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Analysis of biomarker proteins for chemosensitivity by protein chip

Research Project

Project/Area Number 14370760
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 医薬分子機能学
Research InstitutionJapanese Foundation for Cancer Research

Principal Investigator

YAMORI Takao  Japanese Foundation for Cancer Research, Division of Molecular Pharmacology, Cancer Chemotherapy Center, Member and Chief, 癌化学療法センター・分子薬理部, 部長 (60200854)

Co-Investigator(Kenkyū-buntansha) ARIKUNI Hisashi  Japanese Foundation for Cancer Research, Division of Molecular Pharmacology, Cancer Chemotherapy Center, Director of Institute, 横浜研究所, 所長(研究職)
DAN Shingo  Japanese Foundation for Cancer Research, Division of Molecular Pharmacology, Cancer Chemotherapy Center, Member and Chief, Associate, 癌化学療法センター・分子薬理部, 研究員 (70332202)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥11,900,000 (Direct Cost: ¥11,900,000)
Fiscal Year 2003: ¥5,400,000 (Direct Cost: ¥5,400,000)
Fiscal Year 2002: ¥6,500,000 (Direct Cost: ¥6,500,000)
Keywordsbiomarker / tumor marker / chemosensitivity / protein expression / protein chip / proteomics / diagnosis and therapy / cancer chemotherapy / 抗癌剤感受性 / 抗がん剤感受性マーカー / サロゲートマーカー / プロテオーム / 創薬ターゲット / がん化学療法
Research Abstract

Discovery of new biomarkers for diagnosis and therapy of cancer is important We previously established a "cancer cell lines panel" consisting of 39 human cancer cell lines derived from 8 different organ types, such as lung, stomach, colon, breast and so on. We have investigated their drug sensitivities and gene expression profiles and integrated all the data into a database, from which we have been getting various unique information on the molecular pharmacology of cancer. In the present study, we investigated the protein expression profiles of the 39 cancer cell lines by SELDI Proteinchip System (Ciphergen) and analyzed new biomarkers. Followings are the summary of the results.
1.We found that a 11970 Da protein was expressed exclusively in colon cancer cell lines, and identified it as prothymosin α (PT-α). It is an acidic nuclear protein and suggested to be involved in apoptosis. However, its function is not known well.
2.We prepared anti PT a antibodies and immunohistochemically exami … More ned human colon cancer tissue. Then, adenoma expressed PT-α at a higher level than normal mucosa, and colon cancer tissue expressed it at an even higher level than adenoma This is the first observation indicating that PT-α is a new candidate of tumor marker. On the basis of this finding, we would like to validate PT α as a tumor marker by examining the larger number of colon cancer patients for its expression in the cancer tissue and in the blood. We also would like to analyze its function in colon cancer to examine whether it could be a molecular target of therapy.
3.To discover biomarkers for chemosensitiyity, we analyzed what alteration of protein expression profile occurs in cancer cells when exposed to anticancer drugs. NCI-H226 human lung cancer cells were exposed to 9 drugs, such as paclitaxel, cisplatin, and SN-38. Among various alterations, we recognized several proteins whose changes in the expression level were drug specific, which are the candidates of the biomarker for chemosensitivity. On he basis of this finding, we would like to extend our study to the identification and functional analysis of the candidate proteins and their validation.
Therefore, the protein chip analysis using the cancer cell lines panel is a useful methodology for discovering biomarkers, such as tumor marker and chemosensitivity markers. We would like to exploit it for development of diagnosis and therapy of cancer. Less

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] Yamori, T.: "Panel of human cancer cell lines provides valuable database for drug discovery and bioinformatics"Cancer Chemother Pharmacol. 52 Suppl 1. 74-79 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shiwa, M., Nishimura, Y., Arikuni, H., Kato, Y.: "Rapid discovery and identification of a tissue-specific tumor biomarker from 39 human cancer cell lines using the SELDI Protein Chip platform"Biochem Biophys Res Commun. 309. 18-25 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tanabe, M., Izumi, H., Ise, T., Higuchi, S., Yamori, T., Yasumoto, K., Kohno K.: "Activating transcription factor 4 increases the cisplatin resistance of human cancer cell lines"Cancer Res. 63. 8592-8595 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Dan, S., Yamori, T.et al.: "Identification of candidate predictive markers of anticancer drug sensitivity using a panel of human cancer cell lines"Cancer Sci. 94. 1074-1082 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sugiyam Y., Dan, S., Yamori, T.et al.: "A large-scale gene expression comparison of microdissected, small-sized endometrial cancers with or without Hyperplasia Matched to Same-Patient Normal Tissue"Clin Cancer Res. 9. 5589-5600 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hama, K., Aoki, J., Yamori, T.et al.: "Lysophosphatidic acid and autotaxin stimulate cell motility of neoplastic and Non-neoplastic Cells through LPA_1"J Biol Chem. 279. 17634-17639 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 矢守隆夫: "がん細胞パネルインフォーマティクス-分子標的治療薬探索と感受性診断への応用"The Japan Society of Drug delivery System. 9 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamori, T: "Panel of human cancer cell lines provides valuable database for drug discovery arid bioinformatics."Cancer Chemother Pharmacol. 52 Suppl 1. 74-79 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Shiwa, M., Nishimura, Y, Wakatabe, R, Fukawa, A., Alikuni, H., Ota, H., Kato, Y., Yarori, T: "Rapid discovery and identification of a tissue-specific tumor biomarker from 39 human cancer cell lines using the SELDI ProteinChip platform."Biochem Biophys Res Commun. 309. 18-25 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tanabe, M, Izumi, H., Ise, T., Higuchi, S., Yamori, T., Yasumoto, K., Kohno, K.: "Activating transcription factor 4 increases the cisplatin resistance of human cancer cell lines."Cancer Res. 63. 8592-8595 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Dan, S., Shirakawa, M., Mukai, Y, Yoshida, Y, Yamazaki, K, Kawaguchi, T, Matsuura, M., Nakamura, Y, Yamori, T: "Identification of candidate predictive markers of anticancer drug sensitivity using a panel of human cancer cell lines."Cancer Sci. 94. 1074-1082 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sugiyama, Y, Dan, S., Yoshida, Y., Akiyama, F., Sugiyama, K, Hirai, Y., Matsuura, M., Miyata, S., Ushijima, M., Hasumi, K., Yamori, T.: "A large-scale gene expression comparison of microdissected, small-sized endometrial cancers with or without hyperplasia matched to same-patient normal tissue."Clin Cancer Res. 9. 5589-5600 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hama, K, Aoki, J., Fukaya, M., Kishi, Y, Sakai, T., Suzuki, R, Ohta, H., Yamori, T., Watanabe, M., Chun, J., Arai, H.: "Lysophosphatidic acid and autotaxin stimulate cell motility of neoplastic and non-neoplastic cells through LPA1."J Biol Chem. 279. 17634-17639 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamori, T.: "Panel of human cancer cell lines provides valuable database for drug discovery and bioinformatics"Cancer Chemother Pharmacol. 52 Suppl1. 74-79 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shiwa, M., Nishimura, Y., Arikuni, H., Yamori T.et al.: "Rapid discovery and identification of a tissue-specific tumor biomarker from 39 human cancer cell lines using the SELDI ProteinChip platform"Biochem Biophys Res Commun. 309. 18-25 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tanabe, M., Izumi, H., Ise, T., Higuchi, S., Yamori, T., Yasumoto, K., Koh: "Activating transcription factor 4 increases the cisplatin resistance of human cancer cell lines"Cancer Res. 63. 8592-8595 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Dan, S., Yamazaki, Yamori, T.et al.: "Identification of candidate predictive markers of anticancer drug sensitivity using a panel of human cancer cell lines"Cancer Sci. 94. 1074-1082 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sugiyama, Y., Dan, S., Yamori, T., et al.: "A large-scale gene expression comparison of microdissected, small-sized endometrial cancers with or without hyperplasia matched to same-patient"Clin Cancer Res. 9. 5589-5600 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hama, K., Aoki, J., Yamori, T.et al.: "Lysophosphatidic acid and autotaxin stimulate cell motility of neoplastic and non-neoplastic cells through LPA1"J Biol Chem. 279. 17634-17639 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 矢守隆夫: "がん細胞パネルインフォーマティクス-分子標的治療薬探索と感受性診断への応用"The Japan Society of Drug delivery System. 9 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yang, L., Mashima, T., Yamori, T.et al.: "Predominant suppression of apoptosome by inhibitor of apoptosis protein in non-small cell lung cancer H460 cells : therapeutic effect of a novel polyarginine-conjugated Smac peptide"Cancer Res.. 63. 831-837 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Owa, T., Yamori T.et al.: "Structure and Gene Expression Relationship Study of Antitumor Sulfonamides Including N-[2-[(4-Hydroxyphenyl)amino]-3-pyridinyl]-4-methoxybenzenesulfonamide and N-(3-Chloro-7-indolvl)-1.4-benzenedisulfonamide"J Med Chem.. 45. 4913-4922 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Uesato, S., Yamori, T.et al.: "Novel histone deacetylase inhibitors : N-hydroxycarboxamides possessing a terminal bicyclic aryl group"Bioorg Med Chem Lett.. 12. 1347-1349 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Dan, S., Yamori T.et al.: "An integrated database of chemosensitivity to 55 anticancer drugs and gene expression profiles of 39 human cancer cell lines"Cancer Research.. 62. 1139-1147 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ueki, A., Shiwa M., Arikuni, H.et al.: "Intramolecular epitope spreading among anti-caspase-8 autoantibodies in patients with silicosis, systemic sclerosis and systemic lupus erthematosus, as well as in healthy individuals"Clin Exp lmmnol. 129. 556-561 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Tamamura, H., Arikuni, H., et al.: "Reduction of Peptide character of HIV Protease Inhibitors that Exhibit Nanomolar Potency against Muti-drug Resistant HIV-1 Strains"J.Med.Chem.

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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