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Molecular epidemiological study on emerging enteric infections in Asia

Research Project

Project/Area Number 14256004
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Bacteriology (including Mycology)
Research InstitutionKyoto University

Principal Investigator

NISHIBUCHI Mitsuaki  Kyoto University, Center for Southeast Asian Studies, Professor, 東南アジア研究所, 教授 (50189304)

Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥33,410,000 (Direct Cost: ¥25,700,000、Indirect Cost: ¥7,710,000)
Fiscal Year 2004: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2003: ¥7,800,000 (Direct Cost: ¥6,000,000、Indirect Cost: ¥1,800,000)
Fiscal Year 2002: ¥22,100,000 (Direct Cost: ¥17,000,000、Indirect Cost: ¥5,100,000)
KeywordsAsia / Molecular epidemiology / Cholera / Vibrio parahaemolyticus / Enterohemorrhagic Escherichia coli O157 / 新型腸炎ビブリオ / O139型コレラ菌 / MLST法 / DNAフィンガープリント / ベンガル / バングラディッシュ / 新興感染症 / 世界的大流行 / コレラ菌
Research Abstract

We studied the DNA fingerprints of new pandemic strains of Vibrio parahaemolyticus isolated in Thailand and Vietnam by using the pulsed field gel electrophoresis(PFGE) method. The results indicated that strains harbored in molluscan bivalves are responsible for infection in Thailand and that clear transition of O3:K6 serotype to O1:K25,etc. occurred in Vietnam. The nucleotide sequences of 11 genes in 60 pandemic strains representing the isolates in various Asian countries were combined and analyzed. The result indicated that O3:K6,O4:K68, and O1:KUT strains are phylogenetically related and possible ancestral strains of the pandemic strains were found.
Of the 20 ctx^+ Vibrio cholerae strains isolated from the seafoods in Malaysia 15 strains belonged to the new serotype (O139). These strains and ctx^+ V.cholerae strains isolated in India and Bangladesh and from international travelers were subjected to the PFGE-dendrogram analysis. The phylogenetic relationship among these strains suggested that Malaysian O139 strains were introduced from the Bengal area in two separate occasions. The nucleotide sequences of five genes of 79 strains of V.cholerae including the above strains were determined and analyzed by a multilocus sequence typing approach. The result supported the phylogenetic relationship of the strains obtained by the PFGE method.
Our study on Escherichia coli O157 suggested this organism is widely distributed in Asian environment. However, considerable number of the environmental strains produced very little amount of Stx2. This was due at least in part to the change in the DNA sequence around the Q gene. This genetic change and the fact that very few patients infected by E.coli O157 are reported in Asian countries appear to be related.

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (55 results)

All 2005 2004 2003 2002 Other

All Journal Article (45 results) Publications (10 results)

  • [Journal Article] Characterization of new O3:K6 strains and phylogenetically related strains of Vibrio parahaemolyticus isolated in Taiwan and other countries.2005

    • Author(s)
      Wong, H.C., et al.
    • Journal Title

      J.Appl.Microbiol. 98・3

      Pages: 572-580

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] The promoter region rather than its downstream inverted repeat sequence is responsible for low-level transcription of the thermostable direct hemolysin-related hemolysin (trh) gene of Vibrio parahaemolyticus.2005

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      J.Bacteriol. 48・4

      Pages: 319-927

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of new O3:K6 strains and phylogenetically related strains of Vibrio parahaemolyticus isolated in Taiwan and other countries.2005

    • Author(s)
      Wong, H.C., et al.
    • Journal Title

      J.Appl.Microbiol. 98(3)

      Pages: 572-580

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The promoter region rather than its downstream inverted repeat sequence is responsible for low-level transcription of the thermostable direct hemolysin-related hemolysin (trh) gene of Vibrio parahaemolyticus.2005

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      J.Bacteriol. 48(4)

      Pages: 319-327

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The promoter region rather than its downstream inverted repeat sequence is responsible for low-level transcription of the thermostable direct hemolysin-elated hemolysin (trh) gene of Vibrio parahaemolyticus.2005

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      J.Bacteriol. 48・4

      Pages: 319-327

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Infection by a new clone of Vibrio parahaemolyticus : an infectious disease that emerged in Asia and spread to a world wide pandemic2004

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      Ecological Destruction, Health, and Development : Advancing Asian Paradigms. (H.Furukawa, M.Nishibuchi, Y.Kono, and Y.Kaida (ed)) (Kyoto University Press/Trans Pacific Press, Kyoto)

      Pages: 251-263

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phenotypic and genotypic characteristics of ctx^+ strains of Vibrio cholerae isolated from seafood in Malaysia and the significance of the strains in epidemiology.2004

    • Author(s)
      Chen, C.-H., et al.
    • Journal Title

      Appl.Environ.Microbiol. 70・4

      Pages: 1964-1972

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Prevalence of potentially pathogenic Vibrio species in the seafood marketed in Malaysia.2004

    • Author(s)
      Elhadi, N., et al.
    • Journal Title

      J.Food Prot. 67・7

      Pages: 1469-1475

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Emergence and serovar transition of Vibrio parahaemolyticus pandemic strains isolated during a diarrhea outbreak in Vietnam between 1997 and 1999.2004

    • Author(s)
      Chowdhury, A.et al.
    • Journal Title

      Microbiol.Immunol. 48・4

      Pages: 319-327

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of pathogenic Vibrio parahaemolyticus isolates from clinical sources in Spain and comparison with Asian and North American pandemic isolates.2004

    • Author(s)
      Martinez-Urtaza J, et al.
    • Journal Title

      J Clin Microbiol. 42・10

      Pages: 4672-4678

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh.2004

    • Author(s)
      Islam, M.S., et al.
    • Journal Title

      Can.J.Microbiol. 50・10

      Pages: 827-834

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Rapid detection of tdh and trh mRNAs of Vibrio parahaemolyticus by the transcription-reverse transcription concerted (TRC) method.2004

    • Author(s)
      Masuda, N., et al.
    • Journal Title

      J.Biosci.Bioeng. 98・4

      Pages: 236-243

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Rapid and specific detection of tdh, trh1, and trh2 mRNA of Vibrio parahaemolyticus using transcription-reverse transcription concerted (TRC) reaction with an automated system.2004

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      J.Clin.Microbiol. 42・9

      Pages: 236-243

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Infection by a new clone of Vibrio parahaemolyticus : an infectious disease that emerged in Asia and spread to a world wide pandemic.2004

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      Ecological Destruction, Health, and Development : Advancing Asian Paradigms(H.Furukawa, M.Nishibuchi, Y.Kono, Y. aida (ed))(Kyoto University Press/Trans Pacific Press, Kyoto)

      Pages: 251-263

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phenotypic and genotypic characteristics of ctx^+ strains of Vibrio cholerae isolated from seafood in Malaysia and the significance of the strains in epidemiology.2004

    • Author(s)
      Chen, C.-H., et al.
    • Journal Title

      Appl.Environ.Microbiol. 70(4)

      Pages: 1964-1972

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevalence of potentially pathogenic Vibrio species in the seafood marketed in Malaysia.2004

    • Author(s)
      Elhadi, N., et al.
    • Journal Title

      J.Food Prot. 67(7)

      Pages: 1469-1475

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Emergence and serovar transition of Vibrio parahaemolyticus pandemic strains isolated during a diarrheaoutbreak in Vietnam between 1997 and 1999.2004

    • Author(s)
      Chowdhury, A. et al.
    • Journal Title

      Microbiol.Immunol. 48(4)

      Pages: 319-327

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of pathogenic Vibrio parahaemolyticus isolates from clinical sources in Spain and comparison with Asian and North American pandemic isolates.2004

    • Author(s)
      Martinez-Urtaza J, et al.
    • Journal Title

      J Clin Microbiol. 42(10)

      Pages: 4672-4678

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Pandemic strains of O3:K6 Vibrio parahaemolyticus in the aquatic environment of Bangladesh.2004

    • Author(s)
      Islam, M.S., et al.
    • Journal Title

      Can.J.Microbiol. 50(10)

      Pages: 827-834

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Rapid detection of tdh and trh mRNAs of Vibrio parahaemolyticus by the transcription-reverse transcription concerted (TRC) method.2004

    • Author(s)
      Masuda, N., et al.
    • Journal Title

      J.Biosci.Bioeng. 98(4)

      Pages: 236-243

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Rapid and specific detection of tdh, trh1,and trh2 mRNA of Vibrio parahaemolyticus using transcription-reverse transcription concerted (TRC) reaction with an automated system.2004

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      J.Clin.Microbiol. 42(9)

      Pages: 236-243

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Emergence and serovar transition of Vibrio parahaemolyticus pandemic strains isolated during a diarrhea outbreak in Vietnam 1997 and 1999.2004

    • Author(s)
      Chowdhury, A. et al.
    • Journal Title

      Microbiol.Immunol. 48・4

      Pages: 319-327

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Characterization of pathogenic Vibrio parahaemolyticus isolates from clinical sources in Spain and comparison with Asian and North American pandemic isolates.2004

    • Author(s)
      Mertinez-Urtaza J, et al.
    • Journal Title

      J Clin Microbiol. 42・10

      Pages: 4672-4678

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Prevalence and serodiversity of the pandemic clone among the clinical strains of Vibrio parahaemolyticus isolated in southern Thailand2003

    • Author(s)
      Laohaprertthisan, V.et al.
    • Journal Title

      Epidemiol.Infect. 130

      Pages: 1-12

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Gene sequence analysis of seafood-borne Vibrio pathogens and its application.2003

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      Recent Advances in Marine Biotechnology Vol.10 Molecular Genetics of Marine Organisms. (Science Publishers, Inc., Enfield, New Hampshire, and Plymouth) 10

      Pages: 33-85

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vibrio parahaemolyticus2003

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      International Handbook of Foodborne Pathogens. (J.Bier and M.D.Miliotis (ed.)) (Marcel Dekker, Inc., New York.)

      Pages: 237-252

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 腸炎ビブリオ感染症:アジアで重要な海産物由来のビブリオ感染症2003

    • Author(s)
      西渕光昭
    • Journal Title

      日食微誌 20(4)

      Pages: 156-160

    • NAID

      10012189022

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The urease gene cluster of Vibrio parahaemolyticus does not influence the expression of the thermostable direct hemolysin (TDH) gene or the TDH-related hemolysin gene2003

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      Microbiol.Immunol. 47(3)

      Pages: 233-239

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Adaptive and inflammatory immune responses in patients infected with strains of Vibrio parahaemolyticus2003

    • Author(s)
      Qadri, F., et al.
    • Journal Title

      J.Infect.Dis. 187

      Pages: 1085-1096

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of polymerase chain reaction for detection of Vibrio parahaemolyticus associated with tropical seafoods and coastal environment2003

    • Author(s)
      Dileep, V., et al.
    • Journal Title

      Lett.Appl.Microbiol. 36

      Pages: 423-427

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vibrio parahaemolyticus O3:K6 inseafood and the coastal environment in Japan2003

    • Author(s)
      Hara-Kudo Y, et al.
    • Journal Title

      Appl.Environ.Microbiol. 69(7)

      Pages: 3883-3891

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Incidence of Salmonella spp.In raw vegetables in Selangor, Malaysia.2003

    • Author(s)
      Salleh, N.A., et al.
    • Journal Title

      Food Control 14

      Pages: 475-479

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Isolation and molecular characterization of Listeria monocytogenes and Listeria innocua from poultry meat.2003

    • Author(s)
      Lesley, M., et al.
    • Journal Title

      ASEAN Food Journal 12

      Pages: 89-102

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevalence and serodiversity of the pandemic clone among the clinical strains of Vibrio parahaemolyticus isolated in southern Thailand2003

    • Author(s)
      Laohaprertthisan, V. et al.
    • Journal Title

      Epidemiol.Infect. 130

      Pages: 1-12

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Gene sequence analysis of seafood-borne Vibrio pathogens and its application.2003

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      Recent Advances in Marine Biotechnology Vol.10 Molecular Genetics of Marine Organisms(Science Publishers, Inc., Enfield, New Hampshire, and Plymouth) 10

      Pages: 33-85

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vibrio parahaemolyticus2003

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      International Handbook of Foodborne Pathogens(J.Bier, M.D.Miliotis(ed.))(Marcel Dekker, Inc., New York)

      Pages: 237-252

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vibrio parahaemolyticus infection : an important seafood-derived vibrio infection in Asia (article in Japanese)2003

    • Author(s)
      Nishibuchi, M.
    • Journal Title

      Jpn.J.Food Microbiol. 20(4)

      Pages: 156-160

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The urease gene cluster of Vibrio parahaemolyticus does not influence the expression of the thermostable direct hemolysin(TDH) gene or the TDH-related hemolysin gene.2003

    • Author(s)
      Nakaguchi, Y., et al.
    • Journal Title

      Microbiol.Immunol. 47(3)

      Pages: 233-239

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Application of polymerase chain reaction for detection of Vibrio parahaemolyticus associated with tropical seafoods and coastal environment.2003

    • Author(s)
      Dileep, V., et al.
    • Journal Title

      Lett.Appl.Microbiol. 36

      Pages: 423-427

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vibrio parahaemolyticus O3:K6 inseafood and the coastal environment in Japan.2003

    • Author(s)
      Hara-Kudo Y, et al.
    • Journal Title

      Appl.Environ.Microbiol. 69(7)

      Pages: 3883-3891

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The toxR gene of Vibrio anguillarum-not a virulence regulator but a good tool for diagnosis.2003

    • Author(s)
      Okuda, J., et al.
    • Journal Title

      Fisheries Science 68

      Pages: 1109-1112

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Incidence of Salmonella spp. In raw vegetables in Selangor, Malaysia.2003

    • Author(s)
      Salleh, N.A., et al.
    • Journal Title

      Food Control. 14

      Pages: 475-479

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Clinical, epidemiologic, and socioeconomic analysis of an outbreak of Vibrio parahaemolyticus in Khanh Hoa province, Vietnam.2002

    • Author(s)
      Tuyet, D.T.et al.
    • Journal Title

      J.Infect.Dis. 186

      Pages: 1615-1620

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Intercalation activating fluorescence DNA probe and its application to homogenous quantification of a target sequence by isothermal sequence amplification in a closed vessel.2002

    • Author(s)
      Ishiguro, T., et al.
    • Journal Title

      Anal.Biochem. 314

      Pages: 77-86

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The toxR gene of Vibrio anguillarum : not a virulence regulator but a good tool for diagnosis.2002

    • Author(s)
      Okuda, J., et al.
    • Journal Title

      Fisheries Science 68

      Pages: 1109-1112

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Nishibuchi, M.: "Vibrio parahaemolyticus"In J.Bier and M.D.Miliotis(ed.), International Handbook of Foodborne Pathogens. Marcel Dekker, Inc., New York.. 237-252 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nishibuchi, M.: "Gene sequence analysis of seafood-borne Vibrio pathogens and its application."Recent Advances in Marine Biotechnology Vol.10 Molecular Genetics of Marine Organisms.Science Publishers, Inc., Enfield, New Hampshire, and Plymouth. 10. 33-85 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nishibuchi, M.: "Infection by a new clone of Vibrio parahaemolyticus : an infectious disease that emerged in Asia and spread to a world wide pandemic"In H.Furukawa, M.Nishibuchi, Y.Kono, Y.Kaida(ed), Ecological Destruction, Health, and Development : Advancing Asian Paradigms. Kyoto University Press/Trans Pacific Press, Kyoto. 251-263 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 西渕光昭: "腸炎ビブリオ感染症:アジアで重要な海産物由来のビブリオ感染症"日食微誌. 20(4). 156-160 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nakaguchi, Y., et al.: "The urease gene cluster of Vibrio parahaemolyticus does not influence the expression of the thermostable direct hemolysin (TDH) gene or the TDH-related hemolysin gene"Microbiol.Immunol.. 47(3). 233-239 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Qadri, F., et al.: "Adaptive and inflammatory immune responses in patients infected with strains of Vibrio parahaemolyticus"J.Infect.Dis.. 187. 1085-1096 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Dileep, V., et al.: "Application of polymerase chain reaction for detection of Vibrio parahaemolyticus associated with tropical seafoods and coastal environment"Lett.Appl.Microbiol.. 36. 423-427 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hara-Kudo Y, et al.: "Vibrio parahaemolyticus O3:K6 inseafood and the coastal environment in Japan"Appl.Environ.Microbiol.. 69(7). 3883-3891 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tuyet, D.T.et al.: "Clinical, epidemiologic, and socioeconomic analysis of an outbreak of Vibrio parahaemolyticus in Khanh Hoa province, Vietnam"J. Infect. Dis.. 186. 1615-1620 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Laohaprertthisan, V. et al.: "Prevalence and serodiversity of the pandemic clone among the clinical strains of Vibrio parahaemolyticus isolated in southern Thailand"Epidemiol. Infect.. 130. 1-12 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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