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Investigation on function and gene expression of multiple cellulolytic enzymes from filamentous fungi.

Research Project

Project/Area Number 14360094
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 林産学
Research InstitutionThe University of Tokyo

Principal Investigator

SAMEJIMA Masahiro  The University of Tokyo, Graduate School of Agricultural and Life Sciences, Professor (30162530)

Co-Investigator(Kenkyū-buntansha) IGARASHI Kiyohiko  The University of Tokyo, Graduate School of Agricultural and Life Sciences, Assistant Professor (80345181)
Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥16,800,000 (Direct Cost: ¥16,800,000)
Fiscal Year 2004: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 2003: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 2002: ¥12,600,000 (Direct Cost: ¥12,600,000)
KeywordsCellulose / Glycoside Hydrolase / Cellulase / Filamentous Fungi / Proteome / Bioinformatics / Phanerochaete chrysosporium / Gene Expression / 糖質関連酵素 / 糖分解酵素 / クローニング / キシラン / セロビオース脱水素酵素 / 担子菌 / β-グルコシダーゼ / Grifola frondosa
Research Abstract

Fungal system of cellulose degradation has been considered to consist of merely extracellular hydrolytic enzymes. In this concept, cellulose is hydrolyzed to cellobiose by the synergistic action of various cellulases. After that, cellobiose is considered to convert in glucose by extracellular beta-glucosidases (BGL) before uptake of it in fungi as an energy source. However, the white-rot fungus Phanerochaete chrysosporium produces the extracellular flavohemoenzyme, cellobiose dehydrogenase (CDH), during cellulose degradation. In this work, importance of CDH in fungal system of cellulose degradation has been aware from both enzymatic and genetic investigations. CDH oxidizes cellobiose to cellobionolactone. In the presence of CDH, therefore, the catalytic specificity of the extracellular beta-glucosidase (BGL) should be examined not only for cellobiose, but also for cellobionolactone. BGL can hydrolyze both cellobiose and cellobionolactone, but cellobionolactone is hydrolyzed much more s … More lowly than cellobiose. In addition, the catalytic efficiency of CDH for cellobiose is extremely higher than that of BGL, indicating that BGL cannot use cellobiose as a substrate in the presence of CDH. Moreover, the effects of cellobiose on transcriptional response of CDH and BGL encoding genes (cdh and bgl) indicate that cdh is up-regulated in cellobiose metabolism, but not bgl. From all these observations, it is concluded that the extracellular BGL does not directly participate in the enzymatic system of cellulose degradation by P. chrysosporium. Moreover, using genome information of P. chrysosporium disclosed by Joint Genome Institute in US DoE, proteomic analysis of proteins secreted in the extracellular culture solution of the fungus during cellulose degradation was performed and 12 different enzymes on 2D-gel electrophoresis have been identified. In addition, using the genome information, cDNA of a novel extracellular cytochrome b562 has been cloned and expressed in the yeast Pichia pastoris as recombinant protein. Less

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (22 results)

All 2005 2004 2003 Other

All Journal Article (16 results) Publications (6 results)

  • [Journal Article] Characterization of carbohydrate-binding cytochrome b562 from the white-rot fungus Phanerochaete chrysosporium : Evidence of novel redox networks in filamentous fungi2005

    • Author(s)
      M. Yoshida, K. lgarashi, M. Wada, S. Kaneko, N. Suzuki
    • Journal Title

      Applied and Environmental Microbiology 71

      Pages: 4548-4555

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of carbohydrate-binding cytochrome b562 from the white-rot fungus Phanerochaete chrysosporium. Evidence of novel redox networks in filamentous fungi2005

    • Author(s)
      M. Yoshida, K. Igarashi, M. Wada, S. Kaneko, N. Suzuki
    • Journal Title

      Applied and Environmental Microbiology 71

      Pages: 4548-4555

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Differential transcription of b-glucosidase and cellobiose dehydrogenase genes in cellulose degradation by the basidipmycete Phanerochaete chrysosporium2004

    • Author(s)
      M. Yoshida, K. lgarashi, R. Kawai, K. Aida, M. Samejima
    • Journal Title

      FEMS Microbiology Letters 235

      Pages: 177-182

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular cloning and characterization of cellobiose dehydrogenase from the brown-rot fungus Coniophora puteana2004

    • Author(s)
      T. Kajisa, M. Yoshida, K. lgarashi, A Katayama, T. Nishino, M. Samejima
    • Journal Title

      Journal of Bioscience and Bioengineering 98

      Pages: 57-63

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Kinetics of substrate transglycosylation by glycoside hydrolase family 3 glucan-1, 3-beta-glucosidase from the white-rot fungus Phanerochaete chrysosporium2004

    • Author(s)
      R. Kawai, K. lgarashi, T. lshii, M. Kitaoka, M. Samejima
    • Journal Title

      Carbohydrate Research 339

      Pages: 2851-2857

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Differential transcription of beta-glucosidase and cellobiose dehydrogenase genes in cellulose degradation by the basidiomycete Phanerochaete chrysosporium2004

    • Author(s)
      M. Yoshida, K. Igarashi, R. Kawai, K. Aida, M. Samejima
    • Journal Title

      FEMS Microbiology Letters 235

      Pages: 177-182

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular cloning and characterization of cellobiose dehydrogenase from the brown-rot fungus Coniophora puteana2004

    • Author(s)
      T. Kajisa, M. Yoshida, K. Igarashi, A Katayama, T. Nishino, M. Samejima
    • Journal Title

      Journal of Bioscience and Bioengineering 98

      Pages: 57-63

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Kinetics of substrate transglycosylation by glycoside hydrolase family 3 glucan-1,3-beta-glucosidase from the white-rot fungus Phanerochaete chrysosporium2004

    • Author(s)
      R. Kawai, K. Igarashi, T. Ishii, M. Kitaoka, M. Samejima
    • Journal Title

      Carbohydrate Research 339

      Pages: 2851-2857

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Differential transcription of b-glucosidase and cellobiose dehydrogenase genes in cellulose degradation by the basidiomycete Phanerochaete chrysosporium2004

    • Author(s)
      M.Yoshida, et al.
    • Journal Title

      FEMS Microbial.Lett. 235

      Pages: 177-182

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular cloning and characterization of cellobiose dehydrogenase from the brown-rot fungus Coniophora puteana2004

    • Author(s)
      T.Kajisa, et al.
    • Journal Title

      J, Biosci.Bioeng. 98

      Pages: 57-63

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Kinetics of substrate transglycosylation by glycoside hydrolase family 3 glucan-1,3-beta-glucosidase from the white-rot fungus Phanerochaete chrysosporium2004

    • Author(s)
      R.Kawai, et al.
    • Journal Title

      Carbohydr.Res. 339

      Pages: 2851-2857

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 糸状菌によるセルロース生分解機構とその関連酵素をとりまく最近の研究動向2004

    • Author(s)
      鮫島正浩, 五十嵐圭日子
    • Journal Title

      木材学会誌 50

      Pages: 359-367

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Production and characterization of recombinant Phanerochaete chrysosporium β-glucosidase in the Methylotrophic yeast Pichia pastoris2003

    • Author(s)
      R. Kawai, M. Yoshida, K. lgarashi, T. Ohira, H. Nagasawa, M. Samejima
    • Journal Title

      Bioscience Biotechnology and Biochemistry 67

      Pages: 1-7

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Family 3-β-glucosidase from cellulose-degrading culture of the white-rotfungus Phanerochaete chrysosporium is a glucan 1, 3-β-glucosidase2003

    • Author(s)
      K. lgarashi, T. Tani, R. Kawai, M. Samejima
    • Journal Title

      Journal of Bioscience and Bioengineering 95

      Pages: 572-576

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Production and characterization of recombinant Phanerochaete chrysosporium β-glucosidase in the Methylotrophic yeast Pichia pastoris2003

    • Author(s)
      R. Kawai, M. Yoshida, K. Igarashi, T. Ohira, H. Nagasawa, M. Samejima
    • Journal Title

      Bioscience Biotechnology and Biochemistry 67

      Pages: 1-7

    • NAID

      110002693941

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Family 3-β-glucosidase from cellulose-degrading culture of the white-rot fungus Phanerochaete chrysosporium is a glucan 1, 3-β-glucosidase2003

    • Author(s)
      K. lgarashi, T. Tani, R. Kawai, M. Samejima
    • Journal Title

      Journal of Bioscience and Bioengineering 95

      Pages: 572-576

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] R.Kawai et al.: "Production and characterization of recombinant Phanerochaete chrysosporium β-glucosidase in the Methylotrophic yeast Pichia pastoris"Bioscience Biotechnology and Biochemistry. 67(1). 1-7 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Igarashi et al.: "Family 3-β-glucosidase from cellulose-degrading culture of the white-rot fungus Phanerochaete chrysosporium is a glucan 1,3-β-glucosidase"Journal of Bioscience and Bioengineering. 95. 572-576 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Igarashi et al.: "Kinetics of inter-domain electron transfer in flavocytochrome cellobiose dehydrogenase from the white-rot fungus Phanerochaete chrysosponum"Biochemical Journal. 365. 521-526 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Yoshida et al.: "Molecular cloning and characterization of a cDNA encoding cellobiose dehydrogenase from the wood-rotting fungus Grifola frondosa"FEMS Microbiology Letters. 217. 225-230 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] R.Kawai et al.: "Production and characterization of recombinant Phanerochaete chrysosporium β-glucosidase in the Methylotrophic yeast Pichia pastoris"Bioscience Biotechnology and Biochemistry. 67(1). 1-7 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 鮫島正浩, 五十嵐圭日子: "酸化還元酵素が関与する白色木材腐朽菌のセルロース分解機構"化学と生物. 41(1). 22-26 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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