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Mechanism of organelle targeting and topogenesis of membrane proteins

Research Project

Project/Area Number 14380294
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionUniversity of Hyogo (2004)
Kyushu University (2002-2003)

Principal Investigator

SAKAGUCHI Masao  University of Hyogo, Graduate School of Life Science, Professor, 大学院・生命理学研究科, 教授 (30205736)

Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥14,800,000 (Direct Cost: ¥14,800,000)
Fiscal Year 2004: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 2003: ¥5,000,000 (Direct Cost: ¥5,000,000)
Fiscal Year 2002: ¥5,500,000 (Direct Cost: ¥5,500,000)
KeywordsBiomembrane / Organelle / Membrane protein / Topology / signal sequence / Biosyntnesis / 膜蛋白質 / 小胞体 / ミトコンドリア / 膜透過 / 受容体
Research Abstract

In this research, based on our research background of membrane topogenesis and sorting, we have extensively examined whole topogenesis process of several typical membrane proteins into the endoplasmic reticulum membranes, including mechanism for all the transmembrane segments. The type I signal-anchor sequence, which translocates the N-terminal portion, mediates the translocation of N-domain much longer than had been assumed. For the translocation of the long N-domain, neither NTP's nor luminal hsp70 homologue, BiP, is required. Ribosome, however, plays critical function for the N-domain translocation. It is suggested to maintain the translocating chain at an appropriate position of the translocon. We also provided new evidences supporting our novel topogenic mode via which non-hydrophobic segment is forced to form transmembrane disposition by internal type I signal-anchor sequence. Furthermore, we extensively examined the mitochondrial targeting presequence which mediate the mitochondrial import of highly hydrophobic membrane proteins, ABC transporters and demonstrated the N-terminal 135 residues hydrophilic segment of ABC(B10) isoform is a membrane protein specific signal sequence that suppresses SRP-mediated ER targeting and mediate mitochondrial import. By the sequence the targeting mode of membrane proteins switches from co-translational ER translocation to the post-translational mitochondrial import. We also clarified topogeinc sequences of Tom22, mitochondrial outer membrane protein, and established experimental system for Tom40, by which Tom40 is over-expressed in E.coli, solubilized by denaturing reagent, purified, and renatured in vitro.

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (48 results)

All 2005 2004 2003 2002 Other

All Journal Article (36 results) Publications (12 results)

  • [Journal Article] The N-terminal region of the transmembrane domain of human erythrocyte band 3 : Residues critical for membrane insertion and transport activity2005

    • Author(s)
      Kanki, T., et al.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 5564-5573

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Switching the sorting mode of membrane proteins from co-translational ER targeting to post-translational mitochondrial import2005

    • Author(s)
      Miyazaki, E.et al.
    • Journal Title

      Mol.Biol.Cell 16

      Pages: 1788-1799

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Switching the sorting mode of membrane proteins from co-translational ER targeting to post-translational mitochondrial import2005

    • Author(s)
      Miyazaki, E., Kida, Y., Mihara, K., Sakaguchi, M.
    • Journal Title

      Mol.Biol.Cell 16

      Pages: 1788-1799

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Switching the sorting mode of membrane proteins from co-translational ER targeting to post-translational mitochondrial import2005

    • Author(s)
      Miyazaki, E.et al.
    • Journal Title

      Mol.Biol.Cell 16(in press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 1型シグナルアンカー配列による膜トポロジー形成の研究2004

    • Author(s)
      阪口 雅郎 ら
    • Journal Title

      蛋白質核酸酵素 49

      Pages: 899-902

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Targeting and assembly of rat mitochondrial translocase of outer membrane 22 (TOM22) into the TOM complex2004

    • Author(s)
      Nakamura, Y.et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 21223-21232

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Membrane-embedded C-terminal segment of rat mitochondrial TOM40 constitutes protein-conducting pore with enriched b-structure2004

    • Author(s)
      Suzuki, H.et al.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 50619-50629

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Topogenesis of NHE 12004

    • Author(s)
      Sato, Y.et al.
    • Journal Title

      Biochem.Biophys.Res.Commun. 324

      Pages: 2871-287

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Topogenesis of NHE1 : direct insertion of the membrane loop and sequestration of cryptic glycosylation and processing sites just after TM92004

    • Author(s)
      Sato, Y., Ariyoshi, N., Mihara, K., Sakaguchi, M.
    • Journal Title

      Biochem.Biophys.Res.Commun. 324

      Pages: 281-287

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Membrane-embedded C-terminal segment of rat mitochondrial TOM40 constitutes protein-conducting pore with enriched b-structure2004

    • Author(s)
      Suzuki, H., Kadowaki, T., Maeda, M., Sasaki, H., Nabekura, J., Sakaguchi, M., Mihara, K.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 50619-50629

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Targeting and assembly of rat mitochondrial translocase of outer membrane 22(TOM22) into the TOM complex2004

    • Author(s)
      Nakamura, Y., Suzuki, H., Sakaguchi, M., Mihara, K.
    • Journal Title

      J.Biol.Chem. 279

      Pages: 21223-21232

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 1型シグナルアンカー配列による膜トポロジー形成の研究2004

    • Author(s)
      阪口 雅郎ら
    • Journal Title

      蛋白質核酸酵素 49

      Pages: 899-902

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Topogenesis of NHE12004

    • Author(s)
      Sato, Y.et al.
    • Journal Title

      Biochem.Biophys.Res.Commun. 324

      Pages: 281-287

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Targeting and assembly of mitochondrial tail-anchored protein Tom5 to the TOM complex depend on a signal distinct from that of tail-anchored proteins dispersed in the membrane2003

    • Author(s)
      Horie, C., et al.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 41462-41471

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Topogenesis of two transmembrane type K+ channels, Kir 2.1 and Kcs A2003

    • Author(s)
      Umigai, N., et al.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 40373-40384

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular dissection of the contribution of negatively and positively charged residues in S2, S3, and S4 to the final membrane topology of the voltage sensor in the K+ channel, KAT12003

    • Author(s)
      Sato, Y., et al.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 13227-13234

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Requirement of negative residues, Asp 95 and Asp 105, in S2 on membrane integration of a voltage-dependent K+ channel, KAT12003

    • Author(s)
      Sato, Y., et al.
    • Journal Title

      Biosci.Biotechnol.Biochem. 67

      Pages: 923-926

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Targeting and assembly of mitochondrial tail-anchored protein Tom5 to the TOM complex depend on a signal distinct from that of tail-anchored proteins dispersed in the membrane2003

    • Author(s)
      Horie, C., Suzuki, H., Sakaguchi, M., Mihara, K.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 41462-41471

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Topogenesis of two transmembrane type K+ channels, Kir 2.1 and KcsA2003

    • Author(s)
      Umigai, N., Sato, Y., Mizutani, A., Utsumi, T., Sakaguchi, M., Uozumi, N.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 40373-40384

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular dissection of the contribution of negatively and positively charged residues in S2, S3, and S4 to the final membrane topology of the voltage sensor in the K+ channel, KAT12003

    • Author(s)
      Sato, Y., Sakaguchi, M., Goshima, S., Nakamura, T., Uozumi, N.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 13227-13234

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The N-terminal region of the transmembrane domain of human erythrocyte band 3 : Residues critical for membrane insertion and transport activity.2003

    • Author(s)
      Kanki, T., Young, M.T., Sakaguchi, M., Hamasaki, N., Tanner, M.J.A.
    • Journal Title

      J.Biol.Chem. 278

      Pages: 5564-5573

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Requierment of negative residues, Asp 95 and Asp 105, in S2 on membrane integration of a voltage-dependent K+ channel, KAT12003

    • Author(s)
      Sato, Y., Hosoo, Y., Sakaguchi, M., Uozumi, N.
    • Journal Title

      Biosci.Biotechnol.Biochem. 67

      Pages: 923-926

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The tenth membrane region of band 3 is initially exposed to the luminal side of the endoplasmic reticulum and then integrated into a partially folded band 3 intermediate2002

    • Author(s)
      Kanki, T., et al.
    • Journal Title

      Biochemistry 41

      Pages: 13973-13981

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Autonomous and Heteronomous Positioning of Transmembrane Segments in Multispanning Membrane Protein. (Mini Review)2002

    • Author(s)
      Sakaguchi, M.
    • Journal Title

      Biochem.Biophys.Res.Commun 296

      Pages: 1-4

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of the signal that directs the C-tail anchored proteins to the mammalian mitochondrial outer membrane2002

    • Author(s)
      Horie, C., et al.
    • Journal Title

      Mol.Biol.Cell 13

      Pages: 1615-1625

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Membrane topogenesis of the three amino-terminal transmembrane segments of glucose-6-phosphatase on endoplasmic reticulum2002

    • Author(s)
      Ukaji, K., et al.
    • Journal Title

      Biochem.Biophys.Res.Commun 292

      Pages: 153-160

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Integration of Shaker-typeK+ channel, KAT1 into the endoplasmic reticulum membrane : Synergistic insertion of voltage sensing segments, S3-S4 and independent insertion of pore-forming segments, S5-P-S62002

    • Author(s)
      Sato, Y., et al.
    • Journal Title

      Proc.Natl.Acad.Sci.USA 99

      Pages: 60-65

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 膜タンパク質のトポジェネシス-細胞内配置と膜内構造構築の研究2002

    • Author(s)
      阪口雅郎
    • Journal Title

      実験医学 20

      Pages: 2068-2074

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 生体膜タンパク質の膜内構造形成2002

    • Author(s)
      阪口雅郎
    • Journal Title

      表面 20

      Pages: 55-62

    • NAID

      40003279647

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] タンパク質の立体構造形成2002

    • Author(s)
      阪口雅郎
    • Journal Title

      パリティ 17

      Pages: 52-54

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] ミトコンドリア外膜における物質輸送系2002

    • Author(s)
      阪口雅郎
    • Journal Title

      日本臨床増刊

      Pages: 59-63

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The tenth membrane region of band 3 is initially exposed to the luminal side of the endoplasmic reticulum and then integrated into a partially folded band 3 intermediate.2002

    • Author(s)
      Kanki, T., Sakaguchi, M., Kitamura, A., Sato, T., Mihara, K., Hamasaki, N.
    • Journal Title

      Biochemistry 41

      Pages: 13973-13981

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Autonomous and Heteronomous Positioning of Transmembrane Segments in Multispanning Membrane Protein. (Mini Review)2002

    • Author(s)
      Sakaguchi, M.
    • Journal Title

      Biochem.Biophys.Res.Commun. 296

      Pages: 1-4

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of the signal that directs the C-tail anchored proteins to the mammalian mitochondrial outer membrane.2002

    • Author(s)
      Horie, C., Suzuki, H., Sakaguchi, M., Mihara, K.
    • Journal Title

      Mol.Biol.Cell 13

      Pages: 1615-1625

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Membrane topogenesis of the three amino-terminal transmembrane segments of glucose-6-phosphatase on endoplasmic reticulum.2002

    • Author(s)
      Ukaji, K., Ariyoshi, N., Sakaguchi, M., Hamasaki, N., Mihara, K.
    • Journal Title

      Biochem.Biophys.Res.Commun. 292

      Pages: 153-160

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Integration of Shaker-typeK+ channel, KAT1 into the endoplasmic reticulum membrane : Synergistic insertion of voltage sensing segments, S3-S4 and independent insertion of pore-forming segments, S5-P-S6.2002

    • Author(s)
      Sato, Y., Sakaguchi, M., Goshima, S., Nakamura, T., Uozumi, N.
    • Journal Title

      Proc.Natl.Acad.Sci.USA 99

      Pages: 60-65

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] 阪口 雅郎: "膜タンパク質のトポロジー形成:小胞体系と小胞体標的化回避"生化学. 75. 520-528 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kanki, T.et al.: "The N-terminal region of the transmembrane domain of human erythrocyte band3 : Residues critical for membrane insertion and transport activity"J.Biol.Chem.. 278. 5564-5573 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sato, Y.et al.: "Molecular dissection of the contribution of negatively and positively charged residues in S2, S3, and S4 to the final membrane topology of the voltage sensor in the K^+ channel, KAT1"J.Biol.Chem.. 278. 13227-13234 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Umigai, N.et al.: "Topogenesis of two transmembrane type K^+ channels, Kir2.1 and KcsA"J.Biol.Chem.. 278. 40373-40384 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nakamura, Y.et al.: "Targeting and assembly of mitochondrial tail-anchored protein Tom5 to the TOM complex depend on a signal distinct from that of tail-anchored proteins dispersed in the membrane"J.Biol.Chem.. 278. 41462-41471 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nakamura, Y.et al.: "Targeting and assembly of rat mitochondrial TOM22 into the TOM complex"J.Biol.Chem.. 279(in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sato, Y. et al.: "Integration of Shaker-typeK+channel, KAT1 into the endoplasmic reticulum membrane : Synergistic insertion of voltage sensing segments, S3-S4 and independent insertion of poreforming segments, S5-P-S6"Proc.Natl.Acad.Sci.USA. 99. 60-65 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ukaji, K. et al.: "Membrane topogenesis of the three amino-terminal transmembrane segments of glucose-6-phosphatase on endoplasmic reticulum"Biochem.Biophys.Rec.Commun.. 292. 153-160 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Horie, C. et al.: "Characterization of the signal that directs the C-tail anchored proteins to the mammalian mitochondrial outer membrane"Mol.Biol.Cell. 13. 1615-1625 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakaguchi, M.: "Autonomous and Heteronomous Positioning of Transmembrane Segments in Multispanning Membrane Protein"Biochem.Biophys.Res.Commun.. 296. 1-4 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Kanki, T. et al.: "The tenth membrane region of band 3 is initially exposed to the luminal side of the endoplasmic reticulum and then integrated into a partially folded band 3 intermediate"Biochemistry. 41. 13973-13981 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sato, Y. et al.: "Molecular dissection of the contribution of negatively and positively charged residues in S2, S3, and S4 to the final membrane topology of the voltage sensor in the K+channel, KAT1"J.Biol.Chem.. 276(in press). (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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