi, K.Kondo, M.Kono, A.Suzuki, T.Yamane, Y.Watanabe
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 6556-6562

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structural and Spectroscopic Characterization of(μ-Hydroxo orμ-Oxo)(μ-Peroxo)diiron(III)Complexes : Models for Peroxo Intermediates of Non-Heme Diiron Proteins2005

    • Author(s)
      X.Zhang, H.Furutachi, S.Fujinami, S.Nagatomo, Y.Maeda, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 826-827

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Reversible O-O Bond Cleavage and Formation of a Peroxo Moiety of a Peroxocarbonate Ligand Mediated by an Iron(III)Complex2005

    • Author(s)
      H.Furutachi, K.Fujinami, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 4550-4551

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structural and Spectroscopic Characterization of (μ-Hydroxo or μ-Oxo)(μ-peroxo)diiron (III) Complexes : Models for Peroxo Intermediates of Non-Heme Diiron Proteins2005

    • Author(s)
      X.Zhang, H.Furutachi, S.Fujinami, S.Nagatomo, Y.Maeda, Y.Watanabe, T.Kitagawa, M.Suzuki
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 826-827

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Monooxygenation of an Aromatic Ring by F43W/H64D/V68I Myoglobin Mutant and Hydrogen Peroxide2005

    • Author(s)
      T.D.Pfister, T.Ohki, T.Ueno, I.Hara, S.Adachi, Y.Makino, N.Ueyama, Y.Lu, Y.Watanabe
    • Journal Title

      J.Biol.Chem. 280(印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Size Selective Olefin Hydrogenation by a Pd Nanocluster Provided in the Apo-Ferritin Cage2004

    • Author(s)
      T.Ueno, M.Suzuki, T.Goto, T.Matsumoto, K.Nagayama, Y.Watanabe
    • Journal Title

      Angew.Chem.Int.Ed. 43

      Pages: 2527-2530

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Crystal Structures of Artificial Metalloproteins2004

    • Author(s)
      T.Ueno, M.Ohashi, M.Kono, K.Kondo, A.Suzuki, T.Yamane, Y.Watanabe
    • Journal Title

      Inorg.Chem. 43

      Pages: 2852-2858

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Hybridization of Modified-Heme Reconstitution and Distal Histidine Mutation to Functionalize Sperm Whale Myoglobin2004

    • Author(s)
      H.Sato, T.Hayashi, T.Ando, Y.Hisaeda, T.Ueno, Y.Watanabe
    • Journal Title

      J.Am.Chem.Soc. 126

      Pages: 436-437

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Mechanistic Studies of the Isomerization of Peroxynitrite to Nitrate Catalyzed by Distal Histidine Metmyoglobin Mutants2004

    • Author(s)
      S.Herold, S.Kalinga, T.Matsui, Y.Watanabe
    • Journal Title

      J.Am.Chem.Soc. 126

      Pages: 6945-6955

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Interaction of Plastocyanin with Oligopeptides : Effect of Lysine Distribution within the Peptide2004

    • Author(s)
      S.Hirota, H.Okumura, S.Arie, K.Tanaka, M.Shionoya, T.Takabe, N.Funasaki, Y.Watanabe
    • Journal Title

      J.Inorg.Biochem. 98

      Pages: 849-855

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Catalase Reaction by Myoglobin Mutants and Native Catalase2004

    • Author(s)
      S.Kato, T.Ueno, S.Fukuzumi, Y.Watanabe
    • Journal Title

      J.Biol.Chem. 279

      Pages: 52376-52381

    • Related Report
      2004 Annual Research Report
  • [Journal Article] pH-Selective Synthesis and Structures of Alkynyl, Acyl, and Ketonyl Intermediates in Anti-Markovnikov and Markovnikov Hydrations of a Terminal Alkyne with a Water-Soluble Iridium Aqua Complex in Water2004

    • Author(s)
      S.Ogo, K.Uehara, T.Abura, Y.Watanabe, S.Fukuzumi
    • Journal Title

      J.Am.Chem.Soc. 126

      Pages: 16520-16527

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular Engineering of Cytochrome P450 and Myoglobin for Selective Oxygenations2004

    • Author(s)
      T.Ueno, T.Ohki, Y.Watanabe
    • Journal Title

      J.Por.Phthal. 8

      Pages: 279-289

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Why do Nitrogenases Waste Electrons by Evolving Dihydrogen?2004

    • Author(s)
      S.Ogo, B.Kure, H.Nakai, Y.Watanabe, S.Fukuzumi
    • Journal Title

      Appl.Organometal.Chem. 18

      Pages: 589-594

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 金属酵素による小分子の活性化2004

    • Author(s)
      城 宜嗣, 渡辺 芳人
    • Journal Title

      生化学 76

      Pages: 429-439

    • Related Report
      2004 Annual Research Report
  • [Journal Article] ミオグロビン骨格を利用した人工ヘム酵素の創成2004

    • Author(s)
      渡辺 芳人
    • Journal Title

      触媒 46

      Pages: 268-273

    • NAID

      10013449997

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 蛋白質空間を利用した物質返還-ヘム酵素を中心とした金属酵素の分子設計2004

    • Author(s)
      渡辺 芳人
    • Journal Title

      蛋白質・核酸・酵素 49

      Pages: 2253-2259

    • Related Report
      2004 Annual Research Report
  • [Book] Functionalization of Myoglobin In Progress in Inorganic Chemistry2005

    • Author(s)
      Y.Watanabe, T.Hayashi
    • Total Pages
      43
    • Publisher
      Wiley-Interscience
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Publications] T.Abura, S.Ogo, Y.Watanabe, S.Fukuzumi: "Isolation and Crystal Structure of Water-Soluble Iridium Hydride. Robust and Highly Active Catalyst for Acid-Catalyzed Transfer Hydrogenations of Carbonyl Compounds in Acidic Media"J.Am.Chem.Soc. 125. 4149-4154 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Fukuzumi, K.Shimoosako, T.Suenobu, Y.Watanabe: "Mechanisms of Hydrogen-, Oxygen-, and Electron-Transfer Reactions of Cumylperoxy Radical"J.Am.Chem.Soc. 125. 9074-9082 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Furutachi, M.Murayama, A.Shiohara, S.Yamazaki, S.Fujinami, A.Uehara, M.Suzuki, S.Ogo, Y.Watanabe, Y.Maeda: "Regioselective Hydroxylation of the Xylyl Linker in a Diiron(III) Complex having a carboxylate-Rich Ligand with H2O2"J.Chem.Soc., Chem.Commun.. 1900-1901 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Yang, T.Matsui, S.Ozaki, S.Kato, T.Ueno, G.N.Phillips, Jr., S.Fukuzumi, Y.Watanabe: "Molecular Engineering of Myoglobin : Influence of Residue 68 on the Rate and the Enantioselectivity of Oxidation Reactions Catalayzed by H64D/V68X Myoglobin"Biochemistry. 42. 10174-10181 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Sato, T.Hayashi, T.Ando, Y.Hisaeda, T.Ueno, Y.Watanabe: "Hybridization of Modified-Heme Reconstitition and Distal Histidine Mutation to Functionalize Sperm Whale Myoglobin"J.Am.Chem.Soc.. 126. 436-437 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Ueno, M.Suzuki, T.Goto, T.Matsumoto, K.Nagayama, Y.Watanabe: "Size Selective Olefin Hydrogenation by a Pd Nanocluster Provided in the Apo-Ferritin Cage"Angew.Chem.Int.Ed.. 43(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Ueno, M.Ohashi, M.Kono, K.Kondo, A.Suzuki, T.Yamane, Y.Watanabe: "Crystal Structures of Artificial Metalloproteins"Inorg.Chem.. 43(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Watanabe, T.Ueno: "Introduction of P450, peroxidase, and catalase Activities into Myoglobin by Site-Dorected Mutagenesis : Diverse Reactivity of Compound I"Bull.Chem.Soc.Jpn. 76. 1309-1322 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 渡辺芳人: "P450の分子生物学(分担執筆)"講談社サイエンティフィク. 255 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Watanabe: "Constraction of Heme Enzymes : Four Approaches"Curr. Opin. Chem. Biol.. 6. 208-216 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Watanabe: "Rational Molecular Design of a Catalytic Site : Engineering of Catalytic Functions to the Myoglobin Active Site Framework"Ind. J. Chem.. 41. 86-87 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] A.Wada, S.Ogo, S.Nagatomo, T.Kitagawa, Y.Watanabe, K.Jitsukawa, H.Masuda: "Reactivity of Hydrogen peroxide Bound to a Mononuclear Non-Heme iron Site"Inorg. Chem.. 41. 616-618 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] K.Hashimoto, S.Nagatomo, S.Fujinami, H.Furutachi, S.Ogo, M.Suzuki, A.Uehara, Y.Maeda, Y.Watanabe, T.Kitagawa: "A New Mononuclear Iron(III) Complex Containing a Peroxocarbonate Ligand"Angew. Chem. Int. Ed.. 41. 1201-1205 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Ogo, T.Abura, Y.Watanabe: "pH-Dependent Transfer Hydrogenation of ketones with HCOONa as a Hydrogen Donor Promoted by (η^6-C_6Me_6)Ru Complexes"Organometallics. 21. 2964-2969 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] R.Yamahara, S.Ogo, H.Masuda, Y.Watanabe: "(Catecholata)iron(III) Complexes : Structural and Functional Models for the Catechol-Bound iron(III) Form of Catechol Dioxygenase"J. Inorg. Biochem.. 88. 284-294 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Nakai, S.Ogo, Y.Watanabe: "pH-Dependent Cross-Coupling reactions of water-Soluble organic halides with organoboron Compounds Catalyzed by the organometallic Aqua Complex [(SCS)Pd^<II>(H_2O)]^+ (SCS=C_6H_3-2,6-(CH_2SBut)_2)"Organometallics. 21. 1674-1678 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Ogo, R.Yamahara, M.Roach, T.Suenobu, M.Aki, T.Ogura, T.Kitagawa, H.Masuda, S.Fukuzumi, Y.Watanabe: "Structural and Spectroscopic Features of a cis (Hydroxo)-FeIII-(Carboxylato) Configuration as an Active Site Model for Lipoxygenases"Inorg. Chem.. 41. 5513-5530 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.Abura, S.Ogo, Y.Watanabe, S.Fukuzumi: "Isolation and Crystal Structure of Water-Soluble Iridium Hydride. Robust and Highly Active Catalyst for Acid-Catalyzed Transfer Hydrogenations of Carbonyl Compounds in Acidic Media"J. Am. Chem. Soc.. 125(印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Ohashi, T.Koshiyama, T.Ueno, M.Yanase, H.Fujii, Y.Watanabe: "Isolation and Crystal Structure of Water-Soluble Iridium Hydride. Preparation of Artificial Metalloenzymes by Insertion of Chromium (III)Schiff Base Complexes into Apomyoglobin Mutants"Angew. Chem. Int. Ed.,. 42. 1005-1008 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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