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An analysis of gene expression profile of osteosarcoma cells in the bone and peripheral blood with DNA microarray. -Identification of marker genes for osteosarcoma using hierarchical clustering algorithm. -

Research Project

Project/Area Number 14370456
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Orthopaedic surgery
Research InstitutionNIIGATA UNIVERSITY

Principal Investigator

HOTTA Tetsuo  NIIGATA UNIVERSITY, Medical and Dental Hospital, Associate Professor, 医歯学総合病院, 助教授 (00272815)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥5,800,000 (Direct Cost: ¥5,800,000)
Fiscal Year 2003: ¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 2002: ¥3,600,000 (Direct Cost: ¥3,600,000)
Keywordsosteosarcoma / DNA microarray / u-PA / SOD / DDR1 / p53 / cdk4 / mdm2 / DDRI / DNAマイクロアレイ / 遺伝子発現 / エストロゲン / プラスミノーゲン / オキシジェンフリーラジカル / ptk-3 / 末梢血
Research Abstract

DNA microarray-based analysis of mRNA expression of 5147 genes in bone tissue was performed. Differentially expressed genes were identified by hierarchical clustering and scatter plot analyses. Differential mRNA expression of four genes [collagen type 2 (COL2), extracellular superoxide dismutase (SOD), plasminogen activator (u-PA) and DDR1] were confirmed by reverse transcription polymerase chain reaction. Further, immunohistologically, u-PA was positive for chondrocytes and chondroclasts in the junction between cartilage and bone, implying its importance in resorption and remodeling of cartilaginous cartilage. DDR1 is upregulated by irradiation in osteosarcoma cells and is regulated by p53, which is one of most important tumor suppressor genes. Known function strongly suggest important roles for DDR1 genes in the tumorigenesis of osteosarcoma. We also identified cdk4 and mdm2 genes, which are cell cycle related genes and are regulated by p53 gene, are overexpressed in well-differentiated liposarcoma. These genes are potential marker for distinguish lipoma and well-differentiated liposarcoma.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] Hatano H, Sarkar G, Siegel HJ, et al.: "Identification of estrogen-regulated genes during fracture healing using DNA microarray"Jornal of Bone and Mineral Metabolism. In press. (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, Morita T, Ogose A, Hotta T, et al.: "Well-differentiated liposarcoma associated with benign lipoma"Anticancer Research. In press. (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, Ogose A, Hotta T, et al.: "Treatment of myxoid liposarcoma by marginal or intralesional resection combined with radiotherapy."Anticancer Research. 23. 3045-3049 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ogose A, Yazawa Y, Ueda T, Hotta T, et al.: "Alveolar soft part sarcoma in Japan : multi-institutional study of 57 patients from the Japanese Musculoskeletal Oncology Group."Oncology. 65. 7-13 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawashima H, Ogose A, Hayami T, Yamagiwa H, Hatano H, Hotta T, et al.: "Effect of dexamethasone on growth inhibition and chondrogenic maturation of human chondrosarcoma."Journal of Orthopedic Science. 8. 341-345 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawashima H, Ogose A, Yoshizawa T, Kuwano R, Hotta Y, Hotta T: "Expression of the coxsackievirus and adenovirus receptor in musculoskeletal tumors and mesenchymal tissues : efficacy of adenoviral gene therapy for osteosarcoma."Cancer Science. 94. 70-75 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, Sarkar G, Siegel HJ, et al.: "Identification of estrogen-regulated genes during fracture healing using DNA microarray."Journal of Bone and Mineral Metabolism. (in press). (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, Morita T, Ogose A, Hotta T, et al.: "Well-differentiated liposarcoma associated with benign lipoma."Anticancer Research. (in press). (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, Ogose A, Hotta T, et al.: "Treatment of myxoid liposarcoma by marginal or intralesional resection combined with radiotherapy."Anticancer Research. 23. 3045-9 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ogose A, Yazawa Y, Ueda T, Hotta T, et al.: "Alveolar soft part sarcoma in Japan : multi-institutional study of 57 patients from the Japanese Musculoskeletal Oncology Group."Oncology. 65. 7-13 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawashima H, Ogose A, Hayami T, Yamagiwa H, Hatano H, Hotta T, et al.: "Effect of dexamethasone on growth inhibition and chondrogenic maturation of human chondrosarcoma.."Journal of Orthopedic Science. 8. 341-5 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawashima H, Ogose A, Yoshizawa T, Kuwano R, Hotta Y, Hotta T: "Expression of the coxsackievirus and adenovirus receptor in musculoskeletal tumors and mesenchymal tissues : efficacy of adenoviral gene therapy for osteosarcoma.."Cancer Science. 94. 70-5 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hatano H, et al.: "Ideintification of estrogen-regulated genes during fracture healing using DNA microarray"Jornal of Bone and Mineral Metabolism. (In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hatano H, et al.: "Well-differentiated liposarcoma associated with benign lipoma"Anticancer Research. (In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hatano H, et al.: "Treatment of myxoid liposarcoma by marginal or intralesional resection combined with radiotherapy"Anticancer Research. 23. 3045-3049 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ogose A, et al.: "Alveolar soft part sarcoma in Japan : multi-institutional study 57 patients from the Japanese Musculoskeletal Oncology Group"Oncology. 65. 7-13 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawashima H, et al.: "Effect of dexamethasone on growth inhibition and chondrogenic maturation of human chondrosarcoma"Jpurnal of Orthopedic Science. 8. 341-345 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawashima H, et al.: "Expression of the coxsackievirus and adenovirus receptor in musculoskeletal tumors and mesenchymal tissues : efficacy of adenoviral gene therapy for osteosarcoma"Cancer Science. 94. 70-75 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 畠野宏史他: "骨折治癒過程におけるエストロゲン関連遺伝子群の検索"日本整形外科学会雑誌. 76・8. S1136 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 堀田哲夫他: "悪性骨軟部腫瘍に対する縮小手術"関節外科. 21. 1080-1086 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 堀田哲夫他: "術後照射を併用した軟部肉腫縮小手術"臨床整形外科. 37. 571-576 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 堀田哲夫他: "仙骨脊索腫の治療成績"整形外科. 53. 1125-1131 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hatano H., et al.: "Development of a cellular model to study alternative splicing of type II collagen gene"Journal of Orthopedic Research. 20. 516-519 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ogose A., et al.: "Fibrolipomatous hamartoma in the feet : MR imaging and surgical treatment"Journal of Bone and Joint Surgery. 84-A. 432-436 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Takahashi HE., et al.: "Operative Treatment of Pelvic Tumors"Springer-Verlag Tokyo. 216 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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