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Analysis of disease genes for skeletal dysplasias

Research Project

Project/Area Number 14370476
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Orthopaedic surgery
Research InstitutionRIKEN

Principal Investigator

IKEGAWA Shiro  RIKEN, Laboratory for Bone and Joint Diseases, Laboratory Head, 変形性関節症関連遺伝子研究チーム, チームリーダー (30272496)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥13,300,000 (Direct Cost: ¥13,300,000)
Fiscal Year 2003: ¥6,400,000 (Direct Cost: ¥6,400,000)
Fiscal Year 2002: ¥6,900,000 (Direct Cost: ¥6,900,000)
Keywordsgenetic diagnosis / skeletal dysplasia / bone and joint disease / mutation / pseudoachondroplasia / MED / COMP / COL2A1 / pseudochondroplasia / 疾患遺伝子 / 遺伝子解析 / 遺伝子
Research Abstract

To establish a system for DNA diagnosis of skeletal dysplasias, genetic disorders of bone and cartilage, and gain insight for their pathogenesis, I performed genetic analysis of skeletal dysplasias and obtained the following results.
1.Direct sequencing is not always reliable. Allele specific PCR amplification could occur due to sequence identity between a PCR primer and an amplicon.
2.We identified 3 novel EBP mutations in X-linked dominant chondrodysplasia punctata and found skewed X-chromosome inactivation causes intra-familial phenotypic variation.
(1)We identified 9 novel COMP mutations in pseudoachondroplasia and MED (multiple epiphyseal dysplasia) and genotype-phenotype association.
(2)We identified for the first time that platyspondylic skeletal dysplasia, Torrance type is caused by COL2A1 mutation.
(3)We found novel mutations in the following disease:
(4)COL2A 1 in hypochondrogenesis、 spondyloepiphyseal dysplasia congenita、 Kniest dysplasia、Stickler syndrome and spondyloepiphyseal dysplasia tarda.
(5)MAIN3 and COL9A3 in MED.
(6)RMRP in Cartilage-Hair ].
(7)TGFB1 in Camurati-Engelmann disease.
(8)SBDS in Shwachman-Diamond syndrome.
3.We found circulating COMP is decreased in pseudoachondroplasia and multiple epiphyseal dysplasia patients carrying COMP mutations.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (40 results)

All Other

All Publications (40 results)

  • [Publications] Nishimura Gen: "Spondyloepimetaphyseal dysplasia with joint laxity leptodactylic form : Clinical course and phenotypic variations in four patients."American Journal of Medical Genetics. 117A(2). 147-153 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Matsuyama Juntaro: "A pair of sibs with tibial hemimelia horn to phenotypically normal parents."Journal of Human Genetics. 48(4). 173-176 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura Gen: "Spondyloepiphyseal dysplasia Maroteaux type : Report of three patients from two families and exclusion of type II collagen defects."American Journal of Medical Genetics. 120A(4). 498-502 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nakashima Eiji: "S. RMRP Mutations in Japanese Patients with Cartilage-Hair Hypoplasia."American Journal of Medical Genetics. 123A(3). 253-256 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikegawa Shiro: "Allele specific PCR amplification due to sequence identify between a PCR primer and an amplicon : Is direct sequencing so reliable?"Human Genetics. 110(6). 606-608 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura Gen: "Spondyloepimetaphyseal dysplasia with joint laxity leptodactylic form : Clinical course and phenotypic variations in four patients."American Journal of Medical Genetics. 107(1). 5-11 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawaji Hiroyuki: "Autosomal dominant precocious osteoarthropathy due to a mutation of the cartilage oligomeric matrix protein(COMP)gene : further expansion of the phenotypic variations of COMP"Skeletal Radiology. 31(12). 703-707 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shirahama Shuya: "Skewed X-chromosome inactivation causes intra-familial phenotypic variation of an EBP mutation in a family with X-linked dominant chondrodysplasia punctata."Human Genetics. 112(1). 78-83 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mabuchi Akihiko: "Novel types of COMP mutations and genotype-phenotype association in pseudoachondroplasia and multiple epiphyseal dysplasia."Human Genetics. 112(1). 84-90 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nicola Brunetti-Pierri: "A new patient with Lowry-Wood syndrome with mild phenotype."American Journal of Medical Genetics. 118A(1). 68-70 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura Gen: "Identification of COL2A1 mutations in platyspondylic skeletal dysplasia, Torrance type."Journal of Medical genetics. 41(1). 75-79 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nakashima Eiji: "Novel SBDS mutations caused by gene conversion in Japanese patients with Shwachman-Diamond syndrome."Human Genetics. 114(4). 345-348 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kinoshita Akira: "TGFB1 mutations in four new families with Camurati-Engelmann disease : Confirmation of independently arising LAP-domain-specific mutations."American Journal of Medical Genetics. (In press). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mabuchi Akihiko: "COMP is decreased in pseudoachondroplasia and multiple epiphyseal dysplasia patients carrying COM mutations."American Journal of Medical Genetics. (In press). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikegawa Shiro: "Correspondence-Hypomorphic alleles within the EBP gene cause a henotype quite different from Conradi-Hunermann-Happle syndrome."American Journal of Medical Genetics. (In press). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikegawa S, Mabuchi A, Ogawa M, Ikeda T.: "Allele specific PCR amplification due to sequence identity between a PCR primer and an amplicon : Is direct sequencing so reliable?"Hum Genet. 110(6). 606-608 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura C, Nishimura H, Tanaka Y, Makita Y, Ikegawa S, Ghadami M, Kinoshita A, Niikawa N.: "Camurati-Engelmann disease type II. Progressive diaphyseal dysplasia with striations of the bones."Am J Med Genet. 107(1). 5-11 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kawaji H, Nishimura G, Watanabe S, Mabuchi A, Ikeda T, Ohashi H, Sasaki A, Sano T, Ikegawa S.: "Autosomal dominant precocious osteoarthropathy due to a mutation of the cartilage oligomeric matrix protein (COMP) gene : further expansion of the phenotypic variations of COMP defects."Skeletal Radiol. 31(12). 730-737 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shirahama S, Miyahara A, Kitoh H, Honda A, Kawase A, Yamada K, Mabuchi A, Kura H, Yokoyama Y, Tsutsumi M, Ikeda T, Tanaka N, Nishimura G, Ohashi H, Ikegawa S.: "Skewed X-chromosome inactivation causes intra-familial phenotypic variation of an EBP mutation in a family with X-linked dominant chondrodysplasia punctata."Hum Genet. 112(1). 78-83 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mabuchi A, Manabe N, Haga N, Kitoh H, Ikeda T, Kawaji H, Tamai K, Hamada J, Nakamura S, Brunetti-Pierri N, Kimizuka M, Takatori Y, Nakamura K, Nishimura G, Ohashi H, Ikegawa S.: "Novel types of COMP mutations and genotype-phenotype associtation in pseudoachondroplasia and multiple epiphyseal dysplasia."Hum Genet. 112(1). 84-90 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura G, Honma T, Shiihara T, Manabe N, Nakajima E, Adachi M, Mikawa M, Fukushima Y, Ikegawa S.: "Spondyloepimetaphyseal dysplasia with joint laxity leptodactylic form : Clinical course and phenotypic variations in four patients."Am J Med Genet. 117A(2). 147-153 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Brunetti-Pierri N, De Brasi D, Ikegawa S, Camera G, Andria G, Sebastio G.: "A new patient with Lowry-Wood syndrome with mild phenotype."Am J Med Genet. 118A(1). 68-70 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikeda T, Matsuyama J, Mabuchi A, Zhang J, Iida A, Kimizuka M, Ikegawa S.: "A pair of sibs with tibial hemimelia born to phenotypically normal parents."J Hum Genet. 48(4). 173-176 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura G, Kizu R, Kijima Y, Sakai K, Kawaguchi Y, Kimura T, Matsushita I, Shirahama S, Ikeda T, Ikegawa S, Hasegawa T.: "Spondyloepiphyseal dysplasia Maroteaux type : Report of three patients from two families and exclusion of type II collagen defects."Am J Med Genet. 120A(4). 498-502 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nakashima E, Mabuchi A, Kashimada K, Onishi, T, Zhang J, Ohashi H, Nishimura G, Ikegawa S.: "RMRP Mutations in Japanese Patients with Cartilage-Hair Hypoplasia."Am J Med Genet. 123A(3). 253-256 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura G, Nakashima B, Mabuchi A, Shimamoto K, Shimamoto T, Shimao Y, Nagai T, Yamaguchi T, Kosaki R, Ohashi H, Makita Y, Ikegawa S.: "Identification of COL2A1 mutations in platyspondylic skeletal dysplasia, Torrance type."J Med Genet. 41(1). 75-79 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nakashima B, Mabuchi A, Makita, Ohashi H, Nishimura G, Ikegawa S.: "Novel SBDS Mutations Caused by Gene Conversion in Japanese Patients with Shwachman-Diamond Syndrome."Hum Genet. 114(4). 345-348 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kinoshita A, Shirahama 5, Miyahara S, Haga N, Namba A, Ueda H, Hayashi H, Seidel J, Fukumaki Y, Yoshiura K, Ikegawa S, Niikawa N.: "TGFBI mutations in four new families with Camurati-Engelmann disease : Confirmation of independently arising LAP-domain-specific mutations."Am J Med Genet. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mabuchi A, Momohara S, Haga N, Ohashi H, Takatori Y, Nishimura G, Ikegawa S.: "Circulating COMP is decreased in pseudoachondroplasia and multiple epiphyseal dysplasia patients carrying COMP mutations."Am J Med Genet. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikegawa S.: "Correspondence-Hypomorphic alleles within the EBP gene cause a phenotype quite different from Conradi-Hunermann-Happle syndrome."Am J Med Genet. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Nishimura Gen: "Spondyloepimetaphyseal dysplasia with joint laxity leptodactylic form : Clinical course and phenotypic variations in four patients."American Journal of Medical Genetics. 117A(2). 147-153 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Matsuyama Juntaro: "A pair of sibs with tibial hemimelia born to phenotypically normal parents."Journal of Human Genetics. 48(4). 173-176 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nishimura Gen: "Spondyloepiphyseal dysplasia Maroteaux type : Report of three patients from two families and exclusion of type II collagen defects."American Journal of Medical Genetics. 120A(4). 498-502 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ikegawa Shiro: "Genetic analysis of osteoarthritis : toward identification of its susceptibility genes."Journal of Orthopaedic Science. 8(5). 737-739 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nakashima Eiji: "S. RMRP Mutations in Japanese Patients with Cartilage-Hair Hypoplasia."American Journal of Medical Genetics. 123A(3). 253-256 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ikegawa Shiro: "Allele specific PCR amplification due to sequence identity between a PCR primer and an amplicon : Is direct sequencing so reliable?"Human Genetics. 110(6). 606-608 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ikeda Toshiyuki: "Identification and characterization of the human long form of Sox5 (L-SoX5) gene"Gene. 298(1). 59-68 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kawaji Hiroyuki: "Autosomal dominant precocious osteoarthropathy due to a mutation of the cartilage oligomeric matrix protein (COMP) gene : further expansion of the phenotypic variations of COMP defects"Skeletal Radiology. 12. 730-737 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shirahanma Shyuya: "Skewed X-chromosome inactivation causes intra-familial phenotypicvariation of an EBP mutation in a family with X-linked dominant chondrodysplasia punctata"Human Genetics. 112(1). 78-83 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Mabuchi Akihiko: "Novel types of COMP mutations and genotype-phenotype association in pseudoachondroplasia and multiple epiphyseal dysplasia"Human Genetics. 112(1). 84-90 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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